EWM24704.1, cds5971 (CDS) Nannochloropsis gaditana

Overview
NameEWM24704.1
Unique Namecds5971
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:292468..294246 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24704.1
Productserine threonine protein kinase
Orig transcript idgnl|cribi|Naga_100076g14.8812.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:292468..294246 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR020636Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|585106232|gb|EWM24704.1| (serine threonine protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 1196.42 bits (3094), Expect = 0.000e+0
Identity = 592/592 (100.00%), Postives = 592/592 (100.00%), Query Frame = 0 
Query:    1 MSPDLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEDRSRQEQEQGQASSQGSQKAPSQDGQATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPGGEGFLTEGLEGSEAPFGSVTMSTHGTQMSGRTRSLRVAGSSPLPEVLKKKAKPRGLASIQAKEAGREGATCQGEEEENGAGVGMGEGVQGDGVQSFRPIDSDNHGAESDDHIVADSLLPLPSLPALFAIQEQRSGATPSPPPPSLRSSLSHKVRQKMLEHKRTVHLPPLEPKTPALTTASRRLWECGAGSLGGDEGRMEGADGKGEGEDRASPAYPASATVGARPVLSQLPPLSPGVSGPRSSSGSSLSSSRSRDNSRHSSRSGDDVFEISHLPTLPTTELLQKKGQRTNAVESLRETEDAKQPTPLPPSPVSAKQSARVLPW 592
            MSPDLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEDRSRQEQEQGQASSQGSQKAPSQDGQATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPGGEGFLTEGLEGSEAPFGSVTMSTHGTQMSGRTRSLRVAGSSPLPEVLKKKAKPRGLASIQAKEAGREGATCQGEEEENGAGVGMGEGVQGDGVQSFRPIDSDNHGAESDDHIVADSLLPLPSLPALFAIQEQRSGATPSPPPPSLRSSLSHKVRQKMLEHKRTVHLPPLEPKTPALTTASRRLWECGAGSLGGDEGRMEGADGKGEGEDRASPAYPASATVGARPVLSQLPPLSPGVSGPRSSSGSSLSSSRSRDNSRHSSRSGDDVFEISHLPTLPTTELLQKKGQRTNAVESLRETEDAKQPTPLPPSPVSAKQSARVLPW
Sbjct:    1 MSPDLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEDRSRQEQEQGQASSQGSQKAPSQDGQATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPGGEGFLTEGLEGSEAPFGSVTMSTHGTQMSGRTRSLRVAGSSPLPEVLKKKAKPRGLASIQAKEAGREGATCQGEEEENGAGVGMGEGVQGDGVQSFRPIDSDNHGAESDDHIVADSLLPLPSLPALFAIQEQRSGATPSPPPPSLRSSLSHKVRQKMLEHKRTVHLPPLEPKTPALTTASRRLWECGAGSLGGDEGRMEGADGKGEGEDRASPAYPASATVGARPVLSQLPPLSPGVSGPRSSSGSSLSSSRSRDNSRHSSRSGDDVFEISHLPTLPTTELLQKKGQRTNAVESLRETEDAKQPTPLPPSPVSAKQSARVLPW 592
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|553185775|ref|XP_005854304.1| (cbl-interacting serine threonine-protein kinase 9 [Nannochloropsis gaditana CCMP526] >gi|422294756|gb|EKU22056.1| cbl-interacting serine threonine-protein kinase 9 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0
Identity = 261/270 (96.67%), Postives = 262/270 (97.04%), Query Frame = 0 
Query:    4 DLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEDRSRQEQEQGQASSQGSQKAPSQDGQATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPGGEGF 273
            DLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGE+RSRQEQEQGQASSQGSQKAPSQDG ATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQ IERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPW   P G G 
Sbjct:  451 DLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEERSRQEQEQGQASSQGSQKAPSQDGHATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQGIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWDTEPSGSGL 720
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|566033022|gb|ETI55933.1| (CAMK/CAMKL/SNRK protein kinase [Phytophthora parasitica P1569])

HSP 1 Score: 115.546 bits (288), Expect = 1.370e-23
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMR-ERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPG 269
            VKL DFGLC+       L DFCGSPGFFAPE++    GYDG KAD+WS+GCILLEL +G+ +F   WM+ YD  +L +P  F   ++ +L ++              +   ++G+L  +P  R  + +++ HPW+ + G
Sbjct:  323 VKLIDFGLCTKATTE--LHDFCGSPGFFAPELLLHD-GYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYDISILKEPKTFGECVKAALTQMRDFCNGSEWKYSAKLRSALVGMLCENPTERLSIHQVLAHPWLTVEG 458
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|570997318|gb|ETP53731.1| (CAMK/CAMKL/SNRK protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 115.546 bits (288), Expect = 1.537e-23
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMR-ERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPG 269
            VKL DFGLC+       L DFCGSPGFFAPE++    GYDG KAD+WS+GCILLEL +G+ +F   WM+ YD  +L +P  F   ++ +L ++              +   ++G+L  +P  R  + +++ HPW+ + G
Sbjct:  324 VKLIDFGLCTKATTE--LHDFCGSPGFFAPELLLHD-GYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYDISILKEPKTFGECVKAALTQMRDFCNGSEWKYSAKLRSALVGMLCENPTERLSIHQVLAHPWLTVEG 459
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|970638231|gb|KUF81844.1| (SNF-related serine/threonine-protein kinase [Phytophthora nicotianae])

HSP 1 Score: 115.546 bits (288), Expect = 1.576e-23
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLD-----LDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPG 269
            VKL DFGLC+       L DFCGSPGFFAPE++    GYDG KAD+WS+GCILLEL +G+ +F   WM+ YD  +L +P  F   ++ +L +    MR+  +         +   ++G+L  +P  R  + +++ HPW+ + G
Sbjct:  322 VKLIDFGLCTKATTE--LHDFCGSPGFFAPELLLHD-GYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYDISILKEPKTFGECVKAALTQ----MRDFCNGSEWRYSAKLRSALVGMLCENPTERLSIHQVLAHPWLTVEG 457
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|570336715|gb|ETO84663.1| (CAMK/CAMKL/SNRK protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 115.546 bits (288), Expect = 1.644e-23
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLD-----LDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPG 269
            VKL DFGLC+       L DFCGSPGFFAPE++    GYDG KAD+WS+GCILLEL +G+ +F   WM+ YD  +L +P  F   ++ +L +    MR+  +         +   ++G+L  +P  R  + +++ HPW+ + G
Sbjct:  323 VKLIDFGLCTKATTE--LHDFCGSPGFFAPELLLHD-GYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYDISILKEPKTFGECVKAALTQ----MRDFCNGSEWRYSAKLRSALVGMLCENPTERLSIHQVLAHPWLTVEG 458
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|675180049|ref|XP_008898909.1| (CAMK/CAMKL/SNRK protein kinase [Phytophthora parasitica INRA-310] >gi|568100646|gb|ETN15336.1| CAMK/CAMKL/SNRK protein kinase [Phytophthora parasitica INRA-310])

HSP 1 Score: 115.161 bits (287), Expect = 1.861e-23
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLD-----LDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWVRLPG 269
            VKL DFGLC+       L DFCGSPGFFAPE++    GYDG KAD+WS+GCILLEL +G+ +F   WM+ YD  +L +P  F   ++ +L +    MR+  +         +   ++G+L  +P  R  + +++ HPW+ + G
Sbjct:  324 VKLIDFGLCTKATTE--LHDFCGSPGFFAPELLLHD-GYDGCKADVWSIGCILLELVLGNTLFSSIWMSMYDISILKEPKTFGECVKAALTQ----MRDFCNGSEWRYSAKLRSALVGMLCENPTERLSIHQVLAHPWLTVEG 459
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|673051355|ref|XP_008879638.1| (CAMK/CAMKL protein kinase [Aphanomyces invadans] >gi|574464667|gb|ETV91712.1| CAMK/CAMKL protein kinase [Aphanomyces invadans])

HSP 1 Score: 112.849 bits (281), Expect = 1.141e-22
Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = 0 
Query:  126 THSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPW 264
            TH  + VK+ DFGLC+  V    L DFCGSPGFFAPEM+     YDG KAD+WS+GCILLEL +G+  F + WM AY  ++L D   F+  ++ ++  +   +             +  +L  D A R  + +I  HPW
Sbjct:  375 THDNYMVKIVDFGLCAK-VGTAPLYDFCGSPGFFAPEMLLHDQ-YDGQKADVWSIGCILLELVLGNTFFLKTWMTAYHLDVLSDRAHFQKLVQTNVTAMHTALASNESYSSEAKSLLKSMLCEDAATRPTIFDIAEHPW 511
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|698814160|ref|XP_009840109.1| (CAMK/CAMKL protein kinase [Aphanomyces astaci] >gi|574104870|gb|ETV70397.1| CAMK/CAMKL protein kinase [Aphanomyces astaci])

HSP 1 Score: 111.309 bits (277), Expect = 3.947e-22
Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 0 
Query:  126 THSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPW 264
            TH  + VK+ DFGLC+  V    L DFCGSPGFFAPEM+     YDG KAD+WS+GCILLEL +G+  F + WM AY  ++L D   F+  + E++  + R + +           +  +L  D   R  + ++  HPW
Sbjct:  374 THDNYMVKIVDFGLCAK-VGTTPLTDFCGSPGFFAPEMLLHDQ-YDGQKADVWSIGCILLELLLGNTFFLKTWMTAYHLDVLGDRTHFDTLLHENVAAMHRAVADAA-YSAHAKALLQAMLTEDAENRPTIYDVAEHPW 509
[Close]
BLAST of EWM24704.1 vs. NCBI_GenBank
Match: gi|1173929180|gb|OQR82461.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 110.153 bits (274), Expect = 6.494e-22
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 0 
Query:  132 VKLCDFGLCSSFVRG--QFLKDFCGSPGFFAPEMITQSMGYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQEIERTMR---ERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTH 262
            VK+ DFGLC+   RG  + L DFCGSPGFFAPE++     YDG KAD+WS+GCILLEL +G+  F   WMAAY  ++L D   F   + ++L ++   +R    +L  D I  D +L +LV +P  R  + ++  H
Sbjct:  313 VKVVDFGLCTKVSRGSSKKLGDFCGSPGFFAPEILLHE-TYDGFKADVWSLGCILLELVLGNSFFLSIWMAAYHLDVLGDRSLFRQTVHQNLAKMAEALRGPSMQLYSDAIK-DLLLCMLVENPKERLSIADVYDH 446
The following BLAST results are available for this feature:
BLAST of EWM24704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106232|gb|EWM24704.1|0.000e+0100.00serine threonine protein kinase [Nannochloropsis g... [more]
gi|553185775|ref|XP_005854304.1|0.000e+096.67cbl-interacting serine threonine-protein kinase 9 ... [more]
gi|566033022|gb|ETI55933.1|1.370e-2339.57CAMK/CAMKL/SNRK protein kinase [Phytophthora paras... [more]
gi|570997318|gb|ETP53731.1|1.537e-2339.57CAMK/CAMKL/SNRK protein kinase [Phytophthora paras... [more]
gi|970638231|gb|KUF81844.1|1.576e-2339.86SNF-related serine/threonine-protein kinase [Phyto... [more]
gi|570336715|gb|ETO84663.1|1.644e-2339.86CAMK/CAMKL/SNRK protein kinase [Phytophthora paras... [more]
gi|675180049|ref|XP_008898909.1|1.861e-2339.86CAMK/CAMKL/SNRK protein kinase [Phytophthora paras... [more]
gi|673051355|ref|XP_008879638.1|1.141e-2240.29CAMK/CAMKL protein kinase [Aphanomyces invadans] >... [more]
gi|698814160|ref|XP_009840109.1|3.947e-2240.29CAMK/CAMKL protein kinase [Aphanomyces astaci] >gi... [more]
gi|1173929180|gb|OQR82461.1|6.494e-2243.38protein kinase [Achlya hypogyna][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5986rna5986Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications