EWM24756.1, cds5917 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|585106313|gb|EWM24756.1| (ammecr1 protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 511.531 bits (1316), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 PSSSSSSSSSSSSSSSSSLSLPPSPSLSSHPQATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEGGRKKRVVVS 253
PSSSSSSSSSSSSSSSSSLSLPPSPSLSSHPQATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEGGRKKRVVVS
Sbjct: 1 PSSSSSSSSSSSSSSSSSLSLPPSPSLSSHPQATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEGGRKKRVVVS 253
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|553189912|ref|XP_005855098.1| (hypothetical protein NGA_2120800, partial [Nannochloropsis gaditana CCMP526] >gi|422293962|gb|EKU21262.1| hypothetical protein NGA_2120800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 427.172 bits (1097), Expect = 2.201e-150 Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0
Query: 32 QATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGR 237
QAT AHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGR
Sbjct: 16 QATSAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGR 221
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|298710032|emb|CBJ31750.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 187.193 bits (474), Expect = 1.719e-55 Identity = 105/216 (48.61%), Postives = 133/216 (61.57%), Query Frame = 0
Query: 22 PPSPSLSSHPQATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGR 237
PP+ +L QAT YCF+V++ HFN PP P F T C +FVTW+K HG ++ LRGCIGTL P+ + LR+Y +SSA +DRRF+PI EL SL SVSLLV YE DWE+GVHGIVI F D G YSAT+LPEVAAEQ W+R+ L LVRK+GY +D F V +TRY+SSK + Y+E+++ R
Sbjct: 44 PPAETL----QATREMCAYCFDVIIAHFNNI--EPPPPSFSTRYVCGMFVTWDKH----EHGTES---LRGCIGTLHPQAISQLRDYTYSSALNDRRFAPIEMPELASLDVSVSLLVKYEPAQHWE--DWEIGVHGIVIKFDDDRGSS---YSATFLPEVAAEQGWSRKVTLSRLVRKAGYKRVVDRA--FLAGVEVTRYQSSKHKLPYQEYLEMR 239
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|695428337|ref|XP_009529927.1| (hypothetical protein PHYSODRAFT_286451 [Phytophthora sojae] >gi|348676360|gb|EGZ16178.1| hypothetical protein PHYSODRAFT_286451 [Phytophthora sojae]) HSP 1 Score: 183.341 bits (464), Expect = 1.356e-54 Identity = 98/207 (47.34%), Postives = 126/207 (60.87%), Query Frame = 0
Query: 33 ATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGE 239
A+ A V YCF+ L HF+G GA P P FD PLFVTWE + +G G LRGCIGTL+P L +LR++ F SA DRRF PI EL L CSVSLL+ Y+D + DWE+G HGI+I F D G YSATYLP+VA EQ WT E + SL+RK+GY ++ + V +TRYRSS +TY++++ + E
Sbjct: 2 ASAAMVVYCFDTLQSHFDG--GAEPTPRFDVLQEYPLFVTWEIEEQG-------GTHLRGCIGTLAPTRLRNLRDFTFKSALRDRRFDPIGPQELHRLHCSVSLLIDYQDAESFD--DWEIGTHGIIIDFSDSRG---NEYSATYLPQVAREQGWTHTETVTSLMRKAGYRRSV--TQDMLKTVKVTRYRSSIHKLTYQQYLSLKQE 192
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|953495284|emb|CEG43191.1| (Uncharacterized conserved protein, AMMECR1 [Plasmopara halstedii]) HSP 1 Score: 182.956 bits (463), Expect = 2.437e-54 Identity = 97/207 (46.86%), Postives = 123/207 (59.42%), Query Frame = 0
Query: 33 ATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGE 239
A+ A V YCF+ L HFNG P P FD PLFVTWE + +G QLRGCIGTL+P L +LR++ F SA HDRRF PI EL L CSVSLL+ Y D + DW +G HGI+I F D G YSATYLP+VA EQ WT E + SL+RK+GY T+ + V +TRYR+S +TY++++ + E
Sbjct: 2 ASAAMVVYCFDTLQSHFNG--STEPKPFFDVQQEYPLFVTWEVEEQG-------RIQLRGCIGTLAPTRLQNLRDFTFKSALHDRRFDPIGPQELNRLLCSVSLLIDYNDAKSYD--DWVIGTHGIIIKFNDSDGNT---YSATYLPQVAREQGWTHVETITSLMRKAGYRCTV--SEDMLKTVKVTRYRTSIHKLTYQQYLSVKQE 192
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|1013939679|gb|KYQ93368.1| (DUF51 family protein [Dictyostelium lacteum]) HSP 1 Score: 180.259 bits (456), Expect = 2.786e-53 Identity = 98/203 (48.28%), Postives = 130/203 (64.04%), Query Frame = 0
Query: 32 QATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGD-LREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREF 233
+ TP V YCF+ L++H GK PP + T PLFVTW+K+ G +LRGCIGT L + L ++ +SA D RFSPI+ ELPSL C+VSLLV +ED +VWDWE+G HGI I F D +G R ++TYLPEVA EQ WT+++AL SL++K+GY G +D F KV LTRY+SSK ++TY+E+
Sbjct: 7 RVTPEMVAYCFDSLVYHLEGKALKPPTFINST---FPLFVTWKKEKGG------NEPELRGCIGTFKSIPLIEGLNKFSLTSALKDDRFSPISAKELPSLHCAVSLLVDFEDAK--DVWDWEIGTHGIWIEFSD---QGYTR-NSTYLPEVAEEQGWTQEKALYSLIKKAGYYGKVD--DNFLAKVKLTRYQSSKLTLTYKEY 192
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|593689556|ref|XP_007145397.1| (hypothetical protein PHAVU_007G235600g [Phaseolus vulgaris] >gi|561018587|gb|ESW17391.1| hypothetical protein PHAVU_007G235600g [Phaseolus vulgaris]) HSP 1 Score: 178.333 bits (451), Expect = 1.913e-52 Identity = 101/213 (47.42%), Postives = 131/213 (61.50%), Query Frame = 0
Query: 33 ATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGD-LREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEG 244
A V +CF+ L+ H+N + PP P FD PLFVTW+K V +GG +LRGCIGTL ++L + L++Y +SA DRRF PI +ELP L C+VSLL YE N DWE+ HGI+I F D V R SATYLPEVAA + WT+ EA++SL+RKSGY G I + + + LTRY+S+ F+M YRE+V E GE
Sbjct: 4 ANQEMVVFCFDTLVAHYNNQ--EPPPPAFDQA-HHPLFVTWKK----VVNGGDP--RLRGCIGTLEARSLINGLKDYALTSALRDRRFPPIQANELPLLECTVSLLTDYE--AAKNYLDWEIEKHGIIIEFSDPVY--CTRRSATYLPEVAANEGWTKIEAIDSLIRKSGYNGPI--TDELRKDLQLTRYQSTLFTMNYREYVSYVKERRGEA 201
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|951028472|ref|XP_014514433.1| (PREDICTED: uncharacterized protein At2g38710 [Vigna radiata var. radiata]) HSP 1 Score: 176.022 bits (445), Expect = 1.518e-51 Identity = 100/213 (46.95%), Postives = 131/213 (61.50%), Query Frame = 0
Query: 33 ATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTLGD-LREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEG 244
A V YCF+ L+ H+N + PP P FD PLFVTW+K V +GG +LRGCIGTL ++L + L++Y +SA DRRF PI +ELP L C+VS+L YE N DWE+ HGI+I F D V + R SATYLPEVAA + WT+ EA++SL+RKSGY G I + ++ LTRY+S+ F+M Y E+V E GE
Sbjct: 4 ANQEMVVYCFDTLVSHYNNQ--EPPPPAFDQA-QHPLFVTWKK----VVNGGDP--RLRGCIGTLEARSLINGLKDYALTSALRDRRFPPIQANELPFLECTVSILTDYETAN--NYLDWEIEKHGIIIEFSDPVY--STRRSATYLPEVAANEGWTKVEAIDSLIRKSGYNGPITDELRM--QLQLTRYQSTLFTMHYSEYVSYVKERRGEA 201
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|831776359|ref|XP_012754779.1| (hypothetical protein SAMD00019534_058340 [Acytostelium subglobosum LB1] >gi|735855411|dbj|GAM22659.1| hypothetical protein SAMD00019534_058340 [Acytostelium subglobosum LB1]) HSP 1 Score: 176.022 bits (445), Expect = 1.637e-51 Identity = 94/215 (43.72%), Postives = 127/215 (59.07%), Query Frame = 0
Query: 24 SPSLSSHPQATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTL-GDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGR 237
S S ++ A V YCF+ L++H++ P D PLFVTW+ D +G LRGCIGT + L L Y +SA D RF PI +LP L CSVSLLV +ED + WDWEVGVHGI I F+D + +ATYLPEV EQ WT++EAL+SLVRK+GY G +D + +++ LTRY+SSK +MTY ++++ +
Sbjct: 2 STSQNTTDVANEHMVAYCFDTLINHYDATKLNTPTFTND---PYPLFVTWKIDARG-----NGDYDLRGCIGTFQAQPLIQTLNNYALTSALKDHRFKPIPQKDLPKLKCSVSLLVDFEDAK--DCWDWEVGVHGIWIEFRDA---SNTKLNATYLPEVMPEQEWTKEEALKSLVRKAGYNGKVDE--QLLQRIKLTRYQSSKSAMTYAQYLEHK 201
BLAST of EWM24756.1 vs. NCBI_GenBank
Match: gi|1044558248|ref|XP_017415289.1| (PREDICTED: uncharacterized protein At2g38710 [Vigna angularis] >gi|920691210|gb|KOM34435.1| hypothetical protein LR48_Vigan02g058500 [Vigna angularis] >gi|965609678|dbj|BAT96169.1| hypothetical protein VIGAN_08306100 [Vigna angularis var. angularis]) HSP 1 Score: 174.866 bits (442), Expect = 4.163e-51 Identity = 100/213 (46.95%), Postives = 130/213 (61.03%), Query Frame = 0
Query: 33 ATPAHVHYCFEVLLHHFNGKGGAPPVPVFDTTVSCPLFVTWEKDGKGVRHGGKTGRQLRGCIGTLSPKTL-GDLREYVFSSAFHDRRFSPIAHHELPSLACSVSLLVAYEDVGRGNVWDWEVGVHGIVISFQDGVGRGARRYSATYLPEVAAEQAWTRQEALESLVRKSGYTGTIDAGGKFWEKVALTRYRSSKFSMTYREFVDGRGEGGGEG 244
A V YCF+ L+ H+N + PP P FD PLFVTW+K V +GG +LRGCIGTL ++L L++Y +SA DRRF PI +ELP L C+VS+L YE N DWE+ HGI+I F D V + R SATYLPEVAA + WT+ EA++SL+RKSGY G I + ++ LTRY+S+ F+M Y E+V E GE
Sbjct: 4 ANQEMVVYCFDTLVAHYNNQ--EPPPPAFDQA-QHPLFVTWKK----VVNGGDP--RLRGCIGTLEARSLISGLKDYALTSALRDRRFPPIQANELPFLECTVSILTDYETAN--NYLDWEIEKHGIIIEFSDPVY--STRRSATYLPEVAANEGWTKIEAIDSLIRKSGYNGPITDELRM--QLQLTRYQSTLFTMHYSEYVSYVKERRGEA 201 The following BLAST results are available for this feature:
BLAST of EWM24756.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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