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Properties
| Property Name | Value |
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| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100612g6.7315.mrna |
| Orig protein id | gnl|cribi|Naga_100612g6.7315 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:107728..109350 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5924 ID=rna5924|Name=rna5924|organism=Nannochloropsis gaditana|type=mRNA|length=664bp
TCCAGATTGAGACCAAGGCCGCGTGTGCGCATTTTTGCTGCCAATTTACC
ACGGTGGCATCTGGCTTGAAAGGCGGTTTCTCTTCCTTTCTCCCGCCTGC
CTCCTCACCCTTGTGACGGCCAGGCTATTTTTTGCACATCACTGCGTCCT
TTGAACAATGGATCATCTCCATCAGGGCAAAGTCACATCCGACTATCGCG
GCATTCGTTGGCATAAGTGCAACCGGAAATGGGAAGTGCAAATTAAATAC
CGGGGAAAGAAACTCTCCTTGGGGTATTTCGACGACGAGTTGGTCGCCGC
GCAATGCTACGACCGCCGCGCCAAGGAGCTTTACGAAACGCCCCTTTTAA
ATTTCCTGCCAGGAGGAAAACTCAATCCCGAGAGGAAACGACGCGTGGAT
CCTCGAAGCTTGAGGCCACGGCGCATCCCTCCTCCTTGGTGCGCCGATAA
GTTTGTCCCCCTTCCGCCCGAGTCTGCGGACAGCGAGGCTCCCCGCCTGC
GTGTGCTGATCCCGCGCGAGGGAGGGCGGGGGGGGGCGGGGGGAGGGCGG
GGGGCAGGGCGAGGCCGGAAGCGTCGAAGTCCCAGTCCAAGCCCCAGCCG
GTACCCTGAAAAATTCTACAGCGACGAAGAGGAAGGCGGGGAGGAGGAGG
TAATTTTGTCGGAC back to topprotein sequence of rna5924 >rna5924-protein ID=rna5924-protein|Name=rna5924|organism=Nannochloropsis gaditana|type=polypeptide|length=540bp
RGGSAEKGLLQLRIKARREAGGKPPLHSPRLPPGPPPPVAEPPEHQPWNA
LPPMPQPISLLPSLQPSIQPLPAAGKEDEKDGKESLGEGTLEKGPTEGKK
ARKQSQQGAQTHDTKPSPPPSTATSLPTWPAPPLPGYPPPSAAPPAGSST
LPPPPTDLAGRHWTPQEAHAYYYPQWHSATTHPPAPPASQTQPQQQDKNA
GPSSYSFPPPPHPSYPPYPLPPPPGHGVQGSYPLYPPPFSSSYLPPPPPP
TSGSEAADKNAASTGTSLPPSSSGHTTCDASSNNSSNNPSPALGAAAEGA
HPTSSAPQQDLAVGVMLSVASDDGGAEGGMEDGMEEGAEGHVPSQYPGVH
WDREKKTWSAWLTLPGGEYQCLGESFRDEHAALTAQTEAIANYYRTLGMI
PPPPPPALAAAMAPAPAVDGTEGGKEGKEGGVEAGMEVVGEEGLPTPAAA
PAVAAAEVEGAWEEEEGRKEEEREKPKELETEGGGPGHRKQQPSEGTAAV
VSALLQVGKSAAGEEDELLGLGVAAAAGAGTSSASPSPGR back to topmRNA from alignment at CM002467.1:107728..109350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5924 ID=rna5924|Name=rna5924|organism=Nannochloropsis gaditana|type=mRNA|length=1623bp|location=Sequence derived from alignment at CM002467.1:107728..109350+ (Nannochloropsis gaditana)
cggggggggagcgcGGAGAAGGGCCTGTTGCAGCTACGCATCAAAGCCCg
tcgggaggcaggaggcaaaCCGCCCCTCCAttctcctcgcctgccccctg
gtccccctccccctgtggCGGAGCCTCCCGAGCACCAACCCTGGAATGCC
CTACCCCCCATGCCGCAGccgatctccctccttccctccctccaaccctc
AATCCAACCTTTGCccgcggcggggaaggaggacgagaaggacgggaagg
aaagcctgGGCGAAGGCACGCTGGAAAAAGGTCCGacagaggggaaaaag
gcgcgaaagcAATCTCAACAAGGGGCGCAGACACACGACACcaagccctc
tccccctccctccaccgcgacctccctccccacctggcctgctccccctc
tcccgggctacccgcctccctccgccgcgcccccTGCCGGGAgctcgacc
ctccctcccccacctacCGACCTGGCGGGCCGACACTGGACCCCGCAGGA
GGCACATGCCTACTACTACCCCCAGTGGCACTCGGCGACCACCcatcccc
cggcccctccggcctcccAGACCCAGCCTCAGCAGCAAGACAAAAATGCC
GGGCCGTCCTCCtactcctttcctccccctccccacccgtcctACCCGCc
ctatcccctccctcctccccccggacACGGAGTCCAAGGCTCGTACCCCC
TCtatcctccccctttctcgtcctcctacctgccccccccccctccccct
acctcGGGCTCGGAAGCCGCCGACAAGAACGCGGCCTCCACCGGCAcctc
cctgccgccctcctcctccggccacACCACCTGTGACGCCAGtagcaaca
acagcagcaacaacccttcccccgccttgggcgcggcggcggaaggggcc
cacccgacctcctccgcccctcagCAGGACTTGGCCGTGGGGGTCATGCT
CTCCGTGGCTTCGGACGacggcggggcggagggtgggatggaggacggga
tggaggaaggggcggagggccaCGTACCTTCCCAGTACCCCGGGGTGCAT
TGGGACCGGGAGAAGAAAACCTGGAGCGCCTGGTTAACCTTGCCCGGTGG
AGAATACCAATGCTTGGGAGAAAGCTTCAGGGACGAACACGCTGCATTGA
CGGCCCAAACGGAAGCTATCGCGAATTACTACAGGACCCTGGGGAtgatt
cctccccctcccccccccgccttggcggcggccatggcccccgcgcccgc
cgtggacgggacagagggaggaaaggaagggaaagagggtggagtggagg
caggcatggaggtggtgggagaggaagggcttcCCACTCCTGCCGCTGCG
CCGGCGGTGGCCGCCgcggaggtcgagggagcatgggaggaagaggaggg
aaggaaggaggaggaaagggagaagccgAAGGAGTtggaaacggagggag
gaggaccgggGCACCGGAAACAACAGCCGAGTGAGGGCACCGCAGCCGTC
GTTTCCGCGTTGTTACAGGTGGGGAAGAGTGccgcaggagaggaggatga
gctTTTGGGCCTCggagtggcggcggcggctgggGCAGGCACCTCGtcgg
cttctccctctcccggacgttga back to topCoding sequence (CDS) from alignment at CM002467.1:107728..109350+ >rna5924 ID=rna5924|Name=rna5924|organism=Nannochloropsis gaditana|type=CDS|length=1623bp|location=Sequence derived from alignment at CM002467.1:107728..109350+ (Nannochloropsis gaditana)
cggggggggagcgcGGAGAAGGGCCTGTTGCAGCTACGCATCAAAGCCCg
tcgggaggcaggaggcaaaCCGCCCCTCCAttctcctcgcctgccccctg
gtccccctccccctgtggCGGAGCCTCCCGAGCACCAACCCTGGAATGCC
CTACCCCCCATGCCGCAGccgatctccctccttccctccctccaaccctc
AATCCAACCTTTGCccgcggcggggaaggaggacgagaaggacgggaagg
aaagcctgGGCGAAGGCACGCTGGAAAAAGGTCCGacagaggggaaaaag
gcgcgaaagcAATCTCAACAAGGGGCGCAGACACACGACACcaagccctc
tccccctccctccaccgcgacctccctccccacctggcctgctccccctc
tcccgggctacccgcctccctccgccgcgcccccTGCCGGGAgctcgacc
ctccctcccccacctacCGACCTGGCGGGCCGACACTGGACCCCGCAGGA
GGCACATGCCTACTACTACCCCCAGTGGCACTCGGCGACCACCcatcccc
cggcccctccggcctcccAGACCCAGCCTCAGCAGCAAGACAAAAATGCC
GGGCCGTCCTCCtactcctttcctccccctccccacccgtcctACCCGCc
ctatcccctccctcctccccccggacACGGAGTCCAAGGCTCGTACCCCC
TCtatcctccccctttctcgtcctcctacctgccccccccccctccccct
acctcGGGCTCGGAAGCCGCCGACAAGAACGCGGCCTCCACCGGCAcctc
cctgccgccctcctcctccggccacACCACCTGTGACGCCAGtagcaaca
acagcagcaacaacccttcccccgccttgggcgcggcggcggaaggggcc
cacccgacctcctccgcccctcagCAGGACTTGGCCGTGGGGGTCATGCT
CTCCGTGGCTTCGGACGacggcggggcggagggtgggatggaggacggga
tggaggaaggggcggagggccaCGTACCTTCCCAGTACCCCGGGGTGCAT
TGGGACCGGGAGAAGAAAACCTGGAGCGCCTGGTTAACCTTGCCCGGTGG
AGAATACCAATGCTTGGGAGAAAGCTTCAGGGACGAACACGCTGCATTGA
CGGCCCAAACGGAAGCTATCGCGAATTACTACAGGACCCTGGGGAtgatt
cctccccctcccccccccgccttggcggcggccatggcccccgcgcccgc
cgtggacgggacagagggaggaaaggaagggaaagagggtggagtggagg
caggcatggaggtggtgggagaggaagggcttcCCACTCCTGCCGCTGCG
CCGGCGGTGGCCGCCgcggaggtcgagggagcatgggaggaagaggaggg
aaggaaggaggaggaaagggagaagccgAAGGAGTtggaaacggagggag
gaggaccgggGCACCGGAAACAACAGCCGAGTGAGGGCACCGCAGCCGTC
GTTTCCGCGTTGTTACAGGTGGGGAAGAGTGccgcaggagaggaggatga
gctTTTGGGCCTCggagtggcggcggcggctgggGCAGGCACCTCGtcgg
cttctccctctcccggacgttga back to top
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