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Properties
| Property Name | Value |
|---|
| Product | ammecr1 protein |
| Orig transcript id | gnl|cribi|Naga_100922g1.7984.mrna |
| Orig protein id | gnl|cribi|Naga_100922g1.7984 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:134342..135684 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5932 ID=rna5932|Name=rna5932|organism=Nannochloropsis gaditana|type=mRNA|length=2036bp
AGATCAGATGGAGTGTTAACCTTATTTTCTATTGTCCAATATGTTTACAT
ATGGAGGGTTTCCAATCAGGCGTTGATTGTGAAAAATTATTCTATGAAGT
TGCTCTTCCCACTGTCAAAGAAGACTGACAGAAAAGGCAATATTGTGGAA
CATAAGTGTGAAGCACAGGTGTTAACTTAAAGATTCCGGTACTTCAGAAG
AAGTGAGCTTCGTATTCGATGAAGATGGAAAAGTCTTCTGCCACCACGCC
TTTGCTTCCAGTAGGACATGGCATTCAAGATGGCGCTTTGATACAAGTCG
CTTCTACCAAAAATGGGATCTCATTATGGCTGCTCAAAGACGTATTCTAT
CCCGGGGAAACAATTCACGGGAAAATGAAAGCTACATTCACTTCTCAAAT
GAGTGTCAGGGCAATAAAAATAAAGCTGACAAGTAGAGCAAAAGCTTTCT
GGTGGATATTCAACGGCACACAAATGGTGCCTATATGCGCCAGCCTTAAT
CTGGCTCCTACAATCGAATCAAGTTTGCAGGAGATGATTCCGATACGCAC
CAACTTTGTACTGGAACCTGGTCAGCAGTATGAATGGCCGGTGGAGCTCA
CGCTTCCTCAATCTCTCCCGTCTTCATTTTCCTTCAAAAAGTGGACCAAT
GTGATGAGAGAAAAAACACACATCGCTTATACCCTAACTCTTTTGGTGGA
AGTCCCAGGTTGGATGGACTACAAATTAAACTATAATTTGAAAGTTCATT
CCTCCCCCGTATCCATCACTCCAGTAAGCACTTGGTTGAGAGATCAGAAA
GTTGCCATTGCATAGAATACAAGGAACGGAACTTTCCCCACAAGCACTTT
GCCCCATCGCATCCTTACCGCCCCTATGCCTGTCCTGTGCAGGAAATGCG
TCTTCCTGTAGAGCTTAGGACCTGCGGTCCCATCAGCTCGTGTTACTGTT
TTCTGGGGAAGGTACTTGGAGGAAAGCATAAGCGAAAAAGATAAACCACC
CTCGGGACGTGATACACTCATAACGGGTGTATTTATGCCTCATTATAATA
TGGACTGCCGGTTTTTAGAAATCTATCCCTCTTTTGTATCACATTGCACG
GCATCCTACCATACATCTGTAAGCAATTGATAGAGAGGACAGTCATTTCA
TCTCTTTTCTGCTCCATGACTATGTGCCAGGGGGAGGCTACTCTACATCT
TGTGGTTCCTGTCAGCTGCCTTCCTTTTGCGGACGGGACTTCTGTTTCTC
CTAACTCCTTTCCCATTTCTGTGGGCGTGGAGAATCTGAGTGGAACAGCT
GTCACAAACGTCCGCCTTGCGCTGATTGGAGGCCGTCAGCACATTTCCCA
CCTTGCAATTGAAGTGGGACTCAGAGATTGATGTCGCTTCCTCCCGTTTT
TCCACTCCGAAAAACTTGCACACAGTTCAGATGCCCACTCTTGCGGCGGG
AAATTTGATAAAGATCACTTATCGATTGGAGCTCACCGCTAAAGGCGGCC
GGTGCAAGAGTCTGAAGCTTGTGACACCAATCACATTTGCGCCCTCGGAT
TCCCCTCCTCCGCCGGACAATGCCACTTCACCGCTGCGTTCTCCATATAC
GGGGGATGGTCCGTCGACATGACACATACTATCGTCTCGTACTTTGTACT
CGGTGCGTCATTTCAAAGTCATGGCATGTCAGGGTTTAATTTGCCCCTTG
TTTGTGGATATCAAAAGGTTGTCTTGCGAGGGAAAATGGAGAGAAGGAAT
TGCAGTCACGTTGCTAACAGGAGTAAAGCCCATGAATCAGGTTGAGCGAA
GTTGGGAAGCAGTGGTCAGTATAAACGGAGAAAATCCCGAAACGTAACCT
AGCAAAGATACTCAAAAAACGTCGAGACAATGGCGGTATGCCCGCAATTA
AGCTACTTTGAGACATGTGCGTCCTCCCTATCGGACAGAGTATTTCCGGC
TTCCGATTTCGTCCTTCCACCTTCCCCCCGCCTCAGCCTCTGCTTTTGCA
ACCCCTTGGATAGAGAGCCCCGTGGTGGATCCTGGA back to topprotein sequence of rna5932 >rna5932-protein ID=rna5932-protein|Name=rna5932|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
PSSSSSSSSSSSSSSSSSLSLPPSPSLSSHPQATPAHVHYCFEVLLHHFN
GKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPK
TLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWD
WEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKS
GYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEGGRKKRV
VVS back to topmRNA from alignment at CM002467.1:134342..135684+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5932 ID=rna5932|Name=rna5932|organism=Nannochloropsis gaditana|type=mRNA|length=1343bp|location=Sequence derived from alignment at CM002467.1:134342..135684+ (Nannochloropsis gaditana)
ccccttcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcctccctgtcccttcccccctcaccgTCCCTTTCCAGCCACCCCCAAGC
AACCCCAGCCCACGTGCACTACTGTTTCGAAGTGCTGCTGCACCATTTCA
ACGGCAAAGGCGGGGCCCCACCCGTCCCTGTTTTCGACACGACGGTCAGT
TGCCCTTTGTTCGTGAcctgggagaaggacggtAAAGGAGTGCGTCACGG
AGGCAAAACAGGCCGTCAATTACGCGGGTGCATCGGCACTTTGAGCCCCA
AGACCCTGGGGGACCTTCGCGAGTACGTCTTTAGCAGTGCTTTCCACGAC
CGACGTTTTTCCCCCATTGCTCACCACGAACTCCCTTCGTTGGCCtgctc
cgtctccctcttggtGGCCTACGAAGACGTCGGGCGCGGGAACGTGTGGG
ATTGGGAAGTGGGCGTGCATGGCATCGTCATCTCCTTCCAAGACGGCGTG
GGTCGTGGGGCCCGCAGGTACTCCGCCACCTACTTGCCGGAAGTGGCCGC
CGAGCAAGCCTGGACCCGGCAGGAGGCTTTGGAGAGTCTGGTCCGAAAGT
CGGGCTACACGGGCACGATcgacgcgggggggaaattCTGGGAGAAAGTG
GCATTGACCCGGTATCGGAGCAGCAAATTTTCCATGACTTACCGGGAGTT
TGtggacgggcggggggagggcgggggggagggcgggcggaaaaagaggg
tGGTAGTGTCGTAAATGTTGAGCAgtcggcaggaggagggcggaggggct
cGAGAGGAGAGGGTCCCAGGGGGGGCaacggaagggaaggagggtgcgcA
GAGACGACCAGGCATGTGCTTTGTGCCCGATCTAGGGGTATTGTATCTCT
CTTGACACTGCCGCAGAGAGTTCAAATTATGTGTATATATACACGCGAAT
ATACATAGGTGATGTATCAGTAGGTAGGGTAGGCGCGACGTTCCAGAAAC
TcgcgagagggagatgaaagTGTCCGGAGAAACGTGTTTTCCAAGCGGTC
TCAGGGGGCGTATCGCGGTGCTATATATTGGTGAAATAAATAGAAAAATT
GGGAATGGATGTCCGTTTTGCCATGCTTGTGCATGGGCTCAAGGTCAAGG
AGACCTTGAGCTGAAAAGAAaatgagaggggaaaggggatctagggaggg
agcgaggacggggaggaggtccgggggggagggtagggCTTAGAGTAGAG
GAGAGCGACCGATAGAAGGGAAGTGATATCCTGAATGAATGGAAATTTGG
GccagaaagaaaaaagaacaCACCAATTTCTGGATGATACTGC back to topCoding sequence (CDS) from alignment at CM002467.1:134342..135684+ >rna5932 ID=rna5932|Name=rna5932|organism=Nannochloropsis gaditana|type=CDS|length=762bp|location=Sequence derived from alignment at CM002467.1:134342..135684+ (Nannochloropsis gaditana)
ccttcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctc
ctccctgtcccttcccccctcaccgTCCCTTTCCAGCCACCCCCAAGCAA
CCCCAGCCCACGTGCACTACTGTTTCGAAGTGCTGCTGCACCATTTCAAC
GGCAAAGGCGGGGCCCCACCCGTCCCTGTTTTCGACACGACGGTCAGTTG
CCCTTTGTTCGTGAcctgggagaaggacggtAAAGGAGTGCGTCACGGAG
GCAAAACAGGCCGTCAATTACGCGGGTGCATCGGCACTTTGAGCCCCAAG
ACCCTGGGGGACCTTCGCGAGTACGTCTTTAGCAGTGCTTTCCACGACCG
ACGTTTTTCCCCCATTGCTCACCACGAACTCCCTTCGTTGGCCtgctccg
tctccctcttggtGGCCTACGAAGACGTCGGGCGCGGGAACGTGTGGGAT
TGGGAAGTGGGCGTGCATGGCATCGTCATCTCCTTCCAAGACGGCGTGGG
TCGTGGGGCCCGCAGGTACTCCGCCACCTACTTGCCGGAAGTGGCCGCCG
AGCAAGCCTGGACCCGGCAGGAGGCTTTGGAGAGTCTGGTCCGAAAGTCG
GGCTACACGGGCACGATcgacgcgggggggaaattCTGGGAGAAAGTGGC
ATTGACCCGGTATCGGAGCAGCAAATTTTCCATGACTTACCGGGAGTTTG
tggacgggcggggggagggcgggggggagggcgggcggaaaaagagggtG
GTAGTGTCGTAA back to top
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