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Properties
| Property Name | Value |
|---|
| Product | Phosphatidylinositol 3-/4-kinase, catalytic domain protein |
| Orig transcript id | gnl|cribi|Naga_100272g8.10154.mrna |
| Orig protein id | gnl|cribi|Naga_100272g8.10154 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:197835..201451 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5954 ID=rna5954|Name=rna5954|organism=Nannochloropsis gaditana|type=mRNA|length=1083bp
ATGGCAATCACTAAAGAGATCCTCGCTCATGGCACGGTCAAAATCGCCTG
GCTTGTGACATTTCCCCTAATTTGGGTGGGCTTGTTTACAAAAGGTTGGT
TTGATTTCGCTTACAAGGGAAACCCGGAGGACGAGTCGCTCGCATTTCGC
AATGATTACACCGCTCAATACGGCTTGTTTGGAATCGATTTCGAAACTCC
TGAGGGTATCGTGCGCACAGGCTACAGTGGATGGGCCGTGGCCAACTCGG
CCCATCCTAATGCCTACCTGAGCATTCATGGGTCACGAGTGACAGCCATC
ATAAGCGCAGTCGCATGCATTTTGACGGCAGTGACATATCTCCACTCGAA
GAAGGCCCCTGCCGAAGCTTCCGTGTACATTATGGGCCGATGCGCCTGGC
TCGCCACGTTGGATTTGGCCCTCAACCTGACGACGCTCGGCTTGTGGAGC
ATCACGGCCAACAGCCCTGCCTTCAACACCGTCTGCGAACACCAGGGCTG
TTTCGCTCTGCCTACTGAGAACGTCTCAAATTCCACCCTTTCCTACACCT
GGGGCCTCCTGCTCGTGCGCGTGGCTTTTCAAATCCTCCTGGCGGCAGCG
ATCGTCCATATGACCCTGGCCAAGCGAGCCAGCTTGAATGTAGGATTTCC
AAATCCTCTTAAGCTCGAGATGGAAAAGTCACGTGGCGAGAGGCGACGCA
TCATGGTATCTTCATCAGGCACGATGTTACAATCGTCTTTCCGGCACAGG
GGGTCCTGGAGGGCTGATGATGCAGTCCGGGGAGGCAAAGAATATTTGGT
GCTCAATACAATTCCACGGGCAAGGCAAATGGGCTCAAACCGTAAATACG
AAAGGGATGGATCTATTTGGGGTGTCAGAATTGACATGGAACGATGCGAG
GAACGGTTTGCGTGGGGAAATGAGCCGGACAAATTGAAGACCCTCATAAA
TTGGGAAAATTGGGAGATGATAGGAGAATTGGGAAGAAATTTGGGGGAAG
GGGGGGGGAGGGCACTCAGCATCTCAAGCTTAGTCGAGACAACTTTGACT
ACGACAAAGATGGAGCTCCGAGAAAAGAAATAA back to topprotein sequence of rna5954 >rna5954-protein ID=rna5954-protein|Name=rna5954|organism=Nannochloropsis gaditana|type=polypeptide|length=339bp
MDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPEL
VADWGKVGGRGGDKGRVEVFQMRPGVTPGEGYVREVAAFLLDHEGFAGVP
ETIMVQARHPAFHYLPSSVCSGGNDGQEGSVKVGSFQEYVRHDYVGEDLS
SSLFPVAEVHKIALMDLRLLNSDRNGGNILVRRVTGRGGGREGEPGGPRY
ELIPIDHGYCLPETLCIDDTLNLCWFGWRQMHEPCDAATRAYIASWDAEA
DATLLQAHLGIGEAALDLLRVTTRMLQIAVLEAGLTLHEVACLLVRQTPE
IASEIEKVRENAETLAMAVTRSGVTTPMKGGREGRREGG back to topmRNA from alignment at CM002467.1:197835..201451+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5954 ID=rna5954|Name=rna5954|organism=Nannochloropsis gaditana|type=mRNA|length=3617bp|location=Sequence derived from alignment at CM002467.1:197835..201451+ (Nannochloropsis gaditana)
GATTGCAAGTTTTGAGGTCTAGAAGTTCTGTTTAGAAGGGACGAAGGACG
TGACACAACCAAGCTACTCGAAATCTGCGTGCCGAGGCACACGCTCACAA
AATTTAATTTTCGTACCTATCACAGAGGCATTGAAAATTATCAGACACGA
TCTAAAACGCTTCAGCACTGCTTCTTGGTCGAGCAAGTGGCAGCGACTTG
GTGCCGGAGGAGTAGGACTCTGAAGAGGATTTGAGACAAAGTCAGGGCTC
GGAGGTAAAGctgaaaaagaggagaagattGATGGAGTGGGGTGCAAAAC
GCAAGCTTCTTCGCACTGGGGTATTCTGAGTCTAAGTTAACGGTGAATGT
CGAAGGAATTCTACGAACATAGTAGCTGAAGAACAGGGGTTATcacagcc
ttcctccccgatcTCACAATTTGCCGATTCCGAAAATTTCTGACCTACAG
GCTTAACATCTGAGAAAAGGGGTCACTACCTGCGTCTATCCTTGCACTCT
CCGGAGTTCTTCGCCCTATCATAGCACGTGGTAGGAGGGCAACACCTGTc
cgacccctctcccctcctgtccaggCCCCGTTCTCTCCTACGCCCGCCAC
GATAGGACTGTACCTTTGCTCACTTTTGTTGTTCCTGCCTCTTACACTGT
GTAATTGAACGCAAGAGACTGTACTGACTTTTTTTGCTGCTTGGCCACGG
CAGGATATAGAAAATTTTGTACTTATTGCCCGGATATTGTGAAGCATGTG
TCAATAATATAAGTTAAAAAGAGTGAATAAAGGTGTGAATACATCGATCC
GCTGCCTAAACTATCATTGTTCCGGCGTAGTCAGGACGGAAAAACTGGTT
GtgtgggaaaaaagggggataAAGAGACGTTTGTGAGTTCTCTGTACAGG
GTCAACCGACTCTAGAACCGAGCGTGGGCGTCGATTCACGCTGCAATTAG
CAAGCACACAACTCTTTACCGGCATTTTTTCTACCCATCACTTTGGTTTC
TGTGTACGTTGCCACCGATTCGGTAGTGCACGATCCATTGCGAAGCGTAG
CGAGACGGGGGAAAGTCCGTGCAAGCGCGAAATTTGTCATTTTACAGAAA
GCCGCAACGTTTTGGGGTGAAACTTTGTGGGAAATCACTGGATTAAGAAA
GGGTAAATAAGCTAAGAAACAGGAATCTACGTGAAAGAGAACaagtggag
aaagaaagcattTGTCCTAGCACGTCAGCGGAGGCAAGGCAGGACACGGA
CAAGAATACCCGGATTTTTGACAGTTGAAAGCGTGTTACAAGATCGAcac
aaggggaagggtgcTGAGCGCACACGTGGGGGtgagaaaagagaaaggac
gTCCAAAGAGACGCAGCGGCCACAGCGGCACCAAGAAGATTGGAACAAGA
AGTTGTGGAGTACGAAGATCAGAACCATTCTTTCACCAAAACCGAGAAGG
TGTTTCTCGACAGGAGTATCCAGTTAGAGCTCGTGAAGCGCATCGGGCTT
GCAGTTGACGTTGCAAGGGGGAACCCAAGATTCTCAAGACTGTGGGAGCG
AAGGGCGTTGAGCAGATGGCTTCATCTTTGGGAGCGCGGGGCCGAGAAAA
AGGGCATCAAGCCGGGATGGTGTTTGGAGACATAAAGGTGTATGTACAGG
TacggagaaaaggagaggaaaggttgCAGGCGCTGCTGTTGTGAATGGGA
CCCTATGCTCGTGAGGGAGGCCGTCGGTATCACCCTTTTCATGATACATT
TGTGTTGAGCtccttgcctcttcctctcttgtCTGCAGGAAGTAAACCCG
CGTCGCACAGGCCGgcgcaagggggaaaaagcgcTTCAATCCTCCcttgg
gcggaggggcgaggtagagggcgggcgggagggcgtcctggaggggggga
aacgacCGTTGACCTTCAAAAGCTGGAGCACCATCAAGGACGTGAAACAG
ACTCTCCAAACCCTCCTGCACGTGCCCATGAACAAACAACGTCTCTTTTT
CAACGGGCGTGagctctcttctccctctggcCCCACCTGTACCgctcgcc
ctgccccccttccttgttcaccaccgccctccgcctACGTGTCTCCTTCG
TCGGATTCCTAcgccctccccgacctgTGGCGTCGCAACACTACGGGCAT
GTCGTGGAATAAGCAGTTGGATGCGAAAGCCAAAGGCCTCCGGGAGCTGA
GCAACTACGGGCATTCCTTGCAAGACTGCGGCATTGTGCGCGACGGCGAG
ACGATTTATTTCACgatcgcccctccctcctccttggacaGGGACCGTGC
GGTGCCCATCTTGCGACCCTACGGGCTCCTacccccgcctcggcgccTGG
GACGGGCCTTGAAGCAGGTAAATGACATGTATGGAGAGGGCTGGCTTGGT
CCGTATTGCGTAAATGCCTTGGTTTCCCATGTCGGAGGGGACAGGCGAAG
AGAGGGTTTTTGATTTATCGGTGTCAGAAAGCTTTCTGTCCGGAAATGTC
TTTTTAAGCCTTTGATCCAACCTGCATGATATGAACGGTCGGGCGGATGT
AAATGTTGGAATTAAACGTTTTTTCCCCACCTGGTAGGTGCGACGTGCAA
TGGACATGGGCGTGAATGGTCCCAAGCTGACAGTGGAAGGGTTTGGAGGG
ACGTACTTCCTCTACGACCCTCGACGCCGACCTCTGGCGGTGTTCAAGCC
CTCGGATGAAGAGCCCTACGCCCCCCGGAACCCGCGAGGGCCAGAATTGG
TGGCCGATTGGGGAAAagtcgggggaagggggggagacaaggggagggtg
gaggtgtTCCAGATGCGTCCTGGGGTGACCCCCGGGGAGGGCTACGTGAG
GGAGGTAGCGGCCTTTCTACTCGACCACGAAGGTTTTGCGGGCGTGCCCG
AGACGATCATGGTGCAGGCTCGGCACCCGGCGTTTCACtacctcccgtcc
tcggtATGTTCCGGCGGGAATGatgggcaggaagggagcgtgAAGGTGGG
TTCTTTCCAGGAGTACGTCCGCCACGACTATGTGGGGGAAGacttgtcgt
cctccctcttcccggtGGCAGAGGTGCATAAAATCGCGCTCATGGACCTG
CGTTTGCTGAACTCGGACCGGAACGGTGGAAACATCTTGGTGCGGAGAGT
cacagggcgggggggggggagggagggagagcctGGGGGGCCCCGCTATG
AACTGATCCCGATTGATCACGGCTACTGCCTCCCCGAGACCCTCTGCATT
GACGACACGCTGAACCTGTGCTGGTTTGGATGGAGGCAAATGCACGAACC
CTGCGATGCGGCGACGCGTGCCTACATTGCCTCCTGGGATGCGGAAGCCG
ACGCCACCCTCTTGCAGGCCCACTTGGGCATTGGAGAGGCCGCGCTGGAT
TTGCTGCGGGTAACTACCCGGATGTTGCAGATTGCCGTGCTGGAGGCGGG
CTTGACGCTGCATGAGGTTGCCTGCCTCCTGGTTCGGCAGACGCCGGAGA
TAGCCTCGGAGATTGAGAAAGTCAGAGAAAACGCCGAGACATTGGCTATG
GCGGTGACCCGGTCGGGCGTAACGACCCccatgaagggagggagggaggg
aaggagggagggaggga back to topCoding sequence (CDS) from alignment at CM002467.1:197835..201451+ >rna5954 ID=rna5954|Name=rna5954|organism=Nannochloropsis gaditana|type=CDS|length=1018bp|location=Sequence derived from alignment at CM002467.1:197835..201451+ (Nannochloropsis gaditana)
ATGGACATGGGCGTGAATGGTCCCAAGCTGACAGTGGAAGGGTTTGGAGG
GACGTACTTCCTCTACGACCCTCGACGCCGACCTCTGGCGGTGTTCAAGC
CCTCGGATGAAGAGCCCTACGCCCCCCGGAACCCGCGAGGGCCAGAATTG
GTGGCCGATTGGGGAAAagtcgggggaagggggggagacaaggggagggt
ggaggtgtTCCAGATGCGTCCTGGGGTGACCCCCGGGGAGGGCTACGTGA
GGGAGGTAGCGGCCTTTCTACTCGACCACGAAGGTTTTGCGGGCGTGCCC
GAGACGATCATGGTGCAGGCTCGGCACCCGGCGTTTCACtacctcccgtc
ctcggtATGTTCCGGCGGGAATGatgggcaggaagggagcgtgAAGGTGG
GTTCTTTCCAGGAGTACGTCCGCCACGACTATGTGGGGGAAGacttgtcg
tcctccctcttcccggtGGCAGAGGTGCATAAAATCGCGCTCATGGACCT
GCGTTTGCTGAACTCGGACCGGAACGGTGGAAACATCTTGGTGCGGAGAG
TcacagggcgggggggggggagggagggagagcctGGGGGGCCCCGCTAT
GAACTGATCCCGATTGATCACGGCTACTGCCTCCCCGAGACCCTCTGCAT
TGACGACACGCTGAACCTGTGCTGGTTTGGATGGAGGCAAATGCACGAAC
CCTGCGATGCGGCGACGCGTGCCTACATTGCCTCCTGGGATGCGGAAGCC
GACGCCACCCTCTTGCAGGCCCACTTGGGCATTGGAGAGGCCGCGCTGGA
TTTGCTGCGGGTAACTACCCGGATGTTGCAGATTGCCGTGCTGGAGGCGG
GCTTGACGCTGCATGAGGTTGCCTGCCTCCTGGTTCGGCAGACGCCGGAG
ATAGCCTCGGAGATTGAGAAAGTCAGAGAAAACGCCGAGACATTGGCTAT
GGCGGTGACCCGGTCGGGCGTAACGACCCccatgaagggagggagggagg
gaaggagggagggaggga back to top
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