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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100612g4.7318.mrna |
| Orig protein id | gnl|cribi|Naga_100612g4.7318 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:109731..110517 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5925 ID=rna5925|Name=rna5925|organism=Nannochloropsis gaditana|type=mRNA|length=1623bp
CGGGGGGGGAGCGCGGAGAAGGGCCTGTTGCAGCTACGCATCAAAGCCCG
TCGGGAGGCAGGAGGCAAACCGCCCCTCCATTCTCCTCGCCTGCCCCCTG
GTCCCCCTCCCCCTGTGGCGGAGCCTCCCGAGCACCAACCCTGGAATGCC
CTACCCCCCATGCCGCAGCCGATCTCCCTCCTTCCCTCCCTCCAACCCTC
AATCCAACCTTTGCCCGCGGCGGGGAAGGAGGACGAGAAGGACGGGAAGG
AAAGCCTGGGCGAAGGCACGCTGGAAAAAGGTCCGACAGAGGGGAAAAAG
GCGCGAAAGCAATCTCAACAAGGGGCGCAGACACACGACACCAAGCCCTC
TCCCCCTCCCTCCACCGCGACCTCCCTCCCCACCTGGCCTGCTCCCCCTC
TCCCGGGCTACCCGCCTCCCTCCGCCGCGCCCCCTGCCGGGAGCTCGACC
CTCCCTCCCCCACCTACCGACCTGGCGGGCCGACACTGGACCCCGCAGGA
GGCACATGCCTACTACTACCCCCAGTGGCACTCGGCGACCACCCATCCCC
CGGCCCCTCCGGCCTCCCAGACCCAGCCTCAGCAGCAAGACAAAAATGCC
GGGCCGTCCTCCTACTCCTTTCCTCCCCCTCCCCACCCGTCCTACCCGCC
CTATCCCCTCCCTCCTCCCCCCGGACACGGAGTCCAAGGCTCGTACCCCC
TCTATCCTCCCCCTTTCTCGTCCTCCTACCTGCCCCCCCCCCCTCCCCCT
ACCTCGGGCTCGGAAGCCGCCGACAAGAACGCGGCCTCCACCGGCACCTC
CCTGCCGCCCTCCTCCTCCGGCCACACCACCTGTGACGCCAGTAGCAACA
ACAGCAGCAACAACCCTTCCCCCGCCTTGGGCGCGGCGGCGGAAGGGGCC
CACCCGACCTCCTCCGCCCCTCAGCAGGACTTGGCCGTGGGGGTCATGCT
CTCCGTGGCTTCGGACGACGGCGGGGCGGAGGGTGGGATGGAGGACGGGA
TGGAGGAAGGGGCGGAGGGCCACGTACCTTCCCAGTACCCCGGGGTGCAT
TGGGACCGGGAGAAGAAAACCTGGAGCGCCTGGTTAACCTTGCCCGGTGG
AGAATACCAATGCTTGGGAGAAAGCTTCAGGGACGAACACGCTGCATTGA
CGGCCCAAACGGAAGCTATCGCGAATTACTACAGGACCCTGGGGATGATT
CCTCCCCCTCCCCCCCCCGCCTTGGCGGCGGCCATGGCCCCCGCGCCCGC
CGTGGACGGGACAGAGGGAGGAAAGGAAGGGAAAGAGGGTGGAGTGGAGG
CAGGCATGGAGGTGGTGGGAGAGGAAGGGCTTCCCACTCCTGCCGCTGCG
CCGGCGGTGGCCGCCGCGGAGGTCGAGGGAGCATGGGAGGAAGAGGAGGG
AAGGAAGGAGGAGGAAAGGGAGAAGCCGAAGGAGTTGGAAACGGAGGGAG
GAGGACCGGGGCACCGGAAACAACAGCCGAGTGAGGGCACCGCAGCCGTC
GTTTCCGCGTTGTTACAGGTGGGGAAGAGTGCCGCAGGAGAGGAGGATGA
GCTTTTGGGCCTCGGAGTGGCGGCGGCGGCTGGGGCAGGCACCTCGTCGG
CTTCTCCCTCTCCCGGACGTTGA back to topprotein sequence of rna5925 >rna5925-protein ID=rna5925-protein|Name=rna5925|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MGKRKKEKGGCKKRVDMPQSSSEGLKEAAARERRASEGKSVYPSMGGQTT
PVASQSDPDVLAIGLSSRGGWGGRKAVPAENESPEPGRVKSGAGGGNKEQ
SESGALSEGKARGAIRFPWECIRLTGVGRTGKEVMFSYILRTAPKRVQYL
RMEKGIGRAKNDGSWTTLGFYWYEEKVIKWSKRNIEEGTGEF back to topmRNA from alignment at CM002467.1:109731..110517+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5925 ID=rna5925|Name=rna5925|organism=Nannochloropsis gaditana|type=mRNA|length=787bp|location=Sequence derived from alignment at CM002467.1:109731..110517+ (Nannochloropsis gaditana)
atgggaaagaggaagaaagaaaagggagggtgcaAGAAACGAGTTGACAT
GCCGCAGTCGTCGTCGGAGGGACTTAAGGAAGCCGCGGCGAGAGAGCGCA
GGGCTTCAGAAGGAAAGTCTGTCTATCCCAGCATGGGTGGACAGACGACC
CCTGTCGCCTCCcaaagcgacccggatgtgttGGCGATAGGACTGTCgtc
gagaggaggttggggtGGAAGAAAGGCAGTGCCAGCGGAAAATGAAAGTC
CCGAACCGGGCCGCGTCAAATCAGGCGCAGGAGGTGGTAACAAGGAACAG
AGTGAGAGTGGAGCACTGTCGTCCTGAGGTGGGAACGGAAGAAGCGGGCC
AGAGGGAGACGAAAGGGGCCATGTCgacaaaagaaaaggggcaggCCGtg
tgaaaaggaagggagggaaaggctcgAGGCGCCATTCGTTTCCCATGGGA
GTGTATTCGTCTGACCGGGGTGGGCAGGACGGGCAAAGAGGTTATGTTCT
CCTATATTCTGCGTACAGCGCCGAAACGGGTACAGTATCtgaggatggag
aaaggaatCGGACGGGCGAAAAATGATGGATCGTGGACGACTCTTGGTTT
CTACTGGTACGGTGACGAAAAAGCTTAATATTTTTTCTTATCCATGTTAA
AAGGAGAAAAGTAACGACGAAGGTGATATAGCGGGGGAAGAGATTCGTGG
GAAGGTATTGGGAAAGTGGGGAAGTGAGAAGAGAAGGTCATTAAGTGGAG
TAAAAGGAATATAGAGGAGGGAACCGGTGAATTCTAA back to topCoding sequence (CDS) from alignment at CM002467.1:109731..110517+ >rna5925 ID=rna5925|Name=rna5925|organism=Nannochloropsis gaditana|type=CDS|length=1737bp|location=Sequence derived from alignment at CM002467.1:109731..110517+ (Nannochloropsis gaditana)
atgggaaagaggaagaaagaaaagggagggtgcaAGAAACGAGTTGACAT
GCCGCAGTCGTCGTCGGAGGGACTTAAGGAAGCCGCGGCGAGAGAGCGCA
GGGCTTCAGAAGGAAAGTCTGTCTATCCCAGCATGGGTGGACAGACGACC
CCTGTCGCCTCCcaaagcgacccggatgtgttGGCGATAGGACTGTCgtc
gagaggaggttggggtGGAAGAAAGGCAGTGCCAGCGGAAAATGAAAGTC
CCGAACCGGGCCGCGTCAAATCAGGCGCAGGAGGTGGTAACAAGGAACAG
AGTGAGAGTGGAGCACTGTCggagggaaaggctcgAGGCGCCATTCGTTT
CCCATGGGAGTGTATTCGTCTGACCGGGGTGGGCAGGACGGGCAAAGAGG
TTATGTTCTCCTATATTCTGCGTACAGCGCCGAAACGGGTACAGTATCtg
aggatggagaaaggaatCGGACGGGCGAAAAATGATGGATCGTGGACGAC
TCTTGGTTTCTACTGGTACGAAGAGAAGGTCATTAAGTGGAGTAAAAGGA
ATATAGAGGAGGGAACCGGTGAATTCTAAatgggaaagaggaagaaagaa
aagggagggtgcaAGAAACGAGTTGACATGCCGCAGTCGTCGTCGGAGGG
ACTTAAGGAAGCCGCGGCGAGAGAGCGCAGGGCTTCAGAAGGAAAGTCTG
TCTATCCCAGCATGGGTGGACAGACGACCCCTGTCGCCTCCcaaagcgac
ccggatgtgttGGCGATAGGACTGTCgtcgagaggaggttggggtGGAAG
AAAGGCAGTGCCAGCGGAAAATGAAAGTCCCGAACCGGGCCGCGTCAAAT
CAGGCGCAGGAGGTGGTAACAAGGAACAGAGTGAGAGTGGAGCACTGTCg
gagggaaaggctcgAGGCGCCATTCGTTTCCCATGGGAGTGTATTCGTCT
GACCGGGGTGGGCAGGACGGGCAAAGAGGTTATGTTCTCCTATATTCTGC
GTACAGCGCCGAAACGGGTACAGTATCtgaggatggagaaaggaatCGGA
CGGGCGAAAAATGATGGATCGTGGACGACTCTTGGTTTCTACTGGTACGA
AGAGAAGGTCATTAAGTGGAGTAAAAGGAATATAGAGGAGGGAACCGGTG
AATTCTAAatgggaaagaggaagaaagaaaagggagggtgcaAGAAACGA
GTTGACATGCCGCAGTCGTCGTCGGAGGGACTTAAGGAAGCCGCGGCGAG
AGAGCGCAGGGCTTCAGAAGGAAAGTCTGTCTATCCCAGCATGGGTGGAC
AGACGACCCCTGTCGCCTCCcaaagcgacccggatgtgttGGCGATAGGA
CTGTCgtcgagaggaggttggggtGGAAGAAAGGCAGTGCCAGCGGAAAA
TGAAAGTCCCGAACCGGGCCGCGTCAAATCAGGCGCAGGAGGTGGTAACA
AGGAACAGAGTGAGAGTGGAGCACTGTCggagggaaaggctcgAGGCGCC
ATTCGTTTCCCATGGGAGTGTATTCGTCTGACCGGGGTGGGCAGGACGGG
CAAAGAGGTTATGTTCTCCTATATTCTGCGTACAGCGCCGAAACGGGTAC
AGTATCtgaggatggagaaaggaatCGGACGGGCGAAAAATGATGGATCG
TGGACGACTCTTGGTTTCTACTGGTACGAAGAGAAGGTCATTAAGTGGAG
TAAAAGGAATATAGAGGAGGGAACCGGTGAATTCTAA back to top
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