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Properties
| Property Name | Value |
|---|
| Product | serine threonine protein kinase |
| Orig transcript id | gnl|cribi|Naga_100076g14.8812.mrna |
| Orig protein id | gnl|cribi|Naga_100076g14.8812 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:292424..294774 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5986 ID=rna5986|Name=rna5986|organism=Nannochloropsis gaditana|type=mRNA|length=1660bp
GTCACTGACTCGCCCTCCTTGATCACATACACGCCCTGGTAGGTCTTTCG
TGAGAATGACAGCAAGCGTAGAACATGGGTGGGGGCACAAGTCCCTCGTC
TCCCGGATCATCGTCGCGTTCTTTGTCTTTAGTCTTCCTTCGGCGCAAAC
CGTGAAGCCCAGCACGGCTACGGAAGGGACAAGGGCCAGCACGACCGCCT
TTCAAAAGTACTACGCCAAGATGGTCGAGTCCCCGTCGCACGTATTGGAG
CTTGACGACAGCAAATTCGACGCCATGCTGATCAAGCCCGGTCAAAAACG
CAGTTTCCCCGTGGTGATCCTCTTCACGGCCGCCAACCCCAAATACGGGT
GCCAGGCTTGCCACATTGTCGGGAACGAGTTCGAAGGTATGGCCAACACC
TACCTGCAAAGGAACGCCCGTCGACCTAGCGACAATCAGCTGCCCCCCCT
TATCTTCGCGCGGGCCGACGTGGAGACAGCGCCGGCGGTTGTCCACGAGA
AGTTCCAGCTGCAAACGGTGCCACACCTGTTCTTCTTTCCCGCCCACCAG
GCCCTCTCCCTCCCGGCGCGCAATTTGGACGAACTGAGCGTGACAAGTGG
TGGCACGGCCATCGCGGAAGAGTTGGAGGATCGGATCGGCCTGACCCTGA
AGCGCGTCCCCAACGTGCGAGCGACTGTCAAGGGCGCAGTGCTCTTTGCC
GTCTTAGCGGCCGTGGCCGCCTATTTCCTGATGGACCAATGGTCCTGGAC
CAAAACGCTGCCCTTTCGACGCCCTCTCTGGTTGTGTTTCTCCTACCTGG
TCTTTGCCATTGCCACGGGCGGCATGATCTACTGCATAATCCGACGCCCC
CCGCCCTTCGGGATCACGCAGCAGAAGGTCAAATTGATCTCAACCCGCGA
CACTTCCGATATGTTCGTCTTTGAAGGACTCCTCATGGGATTCCTGCAGC
TTGCCGCTGGTCTTGCCTTCGTTCTTACTTACTTCTTCGCGTCTCGGAGA
CGTCAGACGCTTTTGCAATGGATTGGCATTAACTTGTCACTCGCGGCAGC
TCTATATTTCTTGCACCAAATCTTCGGGTTTTATTCGGAAAAGGCCCGGT
GGTACCGCATACAACACATTGTTGATCCTATGATGGCCAATTTTCTTTTC
GGGAATATGAAGAAAGGCAGCGGTTTATTTCGAAGGCTGGTGCGCCTGAC
ACAACTCTGGTTGTATGAATTTAAAGATCTGGTCAGCTTCAGACGTTCGG
CGATGTCATACCTGGGGAAGTACATAAAGCGCTTGGGAAAGTGAATCAGA
TGCACGCTTAGGAAGGACGTCTTTCAAAGTAAAAGCATGCATGGGGAACG
GCCGTGTTTTCATCAAGCTGAGGATGTGGTAGCAGCACCGGGGGAACGGG
AGGTGGGAAAAAACTATCAGCAGAAGCACACTTCGAAACACCCCGCGAAT
CAACCTGCTCGGACGTGACCGGCACCCGCAATGGGCATACCAGAATATTG
TCTTGATAAAAATATCCTCATTTTAGGTCGTAAAAGTATCAAAAGAAGTT
GTGAAAGCTGCTGTGTTTCGCGTCCGAATGATTTGAACGTTCAAAAATTT
GAATATCCGGTAGGGGTGACGCCATCGTTCCAGCCCGGTCAGGAAGATTA
TTCGTCTCTC back to topprotein sequence of rna5986 >rna5986-protein ID=rna5986-protein|Name=rna5986|organism=Nannochloropsis gaditana|type=polypeptide|length=592bp
MSPDLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPEN
ILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEDR
SRQEQEQGQASSQGSQKAPSQDGQATHSLFDVKLCDFGLCSSFVRGQFLK
DFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMA
AYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDP
AGRRGMEEIVTHPWVRLPGGEGFLTEGLEGSEAPFGSVTMSTHGTQMSGR
TRSLRVAGSSPLPEVLKKKAKPRGLASIQAKEAGREGATCQGEEEENGAG
VGMGEGVQGDGVQSFRPIDSDNHGAESDDHIVADSLLPLPSLPALFAIQE
QRSGATPSPPPPSLRSSLSHKVRQKMLEHKRTVHLPPLEPKTPALTTASR
RLWECGAGSLGGDEGRMEGADGKGEGEDRASPAYPASATVGARPVLSQLP
PLSPGVSGPRSSSGSSLSSSRSRDNSRHSSRSGDDVFEISHLPTLPTTEL
LQKKGQRTNAVESLRETEDAKQPTPLPPSPVSAKQSARVLPW back to topmRNA from alignment at CM002467.1:292424..294774+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5986 ID=rna5986|Name=rna5986|organism=Nannochloropsis gaditana|type=mRNA|length=2351bp|location=Sequence derived from alignment at CM002467.1:292424..294774+ (Nannochloropsis gaditana)
AAATTTAAGTTTTTCCatattccttcctccatctttatGCTCAAATGTCT
CCAGATCTTTTCGACTACATTGACGAAAGGGGGGATGCTCGCCTCCCGGT
GCCTGATTGCCAGACCCTAGCGCGTGCAGTGCTGAATGCGATTCACTACT
GCCACGCGCGAGGAGTGTGCCACCGGGATCTCAAGCCTGAGAACATATTG
CTGAAAACAGCCCACGACGAAAgcgaggggcgaggggaaatgaaggagca
gggcggcgggagagggagcgggctcGCACAGAGCCCCTCcggtggggaag
agaggtCGAGGCAGGAGCAGAGCCCCTCCGGTGGGGAAGACAGGTcgagg
caggagcaggaacagGGACAAGCTTCCAGCCAAGGCAGCCAGAAGGCGCC
GAGCCAGGACGGGCAAGCGACACACTCTCTGTTCGACGTCAAACTCTGCG
ACTTCGGActctgttcctcctttgtcCGCGGACAGTTTCTGAAGGATTTC
TGCGGCTCCCCCGGATTTTTCGCCCCGGAAATGATCACTCAGTCCATGGG
CTACGACGGGCCCAAGGCGGACTTGTGGAGCGTGGGGTGCATCCTTCTAG
AACTCAGCGTGGGTCACGACATCTTCTGCGAGGAGTGGATGGCCGCCTAC
GACTACGAGTTGCTGCATGATCCACCTGCCTTCGAGGCCAAGATGAGGGA
AAGCCTGCAAGAGATCGAGAGAACGATGCGTGAGCGACTGGACTTAGATC
CTATAATGATCGACTTTGTCTTGGGGCTCTTAGTCCTGGACCcggcggga
cggagaggaatggaggagatAGTGACGCATCCATGGGTAAGACTgccggg
gggagaaggctTTCTCACGGAGGGCCTAGAGGGAAGCGAGGCGCCCTTTG
GCAGTGTCACCATGTCGACGCACGGTACACAGATGAGCGGCAGGACACGG
AGCCTTCGGGTAGCGGGCTCCAGTCCCCTGCCCGAGGTGctgaaaaagaa
ggcgaagCCCAGGGGCTTAGCTAGCATCCAGGCCaaagaggcaggaagag
agggggccacgtgccagggggaggaggaggagaatggagCAGGGGTTGGG
ATGGGCGAAGGTGTTCAAGGAGACGGAGTGCAGTCCTTTCGACCCATTGA
CAGTGACAATCACGGGGCGGAAAGTGACGACCATATCGTGGCGGACAGTC
TTCTGCctttgccttctctccctgctcTCTTCGCCATTCAGGAGCAACGC
AGCGgagccaccccctccccacccccaccctccctccgtagCTCTCTCAG
CCACAAGGTGCGACAGAAGATGCTGGAACATAAGCGGACCGTCCATTTAC
CGCCCCTGGAACCCAAAACACCGGCATTGACCACTGCTTCGCGCCGCCTG
TGGGAGTGCGGGGCTGGATCGctcggaggagacgaaggtcGCATGGAAGG
GGCCGACgggaagggcgaaggagaggaccgGGCATCGCCTGCATACCCCG
CCTCGGCGACAGTGGGTGCTCGCCCCGTGCTCTCTCAACTCCCCCCGCTA
TCTCCAGGGGTGAGCGGCCCTCGAAGCAGCAGTGGCAGTAGCCTGAGCTC
AAGTCGGAGCAGAGATAACAGCCGCCATAGCAGCAGAAGCGGCGACGATG
TCTTTGAGATTTCTCACCTCCCAACCTTGCCGACGACGGAGCTTTTGCAG
AAAAAGGGACAACGTACCAATGCAGTTGAGTCACTCAGAGAGACTGAAGA
CGCAAAGCAAccaacccctctccctccctcgcccgtgtCCGCAAAGCAGA
GTGCACGAGTCCTCCCATGGTAGTGTGGCAacaggggaaagaaaggtttC
GAGAGAACGgcagtgggaaggagaaggtcgtACTCTGACTCGGCTCTTCC
AGATGTTCCCAGAGCGACTGCGACAAGGAGATCGAGGGTGAGCCCAAATG
TGCTGCGACAGAAAGACAcagcgtgggaggagggaaccAAGCATAAAGGA
AGCCAGCTGGGCTTGGCGGAGCATTCAGCAAGCGCCGAGACGATCGTGTC
GATGTTCAAACTCCAGCATTGAAGCAGATTGGAGACAAAGCCCTACCCCT
CCAGGAGAAAGAGCTTCAAGAAGTATTATGTCTTGTGAGCGGCTGTGTCA
GATATTGGGAAGATAGAGGATAGGACCGCAGGGGAACCGTGCATTCCCTT
GGTGAAATGATGTGATGAAGGGAATGAAGAACGGGTAGTAAGGGTAGCTG
GCTGTCAACTGCACGGTCTCTCACATACTCGGTAACGAAAGAAGACCGGT
GCAGTGAAAAAAAGGCCGCGGCCGCTATCGCACGAGGGGAAGGCCATCTA
C back to topCoding sequence (CDS) from alignment at CM002467.1:292424..294774+ >rna5986 ID=rna5986|Name=rna5986|organism=Nannochloropsis gaditana|type=CDS|length=1779bp|location=Sequence derived from alignment at CM002467.1:292424..294774+ (Nannochloropsis gaditana)
ATGTCTCCAGATCTTTTCGACTACATTGACGAAAGGGGGGATGCTCGCCT
CCCGGTGCCTGATTGCCAGACCCTAGCGCGTGCAGTGCTGAATGCGATTC
ACTACTGCCACGCGCGAGGAGTGTGCCACCGGGATCTCAAGCCTGAGAAC
ATATTGCTGAAAACAGCCCACGACGAAAgcgaggggcgaggggaaatgaa
ggagcagggcggcgggagagggagcgggctcGCACAGAGCCCCTCcggtg
gggaagagaggtCGAGGCAGGAGCAGAGCCCCTCCGGTGGGGAAGACAGG
TcgaggcaggagcaggaacagGGACAAGCTTCCAGCCAAGGCAGCCAGAA
GGCGCCGAGCCAGGACGGGCAAGCGACACACTCTCTGTTCGACGTCAAAC
TCTGCGACTTCGGActctgttcctcctttgtcCGCGGACAGTTTCTGAAG
GATTTCTGCGGCTCCCCCGGATTTTTCGCCCCGGAAATGATCACTCAGTC
CATGGGCTACGACGGGCCCAAGGCGGACTTGTGGAGCGTGGGGTGCATCC
TTCTAGAACTCAGCGTGGGTCACGACATCTTCTGCGAGGAGTGGATGGCC
GCCTACGACTACGAGTTGCTGCATGATCCACCTGCCTTCGAGGCCAAGAT
GAGGGAAAGCCTGCAAGAGATCGAGAGAACGATGCGTGAGCGACTGGACT
TAGATCCTATAATGATCGACTTTGTCTTGGGGCTCTTAGTCCTGGACCcg
gcgggacggagaggaatggaggagatAGTGACGCATCCATGGGTAAGACT
gccggggggagaaggctTTCTCACGGAGGGCCTAGAGGGAAGCGAGGCGC
CCTTTGGCAGTGTCACCATGTCGACGCACGGTACACAGATGAGCGGCAGG
ACACGGAGCCTTCGGGTAGCGGGCTCCAGTCCCCTGCCCGAGGTGctgaa
aaagaaggcgaagCCCAGGGGCTTAGCTAGCATCCAGGCCaaagaggcag
gaagagagggggccacgtgccagggggaggaggaggagaatggagCAGGG
GTTGGGATGGGCGAAGGTGTTCAAGGAGACGGAGTGCAGTCCTTTCGACC
CATTGACAGTGACAATCACGGGGCGGAAAGTGACGACCATATCGTGGCGG
ACAGTCTTCTGCctttgccttctctccctgctcTCTTCGCCATTCAGGAG
CAACGCAGCGgagccaccccctccccacccccaccctccctccgtagCTC
TCTCAGCCACAAGGTGCGACAGAAGATGCTGGAACATAAGCGGACCGTCC
ATTTACCGCCCCTGGAACCCAAAACACCGGCATTGACCACTGCTTCGCGC
CGCCTGTGGGAGTGCGGGGCTGGATCGctcggaggagacgaaggtcGCAT
GGAAGGGGCCGACgggaagggcgaaggagaggaccgGGCATCGCCTGCAT
ACCCCGCCTCGGCGACAGTGGGTGCTCGCCCCGTGCTCTCTCAACTCCCC
CCGCTATCTCCAGGGGTGAGCGGCCCTCGAAGCAGCAGTGGCAGTAGCCT
GAGCTCAAGTCGGAGCAGAGATAACAGCCGCCATAGCAGCAGAAGCGGCG
ACGATGTCTTTGAGATTTCTCACCTCCCAACCTTGCCGACGACGGAGCTT
TTGCAGAAAAAGGGACAACGTACCAATGCAGTTGAGTCACTCAGAGAGAC
TGAAGACGCAAAGCAAccaacccctctccctccctcgcccgtgtCCGCAA
AGCAGAGTGCACGAGTCCTCCCATGGTAG back to top
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