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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_103833g1.7279.mrna |
| Orig protein id | gnl|cribi|Naga_103833g1.7279 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:201579..201942 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5956 ID=rna5956|Name=rna5956|organism=Nannochloropsis gaditana|type=mRNA|length=2790bp
AAATTTAATTTTCGTACCTATCACAGAGGCATTGAAAATTATCAGACACG
ATCTAAAACGCTTCAGCACTGCTTCTTGGTCGAGCAAGTGGCAGCGACTT
GGTGCCGGAGGAGTAGGACTCTGAAGAGGATTTGAGACAAAGTCAGGGCT
CGGAGGCTTAACATCTGAGAAAAGGGGTCACTACCTGCGTCTATCCTTGC
ACTCTCCGGAGTTCTTCGCCCTATCATAGCACGTGGATATAGAAAATTTT
GTACTTATTGCCCGGATATTGTGAAGCATGTGTCAATAATATAAGTTAAA
AAGAGTGAATAAAGGTGTGAATACATCGATCCGCTGCCTAAACTATCATT
GTTCCGGCGTAGTCAGGACGGAAAAACTGGTTGTGTGGGAAAAAAGGGGG
ATAAAGAGACGTTTGTGAGTTCTCTGTACAGGGTCAACCGACTCTAGAAC
CGAGCGTGGGCGTCGATTCACGCTGCAATTAGCAAGCACACAACTCTTTA
CCGGCATTTTTTCTACCCATCACTTTGGTTTCTGTGTACGTTGCCACCGA
TTCGGTAGTGCACGATCCATTGCGAAGCGTAGCGAGACGGGGGAAAGTCC
GTGCAAGCGCGAAATTTGTCATTTTACAGAAAGCCGCAACGTTTTGGGGT
GAAACTTTGTGGGAAATCACTGGATTAAGAAAGGGTAAATAAGCTAAGAA
ACAGGAATCTACGTGAAAGAGAACAAGTGGAGAAAGAAAGCATTTGTCCT
AGCACGTCAGCGGAGGCAAGGCAGGACACGGACAAGAATACCCGGATTTT
TGACAGTTGAAAGCGTGTTACAAGATCGACACAAGGGGAAGGGTGCTGAG
CGCACACGTGGGGGTGAGAAAAGAGAAAGGACGTCCAAAGAGACGCAGCG
GCCACAGCGGCACCAAGAAGATTGGAACAAGAAGTTGTGGAGTACGAAGA
TCAGAACCATTCTTTCACCAAAACCGAGAAGGTGTTTCTCGACAGGAGTA
TCCAGTTAGAGCTCGTGAAGCGCATCGGGCTTGCAGTTGACGTTGCAAGG
GGGAACCCAAGATTCTCAAGACTGTGGGAGCGAAGGGCGTTGAGCAGATG
GCTTCATCTTTGGGAGCGCGGGGCCGAGAAAAAGGGCATCAAGCCGGGAT
GGTGTTTGGAGACATAAAGGTGTATGTACAGGAAGTAAACCCGCGTCGCA
CAGGCCGGCGCAAGGGGGAAAAAGCGCTTCAATCCTCCCTTGGGCGGAGG
GGCGAGGTAGAGGGCGGGCGGGAGGGCGTCCTGGAGGGGGGGAAACGACC
GTTGACCTTCAAAAGCTGGAGCACCATCAAGGACGTGAAACAGACTCTCC
AAACCCTCCTGCACGTGCCCATGAACAAACAACGTCTCTTTTTCAACGGG
CGTGAGCTCTCTTCTCCCTCTGGCCCCACCTGTACCGCTCGCCCTGCCCC
CCTTCCTTGTTCACCACCGCCCTCCGCCTACGTGTCTCCTTCGTCGGATT
CCTACGCCCTCCCCGACCTGTGGCGTCGCAACACTACGGGCATGTCGTGG
AATAAGCAGTTGGATGCGAAAGCCAAAGGCCTCCGGGAGCTGAGCAACTA
CGGGCATTCCTTGCAAGACTGCGGCATTGTGCGCGACGGCGAGACGATTT
ATTTCACGATCGCCCCTCCCTCCTCCTTGGACAGGGACCGTGCGGTGCCC
ATCTTGCGACCCTACGGGCTCCTACCCCCGCCTCGGCGCCTGGGACGGGC
CTTGAAGCAGGTGCGACGTGCAATGGACATGGGCGTGAATGGTCCCAAGC
TGACAGTGGAAGGGTTTGGAGGGACGTACTTCCTCTACGACCCTCGACGC
CGACCTCTGGCGGTGTTCAAGCCCTCGGATGAAGAGCCCTACGCCCCCCG
GAACCCGCGAGGGCCAGAATTGGTGGCCGATTGGGGAAAAGTCGGGGGAA
GGGGGGGAGACAAGGGGAGGGTGGAGGTGTTCCAGATGCGTCCTGGGGTG
ACCCCCGGGGAGGGCTACGTGAGGGAGGTAGCGGCCTTTCTACTCGACCA
CGAAGGTTTTGCGGGCGTGCCCGAGACGATCATGGTGCAGGCTCGGCACC
CGGCGTTTCACTACCTCCCGTCCTCGGTATGTTCCGGCGGGAATGATGGG
CAGGAAGGGAGCGTGAAGGTGGGTTCTTTCCAGGAGTACGTCCGCCACGA
CTATGTGGGGGAAGACTTGTCGTCCTCCCTCTTCCCGGTGGCAGAGGTGC
ATAAAATCGCGCTCATGGACCTGCGTTTGCTGAACTCGGACCGGAACGGT
GGAAACATCTTGGTGCGGAGAGTCACAGGGCGGGGGGGGGGGAGGGAGGG
AGAGCCTGGGGGGCCCCGCTATGAACTGATCCCGATTGATCACGGCTACT
GCCTCCCCGAGACCCTCTGCATTGACGACACGCTGAACCTGTGCTGGTTT
GGATGGAGGCAAATGCACGAACCCTGCGATGCGGCGACGCGTGCCTACAT
TGCCTCCTGGGATGCGGAAGCCGACGCCACCCTCTTGCAGGCCCACTTGG
GCATTGGAGAGGCCGCGCTGGATTTGCTGCGGGTAACTACCCGGATGTTG
CAGATTGCCGTGCTGGAGGCGGGCTTGACGCTGCATGAGGTTGCCTGCCT
CCTGGTTCGGCAGACGCCGGAGATAGCCTCGGAGATTGAGAAAGTCAGAG
AAAACGCCGAGACATTGGCTATGGCGGTGACCCGGTCGGGCGTAACGACC
CCCATGAAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGA back to topprotein sequence of rna5956 >rna5956-protein ID=rna5956-protein|Name=rna5956|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MHSRAARAAAEFGRGIRREGGKEKGETSPASSSSSLSWMESVGGRDEVEE
EEEEEGGREGGREGERECGREEAGEGEDRHSWPFEMDLEPRHSALGSDAG
GGHGPK back to topmRNA from alignment at CM002467.1:201579..201942+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5956 ID=rna5956|Name=rna5956|organism=Nannochloropsis gaditana|type=mRNA|length=364bp|location=Sequence derived from alignment at CM002467.1:201579..201942+ (Nannochloropsis gaditana)
ATGCACTCCAGGGCAGCCAGGGCCGCGGCTGAGTTCGGGCGGGGGatacg
gagggagggaggaaaggagaagggtgaaacctcccctgcttcctcctctt
cctccttgtcgtggATGGAGAgtgtgggggggagggacgaggtggaggaa
gaggaggaagaggagggtggaagggagggcgggcgggagggcgagcggga
gtgcgggcgggaggaggcgggggaaggagaggaccgTCACAGCTGGCCTT
TCGAGATGGACTTGGAGCCTCGTCACTCCGCTTTAGGAAGCGacgcaggg
ggggggcatggaccgtccctggtggtggagaagagagagaaaggcagaaa
ggaggaggaaatga back to topCoding sequence (CDS) from alignment at CM002467.1:201579..201942+ >rna5956 ID=rna5956|Name=rna5956|organism=Nannochloropsis gaditana|type=CDS|length=642bp|location=Sequence derived from alignment at CM002467.1:201579..201942+ (Nannochloropsis gaditana)
ATGCACTCCAGGGCAGCCAGGGCCGCGGCTGAGTTCGGGCGGGGGatacg
gagggagggaggaaaggagaagggtgaaacctcccctgcttcctcctctt
cctccttgtcgtggATGGAGAgtgtgggggggagggacgaggtggaggaa
gaggaggaagaggagggtggaagggagggcgggcgggagggcgagcggga
gtgcgggcgggaggaggcgggggaaggagaggaccgTCACAGCTGGCCTT
TCGAGATGGACTTGGAGCCTCGTCACTCCGCTTTAGGAAGCGacgcaggg
ggggggcatggaccgaaatgaATGCACTCCAGGGCAGCCAGGGCCGCGGC
TGAGTTCGGGCGGGGGatacggagggagggaggaaaggagaagggtgaaa
cctcccctgcttcctcctcttcctccttgtcgtggATGGAGAgtgtgggg
gggagggacgaggtggaggaagaggaggaagaggagggtggaagggaggg
cgggcgggagggcgagcgggagtgcgggcgggaggaggcgggggaaggag
aggaccgTCACAGCTGGCCTTTCGAGATGGACTTGGAGCCTCGTCACTCC
GCTTTAGGAAGCGacgcagggggggggcatggaccgaaatga back to top
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