EWM24732.1, cds5941 (CDS) Nannochloropsis gaditana

Overview
NameEWM24732.1
Unique Namecds5941
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:201579..201892 +
Alignment locationCM002467.1:201936..201942 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24732.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103833g1.7279.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:201579..201892 +
CM002467.1supercontigCM002467.1:201936..201942 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24732.1 vs. NCBI_GenBank
Match: gi|585106269|gb|EWM24732.1| (hypothetical protein Naga_103833g1 [Nannochloropsis gaditana])

HSP 1 Score: 197.593 bits (501), Expect = 7.193e-64
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MHSRAARAAAEFGRGIRREGGKEKGETSPASSSSSLSWMESVGGRDEVEEEEEEEGGREGGREGERECGREEAGEGEDRHSWPFEMDLEPRHSALGSDAGGGHGPK 106
            MHSRAARAAAEFGRGIRREGGKEKGETSPASSSSSLSWMESVGGRDEVEEEEEEEGGREGGREGERECGREEAGEGEDRHSWPFEMDLEPRHSALGSDAGGGHGPK
Sbjct:    1 MHSRAARAAAEFGRGIRREGGKEKGETSPASSSSSLSWMESVGGRDEVEEEEEEEGGREGGREGERECGREEAGEGEDRHSWPFEMDLEPRHSALGSDAGGGHGPK 106
The following BLAST results are available for this feature:
BLAST of EWM24732.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106269|gb|EWM24732.1|7.193e-64100.00hypothetical protein Naga_103833g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5956rna5956Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications