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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100180g3.4038.mrna |
| Orig protein id | gnl|cribi|Naga_100180g3.4038 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:217977..219527 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5963 ID=rna5963|Name=rna5963|organism=Nannochloropsis gaditana|type=mRNA|length=2010bp
CCTCGATATTTTGTCACAACTTTTCTACAGAATGAAAAGGAAGATGGACA
TGGAAATCACCACTGTTGCCAAGCCGAGCAATGATTACACAGCCACCAGC
ATGCACGTGGGCAGCGAAGCTGTCGGGGAGACTGCTGCCGGTAACACTCA
GAGGGAAGGAAGTAGCCTCCCGACGATGCCCATCATTGATCCCTCTTCCG
GACAAGCAACGCACTCAAAGTGTGAATCAATGTCGCAATGTAGGATGGGC
GACAAGAATGAAAGCCGGCAGGCGGAGGGTGAAAGGGCGAGGGAGAGCGA
GGAGGGTGCCTGCGATGACGGCATGACCGACATGGACAACCTCTTGCTCC
GTCCCAGTCCTTTCGCGGCGGACTCAGGCTCGTTGGCTTTGGGGGAATTC
GAGGCCGGGGCGGATCTGAAGGAGATGCTTGCTGAGGCGCGCGTGCTTGT
CGTGGGGGCTGGAGGGCTGGGGTGTGAGATATTGAAGAATTTGGCCTTGT
CCGGAGTGAAGGATATAGACCTCATCGACCTGGACACGGTCGAGCTCTCC
AATTTGAACCGGCAGTTTCTTTTCCGGGAAAAAGACATAGGTCAACCCAA
AGCTGTGGTAGCGGCCAAGTTCATCATGGAACGAGTCCCGGGGGTCAGGG
TGCGCCCGCATCATGGAAAAATTCAGGACAAGGACGCAGCATTCTATAAG
CAATTTTCCATCGTTATCGCAGGCCTCGACAATATCAAAGCCCGCATCTG
GCTCAACAGCACCCTCTTCTCCCTCGCCGAGAGGTCCGAAAGCAGCGAAA
AAGACGACTCGGTTCCCCCCTACGACCTCGCCACCGTCATCCCCCTGGTC
GACGGCGGCACCGAGGGTTTCCAGGGTCAGGCCCGCGTCATCCTCCCTGG
ACTGACCGCCTGCTTCCACTGCACCCTCGACCTCTTCCCCCCCGCCCAAT
CCTTCCAACTCTGCACCTTGGCGGACACGCCACGGCAACCGGAGCATTGC
GTCGCCTACGCCCAGATATTGCTCTGGCCGGAGGCACACCCAGAGGGCAC
GGTGTTGGATCCGGATATCCCCGAGCACGTGGCATGGGTGTGGGGGAAGG
CGAAGGAGCGCGCGCGGCAGTTTGGCATCGAAGGGATCACATACCGGTTG
ACCTTGGGTGTGATCAAGAACATCATCCCCGCCGTTGCCAGCACCAATGC
GGTGGTGGCCGCGGTCAGTGTCAACGAGGCCATCAAAATTTTGACCTTCA
TGTCCCAGGTCATGAACAATTACATGATGTATCAAGGACCCGAAGGCATC
TACACATACACGACCGCGCATCAGCGCAAGGACGACTGTTTAGTGTGCGG
CTCGCGCGAGACCCATCTCTCGATCGCCCCCACCCTTCTCCTCTCCGACG
TCCTCCACCTCCTAAAGTCAAACGCATCCCTCCAACTCACCGCTCCCTCC
CTAACGTGCGGAAATAAAGTCCTTTACATGCAAAGACCACCTGCCCTCGA
AGCGGCGACAAGAGAAAACCTTTCCAAGAAGATTAGCGAGCTTCTTCCCC
TGTCTGGGGAGGCGTTAAGCGTCACCGATCCGAGCGTCAATCAGCCGGTG
ACGGTGATCTTGAAATACGAGTAGTGCAAATGCATGAAATATGGGGATCA
CGAGTCTAAATTCAGATTGATACAGCAAGTACAATCATTCTCTCCCTTTT
GCATCAAAAATATATTACATGTCCAGCTTAATTAGAGTTAGTGTAGGTTT
AGGGCTAGGGTCGGGGTTGTTGCTAGATCCAGCGAGTCGGTAAGCCTCAG
CCTGGTAATGCTCATGACAAGGCACAGGGATGACAAGATATGTACCACTG
GGGTGAGTGGGCTTACCATATAAACGAAACGGCATTACATTCGATTTTAA
ACGAAGGCACGAAATACAGAAAGCAAAATAAACGTCGAAGGGCAAAACAG
TCAGCATCATCAGTCATGGACACATAATCAACGACTTCTCTTACAGAAAG
AAATGTTTCC back to topprotein sequence of rna5963 >rna5963-protein ID=rna5963-protein|Name=rna5963|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MMTRKEKHRIYLCRDSLRWRGQAVTATLLCFFNMFPPTTKAIFTHPCPSA
IAFGLCRGQGHQQHQHVPPRRDHQSIACSSSTLAVASPQRFQAWKHFSRL
PSLRATDSTSPSSPPPPPSSSNRDAEALRRQRILAMQNEIVEEILLASDE
EREKADAAKRALRQSTRRAIYEAYSQVGGEVNISEIGIPKKMTRMPKRAF
ADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVS
YGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYR
DFVQVIPALVGFSTYQVASFLQAFDTQDVTDKNG back to topmRNA from alignment at CM002467.1:217977..219527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5963 ID=rna5963|Name=rna5963|organism=Nannochloropsis gaditana|type=mRNA|length=1551bp|location=Sequence derived from alignment at CM002467.1:217977..219527+ (Nannochloropsis gaditana)
ATCAACATGAATTGTCCGTAGTAATTGCGCATGCCTCGCATGCTGCCCCC
TGCTACATATCTCGCTTCGCGAAGTATCCTATTAACcatgcctttccctt
ccataTTTACAAATACAAAACCCAACAGTGATtgatgatgacgaggaaag
aaaagcataGGATATACTTATGCCGTGACAGCTTGAGATGGAGGGGCCAG
GCCGTGACAGCGACGTTGCTGTGCTTCTTCAACAtgttccctcccaccac
caaGGTAAGGTGCCTTAGAGGGAAAGGCTTTTAGGTAGCGTGCTTCGTAG
TCATTGAATGTGGATCGTATAAAGAGGATAGAGGCATCATTTCCCTTTGC
GATTCTCTCGTTGTTTTCTGTCTTGACTGCCGAGCGGAATCCCACGTAGT
TCACGATGGTCGGAACCATCTGATGGCGATGATTTAGCGGTGTGTGTACA
AGCACAACCCTGTTAGTCGGGGGTTGATTCAAAACTTGAACGCTCACGCA
TGCTCCTCAACAAATTGCGAGTCGCTAATGCTGTGTTCGTGCCCGCAGGC
CATTTTTACACACCCATGTCCCTCGGCGATTGCTTTTGGATTGTGTCGCG
GTCAGGGGCATCAGCAGCATCAGCACGTGCCCCCAAGACGCGACCACCAA
TCCATAGCATGCTCCTCATCGACCTTAGCCGTTGCATCCCCACAACGCTT
TCAAGCGTGGAAACACTTCAgccgtctcccttcccttcgtgcCACCGACT
CTAccagtccttcttcccctccaccacctccttcctcctccaatcggGAC
GCAGAAGCCTTACGCCGCCAGCGAATCCTAGCGATGCAGAACGAGATTGT
GGAGGAAATCTTGTTGGCCAGCGACGAAGAACGGGAGAAGGCCGACGCGG
CCAAACGGGCCCTCCGACAGTCGACTCGCAGGGCCATCTATGAAGCCTAC
AGTCAagtggggggagaggtgaATATAAGCGAGATCGGGatccccaaaaa
aatgacgcGCATGCCCAAGCGTGCGTTCGCGGATGAAGAGGCGCGGAAGA
AAGAAGCCATCTCCCGAGGGAAACCGTACGCAGTGCGCAAATTTCAGCTC
CTCTTTGACAGCATTTGGCTCTCAGCAATAGGACTGGCACTGTGCTgggc
cgctttctccctgcAGACTTCCGTGTCGTATGGTTTGGGGGCTGTGTTGG
GCTTCGGGTACATCACTTTGTTAGGGCGCACGGTGGAAGCGATGGGCACT
GCCGGGCCAGGAGCAGGGGTGGGCCAAGCTCGGTTCGCTATGGTCATTTT
GCTGGTGTTGATTGCGGGGAAGTACCGTGATTTCGTACAAGTAATACCAG
CTCTTGTGGGCTTCTCCACCTACCAAGTAGCATCGTTTCTACAGGCATTT
GATACACAGGACGTGACTGACAAAAACGGGTGACCAGGTTGAAGGGCAGA
TATGTCACATCTCGGTAACGAAACCATCTAGGTCACGAAATGTACAGCGG
TGATGAAAAGTCAGAGTTGAATGCAAAAGAAATAAAGGATGCATTTTCAT
C back to topCoding sequence (CDS) from alignment at CM002467.1:217977..219527+ >rna5963 ID=rna5963|Name=rna5963|organism=Nannochloropsis gaditana|type=CDS|length=2010bp|location=Sequence derived from alignment at CM002467.1:217977..219527+ (Nannochloropsis gaditana)
atgatgacgaggaaagaaaagcataGGATATACTTATGCCGTGACAGCTT
GAGATGGAGGGGCCAGGCCGTGACAGCGACGTTGCTGTGCTTCTTCAACA
tgttccctcccaccaccaaGGCCATTTTTACACACCCATGTCCCTCGGCG
ATTGCTTTTGGATTGTGTCGCGGTCAGGGGCATCAGCAGCATCAGCACGT
GCCCCCAAGACGCGACCACCAATCCATAGCATGCTCCTCATCGACCTTAG
CCGTTGCATCCCCACAACGCTTTCAAGCGTGGAAACACTTCAgccgtctc
ccttcccttcgtgcCACCGACTCTAccagtccttcttcccctccaccacc
tccttcctcctccaatcggGACGCAGAAGCCTTACGCCGCCAGCGAATCC
TAGCGATGCAGAACGAGATTGTGGAGGAAATCTTGTTGGCCAGCGACGAA
GAACGGGAGAAGGCCGACGCGGCCAAACGGGCCCTCCGACAGTCGACTCG
CAGGGCCATCTATGAAGCCTACAGTCAagtggggggagaggtgaATATAA
GCGAGATCGGGatccccaaaaaaatgacgcGCATGCCCAAGCGTGCGTTC
GCGGATGAAGAGGCGCGGAAGAAAGAAGCCATCTCCCGAGGGAAACCGTA
CGCAGTGCGCAAATTTCAGCTCCTCTTTGACAGCATTTGGCTCTCAGCAA
TAGGACTGGCACTGTGCTgggccgctttctccctgcAGACTTCCGTGTCG
TATGGTTTGGGGGCTGTGTTGGGCTTCGGGTACATCACTTTGTTAGGGCG
CACGGTGGAAGCGATGGGCACTGCCGGGCCAGGAGCAGGGGTGGGCCAAG
CTCGGTTCGCTATGGTCATTTTGCTGGTGTTGATTGCGGGGAAGTACCGT
GATTTCGTACAAGTAATACCAGCTCTTGTGGGCTTCTCCACCTACCAAGT
AGCATCGTTTCTACAGGCATTTGATACACAGGACGTGACTGACAAAAACG
GGTGAatgatgacgaggaaagaaaagcataGGATATACTTATGCCGTGAC
AGCTTGAGATGGAGGGGCCAGGCCGTGACAGCGACGTTGCTGTGCTTCTT
CAACAtgttccctcccaccaccaaGGCCATTTTTACACACCCATGTCCCT
CGGCGATTGCTTTTGGATTGTGTCGCGGTCAGGGGCATCAGCAGCATCAG
CACGTGCCCCCAAGACGCGACCACCAATCCATAGCATGCTCCTCATCGAC
CTTAGCCGTTGCATCCCCACAACGCTTTCAAGCGTGGAAACACTTCAgcc
gtctcccttcccttcgtgcCACCGACTCTAccagtccttcttcccctcca
ccacctccttcctcctccaatcggGACGCAGAAGCCTTACGCCGCCAGCG
AATCCTAGCGATGCAGAACGAGATTGTGGAGGAAATCTTGTTGGCCAGCG
ACGAAGAACGGGAGAAGGCCGACGCGGCCAAACGGGCCCTCCGACAGTCG
ACTCGCAGGGCCATCTATGAAGCCTACAGTCAagtggggggagaggtgaA
TATAAGCGAGATCGGGatccccaaaaaaatgacgcGCATGCCCAAGCGTG
CGTTCGCGGATGAAGAGGCGCGGAAGAAAGAAGCCATCTCCCGAGGGAAA
CCGTACGCAGTGCGCAAATTTCAGCTCCTCTTTGACAGCATTTGGCTCTC
AGCAATAGGACTGGCACTGTGCTgggccgctttctccctgcAGACTTCCG
TGTCGTATGGTTTGGGGGCTGTGTTGGGCTTCGGGTACATCACTTTGTTA
GGGCGCACGGTGGAAGCGATGGGCACTGCCGGGCCAGGAGCAGGGGTGGG
CCAAGCTCGGTTCGCTATGGTCATTTTGCTGGTGTTGATTGCGGGGAAGT
ACCGTGATTTCGTACAAGTAATACCAGCTCTTGTGGGCTTCTCCACCTAC
CAAGTAGCATCGTTTCTACAGGCATTTGATACACAGGACGTGACTGACAA
AAACGGGTGA back to top
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