EWM24764.1, cds5910 (CDS) Nannochloropsis gaditana

Overview
NameEWM24764.1
Unique Namecds5910
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:109731..110050 +
Alignment locationCM002467.1:110142..110341 +
Alignment locationCM002467.1:110459..110517 +

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Properties
Property NameValue
Protein idEWM24764.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100612g4.7318.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:109731..110050 +
CM002467.1supercontigCM002467.1:110142..110341 +
CM002467.1supercontigCM002467.1:110459..110517 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24764.1 vs. NCBI_GenBank
Match: gi|585106324|gb|EWM24764.1| (hypothetical protein Naga_100612g4 [Nannochloropsis gaditana])

HSP 1 Score: 382.874 bits (982), Expect = 2.410e-134
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 
Query:    1 MGKRKKEKGGCKKRVDMPQSSSEGLKEAAARERRASEGKSVYPSMGGQTTPVASQSDPDVLAIGLSSRGGWGGRKAVPAENESPEPGRVKSGAGGGNKEQSESGALSEGKARGAIRFPWECIRLTGVGRTGKEVMFSYILRTAPKRVQYLRMEKGIGRAKNDGSWTTLGFYWYEEKVIKWSKRNIEEGTGEF 192
            MGKRKKEKGGCKKRVDMPQSSSEGLKEAAARERRASEGKSVYPSMGGQTTPVASQSDPDVLAIGLSSRGGWGGRKAVPAENESPEPGRVKSGAGGGNKEQSESGALSEGKARGAIRFPWECIRLTGVGRTGKEVMFSYILRTAPKRVQYLRMEKGIGRAKNDGSWTTLGFYWYEEKVIKWSKRNIEEGTGEF
Sbjct:    1 MGKRKKEKGGCKKRVDMPQSSSEGLKEAAARERRASEGKSVYPSMGGQTTPVASQSDPDVLAIGLSSRGGWGGRKAVPAENESPEPGRVKSGAGGGNKEQSESGALSEGKARGAIRFPWECIRLTGVGRTGKEVMFSYILRTAPKRVQYLRMEKGIGRAKNDGSWTTLGFYWYEEKVIKWSKRNIEEGTGEF 192
The following BLAST results are available for this feature:
BLAST of EWM24764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106324|gb|EWM24764.1|2.410e-134100.00hypothetical protein Naga_100612g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5925rna5925Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications