Naga_100272g8, gene5752 (gene) Nannochloropsis gaditana

Overview
NameNaga_100272g8
Unique Namegene5752
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:197835..201451 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100272g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:197835..201451 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016301kinase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL024ngnoL024Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00910NO14G00910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5954rna5954-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5955rna5955-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5954rna5954Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5955rna5955Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5954

>rna5954-protein ID=rna5954-protein|Name=rna5954|organism=Nannochloropsis gaditana|type=polypeptide|length=339bp
MDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPEL
VADWGKVGGRGGDKGRVEVFQMRPGVTPGEGYVREVAAFLLDHEGFAGVP
ETIMVQARHPAFHYLPSSVCSGGNDGQEGSVKVGSFQEYVRHDYVGEDLS
SSLFPVAEVHKIALMDLRLLNSDRNGGNILVRRVTGRGGGREGEPGGPRY
ELIPIDHGYCLPETLCIDDTLNLCWFGWRQMHEPCDAATRAYIASWDAEA
DATLLQAHLGIGEAALDLLRVTTRMLQIAVLEAGLTLHEVACLLVRQTPE
IASEIEKVRENAETLAMAVTRSGVTTPMKGGREGRREGG
back to top

protein sequence of rna5955

>rna5955-protein ID=rna5955-protein|Name=rna5955|organism=Nannochloropsis gaditana|type=polypeptide|length=564bp
MASSLGARGREKGHQAGMVFGDIKVYVQEVNPRRTGRRKGEKALQSSLGR
RGEVEGGREGVLEGGKRPLTFKSWSTIKDVKQTLQTLLHVPMNKQRLFFN
GRELSSPSGPTCTARPAPLPCSPPPSAYVSPSSDSYALPDLWRRNTTGMS
WNKQLDAKAKGLRELSNYGHSLQDCGIVRDGETIYFTIAPPSSLDRDRAV
PILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPR
RRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGRGGDKGRVEVFQMRPG
VTPGEGYVREVAAFLLDHEGFAGVPETIMVQARHPAFHYLPSSVCSGGND
GQEGSVKVGSFQEYVRHDYVGEDLSSSLFPVAEVHKIALMDLRLLNSDRN
GGNILVRRVTGRGGGREGEPGGPRYELIPIDHGYCLPETLCIDDTLNLCW
FGWRQMHEPCDAATRAYIASWDAEADATLLQAHLGIGEAALDLLRVTTRM
LQIAVLEAGLTLHEVACLLVRQTPEIASEIEKVRENAETLAMAVTRSGVT
TPMKGGREGRREGG
back to top
Synonyms
Publications