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Properties
| Property Name | Value |
|---|
| Product | 31 kda ribonucleoprotein |
| Orig transcript id | gnl|cribi|Naga_100612g2.7316.mrna |
| Orig protein id | gnl|cribi|Naga_100612g2.7316 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:111688..113544 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5927 ID=rna5927|Name=rna5927|organism=Nannochloropsis gaditana|type=mRNA|length=399bp
ATGGAATCCTCGTGGGTTTTGTACCTGCCGCCTCGGGCGTTTGGGCTGTG
GTGCTGTTCTTATTTCGCCCGTCTGCATGCCACTTATTCTTTGGAACAGG
CATTGTCATGGTGCCTTATTTTAAAACTAGTCCGAGAGGTGGTCAATCGT
CGTGATTTCCTCCCTTTCCATCTCGGTCAACCTCCTTCCAGCCAGACGTC
ACGTCACGATTTTGAAAAAAGGCCCGGGCACGACAACCTACAGGACAACG
TGCCAATGACTCTTCTAGATGTACGGAAGCGAGGAGACAAGTCAATCACG
ATGGAGTTGCAACGAGCGAGATTCTTTGATTTAAAGATGACCGCAAATTT
TCGTAGGTGCTGCTTGGAGTACCCGTATCCCATAATGCCATTAAATTGA back to topprotein sequence of rna5927 >rna5927-protein ID=rna5927-protein|Name=rna5927|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp
MGDYDAYGVPAPVAEAPPRPTSPGQSEEGYKLFVGNLSFRTESAALREAF
EPFGRIVFSTVIENRETGQSRGFGFVVYEQKHEADAAISRMDNAELDGRT
LRVNFARPREEFGGRRGGGRGGYEGRDHNASCSRTINKDIRKEWKLRKRW
KDKCQHTTTKHHRDTTAEGGQEGGREEGRRGVGRKERMMEGEGESRVEMR
MTMRISFSSGEK back to topmRNA from alignment at CM002467.1:111688..113544+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5927 ID=rna5927|Name=rna5927|organism=Nannochloropsis gaditana|type=mRNA|length=1857bp|location=Sequence derived from alignment at CM002467.1:111688..113544+ (Nannochloropsis gaditana)
tcggCCGGAATTCTTCCTGGTGtaatttttctcctccagcttctccacGC
TGTGTCTAACACCCGCATCATATTCCATCCACCGGCGTTATGGCCTGGAA
ACGTTTTCGTCGTGAGAAAGACTGGGATGATCAGACTTGACCTTCTTTGT
ACTCATCCATTTCACCGTGGGCACCGCATCCACCCCCTCAACAGCAAGCA
GcagaaaagcaagaaagatGGGAGACTACGACGCGTATGGTGTCCCGGCC
CCCGTTGCTgaagcccctccccgcccaacATCTCCAGGGCAAAGCGAAGA
GGTACGCATAGAATTACTGAAAAACATGGTGATAGGGGCTTGGATTGGAA
AAAGTGGCAGATGCGGGCGTTCCATGGTCCTTCTTTGATGATCCCCTTTG
CGCTCACCTGATGAATCGTACGTTCGCGCCTGGTTAAGTTTTTTCTCAGA
GAATATAGTTGGTGATACATGAAATTCGATGCCTCACTGTTTGATCATGT
AGTTTTTCGAAGGCAAATGGACCTAAGATTATTTAGTCGGTGAGGAGAGT
GAGCCGTGTTGGCAGGTGCTGAAAACTGAATGAAGTGTATAGGTGCTGTA
AACTATAATAAGTGTATCGCTACCTCTTTATCGGATAAGATGACCCATAT
GCGTAGATAAGTCTGCCCGGCGCTGTGCATAACCATGGATGTGTAGCTAC
ACGTATCTTGGCGGTCGAATGTGCGTCATGGCGCGGCTCTTACAGAGATA
TGAGTTCCTTGAGTTCTGGAGAGCCGAAAGTagttctctcctcccctacc
cggCCCCAGAAGACTTCGTTTACATGAAGCGGACTACTTGTATGCACCTT
TCCCGCTGACATCTtttcccttcgcccctcttttccccttcctccccggt
aCGACCCAGGGTTACAAACTCTTCGTTGGCAACCTTTCTTTCCGGACGGA
ATCCGCCGCCTTGCGCGAAGCTTTTGAACCTTTCGGACGGATTGTCTTCT
CGACCGTGATTGAAAACCGGGAAACGGGCCAGAGCCGTGGCTTTGGCTTC
GTCGTTTACGAACAAAAACACGAGGCGGATGCCGCTATTTCCCGCATGGA
CAACGCCGAGCTGGATGGACGCACCCTTCGGGTCAATTTCGCGCGGCCTC
GGGAAGAATTCGGGGGCAGGCGCGGCGGGGGACGGGGTGGTTACGGTGGG
GGCTTTGGGATgggccgaggcgggggtgggtTTGGGGGTATGGGTGGGGG
AGGCTATGGCGCCCCTCGTTACCCGCCCGCGGGCGGttacggtggaggag
gaggatatggCGTTGGAGCCGGGttgggagggcaagggtaCGGTGGTTAT
GCCGGGGCCGGTGCAGGCGGgtatggaggaggggggggctacGGGGGAGC
AGCGCCCtacggaggggggggaagggggggaggctggtaATTTCTTGTCG
CTCTATGCGATCGGGGAAGGGAAACGCGCGTGCGCGTAGGGGTGGGAATG
TATAACTTTTTTCTATTAGCTTTCGTGGCCTGTACTTTGAATTTTCATAT
TTTGAGTTCAAATGTTGAAGACCGTTGAAAAttgaaagaggggagagacc
ATAATGCAAGCTGCAGCCGCACTATTAACAAGGATATACGAAAAGAATGG
AAATTGAGAAAAAGATGGAAAGACAAATGCCAGCATACGACAACAAAGCA
CCACCGCGACACGACGGCcgaaggggggcaggagggagggagggaggaag
ggcggaggggggtgggccggaaggaaagaatgatggagggcgaaggggag
agcAGGGTCGAGATGCGAATGACGATGCGGATAAGCTTTAGCAGTGGAGA
GAAGTGA back to topCoding sequence (CDS) from alignment at CM002467.1:111688..113544+ >rna5927 ID=rna5927|Name=rna5927|organism=Nannochloropsis gaditana|type=CDS|length=1917bp|location=Sequence derived from alignment at CM002467.1:111688..113544+ (Nannochloropsis gaditana)
atGGGAGACTACGACGCGTATGGTGTCCCGGCCCCCGTTGCTgaagcccc
tccccgcccaacATCTCCAGGGCAAAGCGAAGAGGGTTACAAACTCTTCG
TTGGCAACCTTTCTTTCCGGACGGAATCCGCCGCCTTGCGCGAAGCTTTT
GAACCTTTCGGACGGATTGTCTTCTCGACCGTGATTGAAAACCGGGAAAC
GGGCCAGAGCCGTGGCTTTGGCTTCGTCGTTTACGAACAAAAACACGAGG
CGGATGCCGCTATTTCCCGCATGGACAACGCCGAGCTGGATGGACGCACC
CTTCGGGTCAATTTCGCGCGGCCTCGGGAAGAATTCGGGGGCAGGCGCGG
CGGGGGACGGGGTGGTTACGaggggagagaccATAATGCAAGCTGCAGCC
GCACTATTAACAAGGATATACGAAAAGAATGGAAATTGAGAAAAAGATGG
AAAGACAAATGCCAGCATACGACAACAAAGCACCACCGCGACACGACGGC
cgaaggggggcaggagggagggagggaggaagggcggaggggggtgggcc
ggaaggaaagaatgatggagggcgaaggggagagcAGGGTCGAGATGCGA
ATGACGATGCGGATAAGCTTTAGCAGTGGAGAGAAGTGAatGGGAGACTA
CGACGCGTATGGTGTCCCGGCCCCCGTTGCTgaagcccctccccgcccaa
cATCTCCAGGGCAAAGCGAAGAGGGTTACAAACTCTTCGTTGGCAACCTT
TCTTTCCGGACGGAATCCGCCGCCTTGCGCGAAGCTTTTGAACCTTTCGG
ACGGATTGTCTTCTCGACCGTGATTGAAAACCGGGAAACGGGCCAGAGCC
GTGGCTTTGGCTTCGTCGTTTACGAACAAAAACACGAGGCGGATGCCGCT
ATTTCCCGCATGGACAACGCCGAGCTGGATGGACGCACCCTTCGGGTCAA
TTTCGCGCGGCCTCGGGAAGAATTCGGGGGCAGGCGCGGCGGGGGACGGG
GTGGTTACGaggggagagaccATAATGCAAGCTGCAGCCGCACTATTAAC
AAGGATATACGAAAAGAATGGAAATTGAGAAAAAGATGGAAAGACAAATG
CCAGCATACGACAACAAAGCACCACCGCGACACGACGGCcgaaggggggc
aggagggagggagggaggaagggcggaggggggtgggccggaaggaaaga
atgatggagggcgaaggggagagcAGGGTCGAGATGCGAATGACGATGCG
GATAAGCTTTAGCAGTGGAGAGAAGTGAatGGGAGACTACGACGCGTATG
GTGTCCCGGCCCCCGTTGCTgaagcccctccccgcccaacATCTCCAGGG
CAAAGCGAAGAGGGTTACAAACTCTTCGTTGGCAACCTTTCTTTCCGGAC
GGAATCCGCCGCCTTGCGCGAAGCTTTTGAACCTTTCGGACGGATTGTCT
TCTCGACCGTGATTGAAAACCGGGAAACGGGCCAGAGCCGTGGCTTTGGC
TTCGTCGTTTACGAACAAAAACACGAGGCGGATGCCGCTATTTCCCGCAT
GGACAACGCCGAGCTGGATGGACGCACCCTTCGGGTCAATTTCGCGCGGC
CTCGGGAAGAATTCGGGGGCAGGCGCGGCGGGGGACGGGGTGGTTACGag
gggagagaccATAATGCAAGCTGCAGCCGCACTATTAACAAGGATATACG
AAAAGAATGGAAATTGAGAAAAAGATGGAAAGACAAATGCCAGCATACGA
CAACAAAGCACCACCGCGACACGACGGCcgaaggggggcaggagggaggg
agggaggaagggcggaggggggtgggccggaaggaaagaatgatggaggg
cgaaggggagagcAGGGTCGAGATGCGAATGACGATGCGGATAAGCTTTA
GCAGTGGAGAGAAGTGA back to top
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