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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100180g10.4040.mrna |
| Orig protein id | gnl|cribi|Naga_100180g10.4040 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:242146..244379 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5969 ID=rna5969|Name=rna5969|organism=Nannochloropsis gaditana|type=mRNA|length=1266bp
TATGCATGTCTTGATTGCACCCTCATGGTATTTTGCCGTCCCTTTGCTAT
GCACAGGTGCTCCTTGACGCAAATACTAAGAAAGATACATAGTCTTTGAG
CACAGGACTGCCCTGATACATGGTTTTCTTCTCCTGTGAAGGCTGCAACG
AGACTCTTAAGAAGGCACAGGTAGAGAGCCATCTGCGTCGTGCACTGTGC
TCCCGTTACCCAGTATCGTGTGTCGACTGCAGCCAGGTTTTTCCAGGGTC
GTCCTACCAGGCACATACCTCATGCATTTCCGAGGCGGAAAAATATGAGA
AATCTCTCTACAAGGGCCCCAAAGCCGGAAATAAAGGCGGTAAAGGAAAG
AAGCGAAACCCTCAAGAAGAATGGATGGAAATGATTGCCTCTGTGGCTTG
TGATAACAGTGAGACTGGAGGTGTGAACTCTATCCTTCGCCGGCATTTAT
CCCGAATGGCTGAGTTGGGTAACGTCCCCCGCAACGAGAAAAAATTCAAG
AACTTCTTGAACAACAGTTTAAGGATAAATCGCTCAAATGAGCAAGATGA
GCTTTGGAAGTACTTGAAGGGGAAAATGGATGAAAACAAGCCTGCCGCAG
AGGCACCCTCGGGTCAGGTAATGGCGGACAAGGCAGAGGAGGGAAAGAAG
GAGGGCACAACCCGGACGATGAGGGCGGCCTCTAAACCTGAGGACGATGG
GCAAGTATCCAGTCCATCGACTGACAAGATAGAAAAAGGATTTGAAAAAG
GCGAAAAGAAGCGGAAAAAAAAAAGGACGAAAAAAAGGAGACAGGCAGAG
CGGAGCAGGAGCCTGCCACCCCGCAGCATGAGCACAAGAAGCGAAAGAAA
GATAAGGCTGAGGCGGCAGCGAGCGTAACAAATGGAGCGAGACAGAAAGA
GAAGAATGAGTGTCCAAATATGTCCACAAGCGCAGTGGGGTGCACTTTCG
CATGGGGAAAAGTAATCAAGAAAGTAGTCAAGAAAGCCCCGGGAAGGAGG
ATTGATCGACATCTTCTTCGGGGCCAAGTCCTTACCATAGCGGCAGAACA
AGTGGTGGGAGACAAAAAGGAAATGAAAAAAGCCTTCAAAGAAGTGTTAG
GCGGGGGCATTCCGGGTTTACAAGTCAATGGAAACGAAGTCATGTACATT
AAACAGCAATGATATTGGCGGTTAGGGAACATTGCGTCAAAAGCACCAAA
CACAGAGACTGAGGTACATTATTCCATCGAAATTTGAACCTTACAACAAG
ATAACAATATTTATTG back to topprotein sequence of rna5969 >rna5969-protein ID=rna5969-protein|Name=rna5969|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MPQRGTPPPVVLRRPIIGVMGSGREPHVGLSAPLGSWLASTGCNLLTGGG
RGVMECVSRTFSETPGREGQIIGVIPALPGASNEDSVIPPAGYPNPYTEI
VIRTQCPLSMHPLTGTELTSRNHINILSSDIVVALPGSSGTWSEIQLAIR
YRKPLILFLGEDGDDIDLAMDGVEDIKVAKSMGEVRLYVEEALERRRLRA
TSQPPLFASSSSYSSSSSPNAGAAAGEKSNGTAMSGEEGEREGGVEKGRL
GEEESTGHLLVKATAEGQPGKREEEGGERQEEKGGKDGRGEVRRREEPVS back to topmRNA from alignment at CM002467.1:242146..244379+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5969 ID=rna5969|Name=rna5969|organism=Nannochloropsis gaditana|type=mRNA|length=2234bp|location=Sequence derived from alignment at CM002467.1:242146..244379+ (Nannochloropsis gaditana)
TAGTCGCTTTCTCCACGCGTTTTTGCTCTTCGACGTCGAAACTGTGACCG
TCCCACACTTCCAGTAATAAAATCTGTCATGAAATTTCTTCGTTACTACA
CTTCATACTAGGCCGCAAGCTACGGCGTGCcgtttcccgccctctccccc
tccctccctcctcctcctactgccggcctctcctttcgGCACCGCCTTAC
GCTAGCACCATGCCACAAAGGGGAACTCCACCGCCTGTAGTTTTGCGCCG
ACCGATAATTGGCGTCATGGGTTCTGGAAGGGAGCCTCACGTAGGCCTTT
CGGCGCCGTTGGGCTCTTGGCTGGCATCCACGGGCTGTAACCTTCTGACt
ggcgggggcagaggggtGATGGAGTGCGTCTCGCGAACCTTCTCCGAGAC
CCCGGGCCGAGAGGGACAGATAATAGGCGTAATTCCTGCCTTGCCTGGGG
CTTCGAACGAGGATAGTGTCATCCCGCCGGCAGGTAGGTGGCAagttggg
gagggagtgccaagggagggagggaaacatgTGTGATGGCGaagcgagag
gaaggcggtcTATATCGACGCGATGCTGATAGTGACGTCGAGGATGTGGG
GAGTTGGGGCAGAGGAACGTCATAATATGTGACAATGTAGCCCTAGGATG
CACGCATGGTGTCGTTGGGCGCAGGGTGAACCGCACGCGGGCTTCCGCCC
GTCCAAGTAGTGaacctcccaccttcctccccgccccccaggCTACCCAA
ACCCGTACACCGAGATCGTCATCCGCACTCAATGCCCCCTCTCCATGCAC
CCTCTGACCGGGACGGAGCTCACGTCCCGGAACCACATCaacatcctctc
ctccgacaTCGTTGTGGCCCTTCCCGGCTCGTCAGGGACCTGGAGCGAGA
TCCAGCTGGCGATCCGGTACGGtggttttccctccctccttccctccttc
cctcttccctttcctctctctcgccctctctctccccctccctgtcctcc
cctgtTGAAAGCGGCGTGGGTGAGGAGAAGCTGCCACACTGCTCGGTGCG
CCGCTCGCCAGTCCGCCTGTCACTTGACTCCCACCCCGCGGTTTTCCGGA
CAATTCAAAAACCCGTAACTTCCCCCTCGGACCCTCCGACAGATACCGGA
AGCCGCTCATTTTGTtcctgggcgaggacggcgacgatATCGATCTTGCC
ATGGATGGGGTCGAGGACATCAAGGTGGCCAAGTCCATGGGGGAGGTCCG
CCTCtatgtggaggaggctttggaaCGACGTCGCCTTCGCGCCACCTCCC
AGCCCCcgctcttcgcctcctcttcctcctattcttcctcctcctccccc
aacgCGGGCGCGGCGGCCGGAGAGAAATCGAACGGGACCGCGATgagtgg
cgaggaaggagagagggaaggaggtgtggaaaaggggaggttgggggagg
aagagagcacGGGTCACCTCCTCGTGAAGGCAACAGCCGAAGGACAGcct
gggaagagggaggaggaggggggggaaagacaggaggagaagggagggaa
ggacgggaggggggaagtaAGAAGGCGAGAGGAGCCTGTGTcctgagaag
ggggaggcaggggcgacggagggggagtggaTGTGGTCGGAAGAGGGTAG
CGGCACGCATTGTAGGAAGAGGGTAGCGGCACGCATTGTAACATGTTTTG
ACATTCAAGGTGGAGTGGATCGTCCATGCTTgaaacgggagggaggccgg
ggaagaaggagagcggaCGTGTTGAAGTGGGATGATGGAtccggaggggg
agcggaggcggtggcaggTGGGACaggggcaaagaggaggcaagaggcag
gaaaggaggaggaggaggaggagagtcgTCGTTTGCCCGGGTCCCTCCAG
GCTCTGgatggggggcgggggaggaggattgcctcggggggcggagagag
ggaggaggcggtggcggaggaggaaggcttagggaggtcaggagggagaa
ggggaaggagggaggtactGCTACGCAAggagcgtgggagggagggaggg
agggagggagggagggagggagggaaggagggagggaaggagggagggag
gggagggagggaaagagggagggaacgatgGAGAGAtgccccccaaaaaa
agcgaCAAGGGCTTGCAGAGACCCACTCACAAATTAAAAAGATACGAATC
CCAAAGAATACCTTGGCTCGTGACAGTCACCTTA back to topCoding sequence (CDS) from alignment at CM002467.1:242146..244379+ >rna5969 ID=rna5969|Name=rna5969|organism=Nannochloropsis gaditana|type=CDS|length=2709bp|location=Sequence derived from alignment at CM002467.1:242146..244379+ (Nannochloropsis gaditana)
ATGCCACAAAGGGGAACTCCACCGCCTGTAGTTTTGCGCCGACCGATAAT
TGGCGTCATGGGTTCTGGAAGGGAGCCTCACGTAGGCCTTTCGGCGCCGT
TGGGCTCTTGGCTGGCATCCACGGGCTGTAACCTTCTGACtggcgggggc
agaggggtGATGGAGTGCGTCTCGCGAACCTTCTCCGAGACCCCGGGCCG
AGAGGGACAGATAATAGGCGTAATTCCTGCCTTGCCTGGGGCTTCGAACG
AGGATAGTGTCATCCCGCCGGCAGgCTACCCAAACCCGTACACCGAGATC
GTCATCCGCACTCAATGCCCCCTCTCCATGCACCCTCTGACCGGGACGGA
GCTCACGTCCCGGAACCACATCaacatcctctcctccgacaTCGTTGTGG
CCCTTCCCGGCTCGTCAGGGACCTGGAGCGAGATCCAGCTGGCGATCCGA
TACCGGAAGCCGCTCATTTTGTtcctgggcgaggacggcgacgatATCGA
TCTTGCCATGGATGGGGTCGAGGACATCAAGGTGGCCAAGTCCATGGGGG
AGGTCCGCCTCtatgtggaggaggctttggaaCGACGTCGCCTTCGCGCC
ACCTCCCAGCCCCcgctcttcgcctcctcttcctcctattcttcctcctc
ctcccccaacgCGGGCGCGGCGGCCGGAGAGAAATCGAACGGGACCGCGA
Tgagtggcgaggaaggagagagggaaggaggtgtggaaaaggggaggttg
ggggaggaagagagcacGGGTCACCTCCTCGTGAAGGCAACAGCCGAAGG
ACAGcctgggaagagggaggaggaggggggggaaagacaggaggagaagg
gagggaaggacgggaggggggaagtaAGAAGGCGAGAGGAGCCTGTGTcc
tgaATGCCACAAAGGGGAACTCCACCGCCTGTAGTTTTGCGCCGACCGAT
AATTGGCGTCATGGGTTCTGGAAGGGAGCCTCACGTAGGCCTTTCGGCGC
CGTTGGGCTCTTGGCTGGCATCCACGGGCTGTAACCTTCTGACtggcggg
ggcagaggggtGATGGAGTGCGTCTCGCGAACCTTCTCCGAGACCCCGGG
CCGAGAGGGACAGATAATAGGCGTAATTCCTGCCTTGCCTGGGGCTTCGA
ACGAGGATAGTGTCATCCCGCCGGCAGgCTACCCAAACCCGTACACCGAG
ATCGTCATCCGCACTCAATGCCCCCTCTCCATGCACCCTCTGACCGGGAC
GGAGCTCACGTCCCGGAACCACATCaacatcctctcctccgacaTCGTTG
TGGCCCTTCCCGGCTCGTCAGGGACCTGGAGCGAGATCCAGCTGGCGATC
CGATACCGGAAGCCGCTCATTTTGTtcctgggcgaggacggcgacgatAT
CGATCTTGCCATGGATGGGGTCGAGGACATCAAGGTGGCCAAGTCCATGG
GGGAGGTCCGCCTCtatgtggaggaggctttggaaCGACGTCGCCTTCGC
GCCACCTCCCAGCCCCcgctcttcgcctcctcttcctcctattcttcctc
ctcctcccccaacgCGGGCGCGGCGGCCGGAGAGAAATCGAACGGGACCG
CGATgagtggcgaggaaggagagagggaaggaggtgtggaaaaggggagg
ttgggggaggaagagagcacGGGTCACCTCCTCGTGAAGGCAACAGCCGA
AGGACAGcctgggaagagggaggaggaggggggggaaagacaggaggaga
agggagggaaggacgggaggggggaagtaAGAAGGCGAGAGGAGCCTGTG
TcctgaATGCCACAAAGGGGAACTCCACCGCCTGTAGTTTTGCGCCGACC
GATAATTGGCGTCATGGGTTCTGGAAGGGAGCCTCACGTAGGCCTTTCGG
CGCCGTTGGGCTCTTGGCTGGCATCCACGGGCTGTAACCTTCTGACtggc
gggggcagaggggtGATGGAGTGCGTCTCGCGAACCTTCTCCGAGACCCC
GGGCCGAGAGGGACAGATAATAGGCGTAATTCCTGCCTTGCCTGGGGCTT
CGAACGAGGATAGTGTCATCCCGCCGGCAGgCTACCCAAACCCGTACACC
GAGATCGTCATCCGCACTCAATGCCCCCTCTCCATGCACCCTCTGACCGG
GACGGAGCTCACGTCCCGGAACCACATCaacatcctctcctccgacaTCG
TTGTGGCCCTTCCCGGCTCGTCAGGGACCTGGAGCGAGATCCAGCTGGCG
ATCCGATACCGGAAGCCGCTCATTTTGTtcctgggcgaggacggcgacga
tATCGATCTTGCCATGGATGGGGTCGAGGACATCAAGGTGGCCAAGTCCA
TGGGGGAGGTCCGCCTCtatgtggaggaggctttggaaCGACGTCGCCTT
CGCGCCACCTCCCAGCCCCcgctcttcgcctcctcttcctcctattcttc
ctcctcctcccccaacgCGGGCGCGGCGGCCGGAGAGAAATCGAACGGGA
CCGCGATgagtggcgaggaaggagagagggaaggaggtgtggaaaagggg
aggttgggggaggaagagagcacGGGTCACCTCCTCGTGAAGGCAACAGC
CGAAGGACAGcctgggaagagggaggaggaggggggggaaagacaggagg
agaagggagggaaggacgggaggggggaagtaAGAAGGCGAGAGGAGCCT
GTGTcctga back to top
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