EWM24725.1, cds5948 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|585106260|gb|EWM24725.1| (hypothetical protein Naga_100180g3 [Nannochloropsis gaditana]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MMTRKEKHRIYLCRDSLRWRGQAVTATLLCFFNMFPPTTKAIFTHPCPSAIAFGLCRGQGHQQHQHVPPRRDHQSIACSSSTLAVASPQRFQAWKHFSRLPSLRATDSTSPSSPPPPPSSSNRDAEALRRQRILAMQNEIVEEILLASDEEREKADAAKRALRQSTRRAIYEAYSQVGGEVNISEIGIPKKMTRMPKRAFADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDTQDVTDKNG 334
MMTRKEKHRIYLCRDSLRWRGQAVTATLLCFFNMFPPTTKAIFTHPCPSAIAFGLCRGQGHQQHQHVPPRRDHQSIACSSSTLAVASPQRFQAWKHFSRLPSLRATDSTSPSSPPPPPSSSNRDAEALRRQRILAMQNEIVEEILLASDEEREKADAAKRALRQSTRRAIYEAYSQVGGEVNISEIGIPKKMTRMPKRAFADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDTQDVTDKNG
Sbjct: 1 MMTRKEKHRIYLCRDSLRWRGQAVTATLLCFFNMFPPTTKAIFTHPCPSAIAFGLCRGQGHQQHQHVPPRRDHQSIACSSSTLAVASPQRFQAWKHFSRLPSLRATDSTSPSSPPPPPSSSNRDAEALRRQRILAMQNEIVEEILLASDEEREKADAAKRALRQSTRRAIYEAYSQVGGEVNISEIGIPKKMTRMPKRAFADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDTQDVTDKNG 334
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|299471351|emb|CBN79306.1| (ATP synthase protein I, putative [Ectocarpus siliculosus]) HSP 1 Score: 84.3445 bits (207), Expect = 9.080e-15 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 0
Query: 187 GIPKKMTRMPKRAFADEEARKKEAISRGKP-YAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQ---------ARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDT 326
G K ++++ E EAI+R K Y RK++L+ D+ +L +G A W FSL+ + SYGLGA LG Y+ LL R VE +G G G AR A+ LLVLI K ++ IPA+ GF YQ+A+ +Q T
Sbjct: 165 GKKSKTNNASTQSYSTPEPMLPEAIARQKRLYEKRKWRLIGDNFFLGLLGTAGAWG-FSLKAACSYGLGATLGTAYLVLLSRFVENLGNENADGGGGGRGGGGGGGPARLALAGLLVLIVSKNKETFDFIPAVSGFLAYQIATLVQGIYT 313
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|397574197|gb|EJK49082.1| (hypothetical protein THAOC_32076 [Thalassiosira oceanica]) HSP 1 Score: 72.4034 bits (176), Expect = 3.130e-11 Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 0
Query: 202 DEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCW-AAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTA-----GPGAGVGQARFAMVILLVLIAGKYRDF-VQVIPALVGFSTYQVASFLQAFDTQD 328
DE R++ + +A R+ L D+ + S + + W A + ++SY GA+LG Y LG+ VE++G + GAGVGQARFA +ILLV+ GK+R + IP+++GF TYQ+AS Q D
Sbjct: 89 DESLRRENR----EKFAKRRQALTSDTFYFSVLIASALWIVAPNPFVTISYLFGALLGTAYSFGLGKYVESIGASVDDEEAAGAGVGQARFAFLILLVVFVGKFRSAGLLEIPSIMGFFTYQLASLGQGLRQID 218
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|629080895|gb|KCW47340.1| (hypothetical protein EUGRSUZ_K01127 [Eucalyptus grandis]) HSP 1 Score: 72.7886 bits (177), Expect = 5.802e-11 Identity = 45/134 (33.58%), Postives = 77/134 (57.46%), Query Frame = 0
Query: 205 ARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGA---GVGQARFAMVILLVLIAGKYR-----DF----VQVIPALVGFSTYQVASFLQAFDT 326
A+ KE S+ K RK Q+L SI IGL + +++L+T+ S+G+G + Y+ +LG++V++M G +GQ R + + LV+I ++ DF +++IP LVGF TY++A+F+QA +
Sbjct: 167 AQSKEEYSKLK----RKLQILTLSI--GGIGLVSAYVSYTLKTAASFGVGLLGSLIYVRMLGKSVDSMADGAKGLINRSIGQPRLLVPVALVMIFNRWNEILVPDFGYMHLELIPMLVGFFTYKIATFIQAIEV 294
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|223993787|ref|XP_002286577.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977892|gb|EED96218.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 70.0922 bits (170), Expect = 8.842e-11 Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = 0
Query: 215 KPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQ--TSVSYGLGAVLGFGYITLLGRTVEAMGTA-------GPGAGVGQARFAMVILLVLIAGKYRD-FVQVIPALVGFSTYQVASFLQAFDTQD 328
+ +A R+ L D+++ S + L W FS ++SY GA G Y LG+ VE +G + G GAG+G ARFA +ILL ++ GK+RD + IP+++GF TYQ+AS Q D
Sbjct: 49 EKFAKRRLALTSDTLYFSLLISCLLWL-FSSNPFVTISYLFGATSGTAYAYGLGKYVETIGGSIDDIEEEGAGAGIGSARFAFLILLFVVVGKFRDQGLLEIPSIMGFFTYQLASLGQGLREID 171
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|497453751|ref|WP_009767949.1| (ATP synthase I chain [Oscillatoriales cyanobacterium JSC-12] >gi|410711330|gb|EKQ68837.1| ATP synthase I chain [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 67.0106 bits (162), Expect = 4.025e-10 Identity = 37/121 (30.58%), Postives = 72/121 (59.50%), Query Frame = 0
Query: 198 RAFADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVA 318
R ++ E EA + + Y +++LL ++ L+A+ A W +SL +++Y LGA G Y+ +L R VE +GT + VG+++ A+ + L+++A +++ +Q++P +GF TY+ A
Sbjct: 2 RELSNPEPASPEAQNSMQDYYQLQWELLVTTLILTAVFFAFVWYFYSLTIALNYLLGACTGVVYLKVLARNVERLGT--ENSKVGKSQIAIFVGLIIVATQWKQ-LQILPIFLGFLTYKAA 119
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|1109484063|ref|WP_071891666.1| (hypothetical protein [Cyanobacterium sp. IPPAS B-1200]) HSP 1 Score: 67.781 bits (164), Expect = 4.180e-10 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 0
Query: 193 TRMPKRAFADEEARKKEAISRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDTQDVTDKN 333
T + +R EE +K + ++ Y K+ +L ++ + AL W +SL T ++Y LG +G YI LL R VE +G +G R A+ L++IA + R ++VIP +GF TY+ + L + ++ KN
Sbjct: 20 TLISQRETPPEEEKKDDYMAE---YYRLKYNILIATLIIGLSCFALVWVFYSLSTGLNYLLGTCVGLVYINLLAREVEKVGNG--KRSIGSTRLALFAGLMIIATQ-RQQLEVIPIFLGFMTYKASILLTVLPSSLLSGKN 154
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|505031534|ref|WP_015218636.1| (ATP synthase subunit I [Cyanobacterium aponinum] >gi|428683438|gb|AFZ52905.1| ATP synthase I [Cyanobacterium aponinum PCC 10605]) HSP 1 Score: 66.6254 bits (161), Expect = 6.332e-10 Identity = 40/126 (31.75%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 203 EEARKKEAI--SRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDT 326
E+ ++++ I S + Y +R LL ++ ++ + L W +SLQTS+SY LGA + Y+ +L R VE +G +G R A+ + L+++A +++ QV+P +GF TY+ A L T
Sbjct: 9 EQEKEQQLIDNSMEEYYQLRN-NLLIGTVVIAVVSFILVWVFYSLQTSLSYLLGACVSLVYLNMLAREVERVGVYKK--KIGSTRLAIFVGLMVVATQWQQL-QVLPVFLGFLTYKAAILLYVIPT 130
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|504978416|ref|WP_015165518.1| (hypothetical protein [Pseudanabaena sp. PCC 7367] >gi|427990305|gb|AFY70560.1| ATP synthase I [Pseudanabaena sp. PCC 7367]) HSP 1 Score: 66.2402 bits (160), Expect = 1.157e-9 Identity = 39/135 (28.89%), Postives = 75/135 (55.56%), Query Frame = 0
Query: 197 KRAFADEEARKKEAI--SRGKPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPGAGVGQARFAMVILLVLIAGKYRDFVQVIPALVGFSTYQVASFLQAFDTQDV 329
K+ +A A ++ S YA KF+LL +I +S + W A+ + +++YGLGA +G Y+ +L R+V+ +G VG R + ++L+L+ ++ +++Q++P +GF TY+ A + + QD+
Sbjct: 8 KKEYASVVAESSQSFVDSSMDDYAQLKFKLLVLTIAISGLVCVGVWLAYGMNIALNYGLGACVGLVYLRMLARSVDGLGL--QQRSVGANRLGVFVILMLVTTRW-EYLQILPVFMGFVTYKAA--ILVYTVQDI 137
BLAST of EWM24725.1 vs. NCBI_GenBank
Match: gi|694326701|ref|XP_009354256.1| (PREDICTED: uncharacterized protein LOC103945415 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 68.9366 bits (167), Expect = 1.726e-9 Identity = 37/123 (30.08%), Postives = 68/123 (55.28%), Query Frame = 0
Query: 215 KPYAVRKFQLLFDSIWLSAIGLALCWAAFSLQTSVSYGLGAVLGFGYITLLGRTVEAMGTAGPG---AGVGQARFAMVILLVLIAGKYRDFV---------QVIPALVGFSTYQVASFLQAFD 325
K Y K +L F ++ + +GL + ++S + + SYG+G + Y+ +LG +V++M G +GQ R + ++LV+I ++ V ++IP LVGF TY++A+F+QA +
Sbjct: 205 KQYFRLKKRLQFLTLGIGGVGLVSAYVSYSPEITASYGVGLLGSIAYMRMLGSSVDSMADGARGLLKGAIGQPRLLVPVVLVMIFNRWNGIVVPQYGFMHLELIPMLVGFFTYKIATFIQAIE 327 The following BLAST results are available for this feature:
BLAST of EWM24725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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