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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100255g8.4986.mrna |
| Orig protein id | gnl|cribi|Naga_100255g8.4986 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:96583..99744 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5921 ID=rna5921|Name=rna5921|organism=Nannochloropsis gaditana|type=mRNA|length=1003bp
TAATGGTTGTAATCGGGTGACGTTTCCGTCGGTTGAAGTTTTTTGGTCCG
AGTTGCGCTTTTGACTACCTCCTCCTCCTCAGCCCACAACCCTTTCCACG
CTACACCCTATAGAAATGAGTTCAGCCAGAAGAAACGGCAAAATTACCAG
CGTAATATATCATGACGACGCAACAATTGAGGGGAAGGGCTCTTATTGCT
TGGAGGCGGCTTTGGCCATGGCTTTGGAAGCCTCATCCCCGTCAGGGGGA
GAAACAGAGGAGGAGGAGAAGACATGTATTGAAACAGAGAAAGCCCCAGC
AGCTGATTTTGATCCGATTTTAGAGGCATCTGAAAAGAGCTACCTTGCAT
TCAGTTCAACGGCGGAAGATGGAGACTCAAGGTCCAAGCCATCGTACTTC
GAGCCAGTACCCGACGACGTCCTTTGCCGCATCCTCACCTACGCAGGGTC
TTCACGCGGGAAATGCTGCAAACGATGGGAAAAAGCGAAAACATTGGTCC
TGCGGGCACGTCACGTGGATGCCTTGGTACAGAAAACCAAACTGCCTGAG
CCCCTTTGCCGAGCCCTTGAGCGCGAACTATTCTTGGCGACGCAGGAACG
GATTGCCTCCCGAGAGTATCAAAATATGCTCCGCAAGCTTCTTTTCCATT
TGAAAGACCCTGGGGATATGCGTGCGGCGAGTAGTAACACTCGATTGCGT
GAGGAGCTGCTCATTGGGTAGGTGCATTCGTGATTCCTGGTCCCTGTTTC
CTGTATCTTTTGGCCTTTGTTCTTGTTTCGCTATTCCTCTTTATTCTAAG
TTGTGCTCCTTCTGCAATTATCTTGACCGTTGTTGGGGAATATTAATTAA
ACTTTATGTCAGTTTTGACGGACGATTGAATCTGAATCTGTTCGGGTACA
CCTTGATTTGCGGTAAAGCAGACGCAAGACTCAAAAGCGGCCATGATTCA
AACACTAATTTTCTTTTTCTCTCCATGTCTAAGAATGTGTTACGTTGTAT
TTA back to topprotein sequence of rna5921 >rna5921-protein ID=rna5921-protein|Name=rna5921|organism=Nannochloropsis gaditana|type=polypeptide|length=295bp
MKAVATQPVHRPLLFCRRFLVFTVVLSLTVLTCISPSYNAFDLVPALRTA
TSRDKGIKTRALPPPSPAPPFLSQPSLLLRFATPSSPPSPPSPHEAKRRR
RAMARQRRRRRHAEERAAFQNQTLHAPGLVPSQVYLSPRHKKRPPFPDLS
TTPTSSSSSPSSSEEDAQDLIVLEVPACPPSLPPSPPPSLPPSPPPSLPP
SPPPSSPPSPAPYRRSGDCPNVHWRAIPFPHLRQHPSFQALPPSRPPSRL
ADLRFFRQDSWEWRALHVGRLTTSRVGGLLGGDGGRREGGKEGGR back to topmRNA from alignment at CM002467.1:96583..99744+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5921 ID=rna5921|Name=rna5921|organism=Nannochloropsis gaditana|type=mRNA|length=3162bp|location=Sequence derived from alignment at CM002467.1:96583..99744+ (Nannochloropsis gaditana)
TAATTGCAGAAGGAGCACAACTTAGAATAAAGAGGAATAGCGAAACAAGA
ACAAAGGCCAAAAGATACAGGAAACAGGGACCAGGAATCACGAATGCACC
TACCCAATGAGCAGCTCCTCACGCAATCGAGTGTTACTACTCGCCGCACG
CATATCCCCAGGGTCTTTCAAATGGAAAAGAAGCTTGCGGAGCATATTTT
GATACTCTCGGGAGGCAATCCTATGCTCAATGTCGCAGCCCACGAAAGGG
AAATGAGTACAAGCCAGTCAGTGAGTCACATTGCTAAAAGACCGCGGGTA
TTGACGACCGTAAGcgacctctcccttctcggTCCACAGGCACGACATTC
ACCAATTCGGTACCCGGTATGTTGCCGCCCTTCAAACgttcccccaccac
ctccacaacTTCCTCAGGgattcatcctcctctttccactCGAGACACCA
CGCCCCAGAAACCCCATGGCGGCTTTTCGTTTTGCACACCATCCCATCGc
ccacgtctccctctttgAACGCCATCCCCTGGCGCACTCACCGTTCCTGC
GTCGCCAAGAATAGTTCGCGCTCAAGGGCTCGGCAAAGGGGCTCAGGCAG
TTTGGTTTTCTGTACCAAGGCATCCACGTGACGTGCCCGCAGGActaggg
caggagggaaaggagcaaagggaacgagggaaggcggggtgaagggagag
cgagggacagggggggtaGAGATCTTGTCTTACTATTCCTGATACCGTGA
TCGACTGTCTCAGGCGTCCACCACTATTTTTAATTGGTATCCTTTTTCCt
gtcatttcctccttcacactTGACAGTTACGCCCTTGACCCTCCGTTTTA
TGGCCTTTTCGGGTTCGACACAGCCAGCACGCCTCCCTGGAGTACACTTC
TTACCCAATGTTTTCGCTTTTTCCCATCGTTTGCAGCATTTCCCGCGTGA
AGACCCTGCGTAGGTGAGGATGCGGCAAAGGACGTCCTGTGGACAGTGCA
ACATTAGAAAATAAGCTCAGATGGCAGCACAGAGCACACAAATGATATGA
CCGGATGATTTGATACGACTAATGATTAATTGGGAAGATATCTTTCATAG
AAGGGGCGGACTTTCAGACGTACGTCGGGTACTGGCTCGAAGTACGATGG
CTTGGACCTTGAGTCTCCATCTTCCGCCGTTGAACTGAATGCAAGGTAGC
TCTTTTCAGATGCCTCTAAAATCGGATCAAAATCAGCTGCTGGGGCTTTC
TCTGTTTCAATacatgtcttctcctcctcctctgtttctCCCCCTGACGG
GGATGAGGCTTCCAAAGCCATGGCCAAAGCCGCCTCCAAGCAATAAGAGC
CCTTCCCCTCAATTGTTGCGTCGTCATGATATATTACGCTGGTAATTTTG
CCGTTTCTTCTGGCTGAACTCATTTCTATAGGGTGTAGCGTGGAAAGGGT
TGtgggctgaggaggaggaggtagtcaAAAGCGCAACTCGGACCAAAAAA
CTTCAACCGACGGAAACGTCACCCGATTACAACCATTATCATGCTGACAA
CACGCCTCTTAACCAATATAGCATTCCTATAGCTTACAAAGGACCTTTGT
TTCCCTCTTGATATGTTATTGGTAGCCGTCTTTATTGAATTGACGGCCAT
TAATCCCTGTCTGGTACGGgcgggagacaagggggggtaggaggttaACG
CTTCCAGGGGGGTAGGAGACTTGCCTGCGTCAGACATTGGAGTCTTTCTT
ACACATGTTGAAAGCATAAGGAGCCGCTCTTAATGGGTCGATACTCTTCA
ATTGACACACGTGGACAGGACGCCGGGACTTGATCATTGCGTGACGCCGC
CAGGTGTCGTTTTGCTGGATTTACCGTTTCCGACTCTCAAGACGTTCGGG
CAAAGGACATTGTCGCCTGTCACCGATACCCTTTAATACCTTCGATTTCG
CTGCATCTGAATCGATAAACATGCATGTATGAAGGCCGTAGCAACCCAAC
CAGTCCACCGCCCATTGCTGTTTTGCCGCCGTTTCCTCGTGTTTaccgtc
gtcctctccctgacGGTGCTGACTTGcatctctccttcctacAACGCCTT
TGATCTTGTCCCCGCGCTCAGGACGGCAACGAGCAGAGACAAAGGAATTA
AAACTCGGGTCCGTAAACAAGTGTATTCGAAATTCAATGCAAATGGAGGG
AGATGTTACACTACCTTCCCCACTCTCTTAcaggcgcttcctcctccttc
gccggcACCCCCGTTCCTCTCACAGccatcccttctccttcgcttcgcca
ctccatcctcccctccctctcctccctccccccacgaaGCGAAACGCCGC
CGTCGAGCCATGGCCCGTCAGAGGCGACGGAGACGGCAcgcggaggaaag
agcggcGTTCCAGAACCAAACCTTGCATGCTCCCGGTCTCGTCCCCTCGC
AGGTAGCTAccttcctttgccctcccaaCTCATCGCATGGCTGTGAAGCG
GCGCGCCTTCGGCCTtcaccctccatccccacggGTGCCTACTCTGTTCG
TGCGTCCCCGTCCCGTCGCATTTCTCTGTACACCCTCGCCATTggctcct
cgctcccgccctctcacctcccccctttgaccagccgctccctcccacgc
cactTTTCTCGCCACTCTCCGCAGGTGtacctctcccctcgccaCAAAAA
gcggcctcccttccctgatCTTTCCACgaccccgacctcctcctcttcct
ccccctcttcctccgaggaggacgcccaGGACCTGATCGTCCTCGAAGTG
CCTGcctgtcctccgtccctccctccttcgccccccccctccctccctcc
ttcgccccctccttccctccctccttcgccccctccttcctctcctccct
ccccagcacCCTACCGACGAAGCGGGGACTGCCCCAACGTGCACTGGCGG
GCGATAcccttcccccacctgcGACaacacccctccttccaagccctccc
tccctcccgccctccctcccgcctggcCGACCTCCGTTTCTTTCGACAGG
ACTCGTGGGAGTGGAGAGCCTTGCACGTGGGGCGATTGACCACCTCCCGC
GTGGGGGGCTTGCTgggtggggacggggggagaagggagggagggaagga
gggagggaggaa back to topCoding sequence (CDS) from alignment at CM002467.1:96583..99744+ >rna5921 ID=rna5921|Name=rna5921|organism=Nannochloropsis gaditana|type=CDS|length=2661bp|location=Sequence derived from alignment at CM002467.1:96583..99744+ (Nannochloropsis gaditana)
ATGAAGGCCGTAGCAACCCAACCAGTCCACCGCCCATTGCTGTTTTGCCG
CCGTTTCCTCGTGTTTaccgtcgtcctctccctgacGGTGCTGACTTGca
tctctccttcctacAACGCCTTTGATCTTGTCCCCGCGCTCAGGACGGCA
ACGAGCAGAGACAAAGGAATTAAAACTCGGgcgcttcctcctccttcgcc
ggcACCCCCGTTCCTCTCACAGccatcccttctccttcgcttcgccactc
catcctcccctccctctcctccctccccccacgaaGCGAAACGCCGCCGT
CGAGCCATGGCCCGTCAGAGGCGACGGAGACGGCAcgcggaggaaagagc
ggcGTTCCAGAACCAAACCTTGCATGCTCCCGGTCTCGTCCCCTCGCAGG
TGtacctctcccctcgccaCAAAAAgcggcctcccttccctgatCTTTCC
ACgaccccgacctcctcctcttcctccccctcttcctccgaggaggacgc
ccaGGACCTGATCGTCCTCGAAGTGCCTGcctgtcctccgtccctccctc
cttcgccccccccctccctccctccttcgccccctccttccctccctcct
tcgccccctccttcctctcctccctccccagcacCCTACCGACGAAGCGG
GGACTGCCCCAACGTGCACTGGCGGGCGATAcccttcccccacctgcGAC
aacacccctccttccaagccctccctccctcccgccctccctcccgcctg
gcCGACCTCCGTTTCTTTCGACAGGACTCGTGGGAGTGGAGAGCCTTGCA
CGTGGGGCGATTGACCACCTCCCGCGTGGGGGGCTTGCTgggtggggacg
gggggagaagggagggagggaaggagggagggaggaaATGAAGGCCGTAG
CAACCCAACCAGTCCACCGCCCATTGCTGTTTTGCCGCCGTTTCCTCGTG
TTTaccgtcgtcctctccctgacGGTGCTGACTTGcatctctccttccta
cAACGCCTTTGATCTTGTCCCCGCGCTCAGGACGGCAACGAGCAGAGACA
AAGGAATTAAAACTCGGgcgcttcctcctccttcgccggcACCCCCGTTC
CTCTCACAGccatcccttctccttcgcttcgccactccatcctcccctcc
ctctcctccctccccccacgaaGCGAAACGCCGCCGTCGAGCCATGGCCC
GTCAGAGGCGACGGAGACGGCAcgcggaggaaagagcggcGTTCCAGAAC
CAAACCTTGCATGCTCCCGGTCTCGTCCCCTCGCAGGTGtacctctcccc
tcgccaCAAAAAgcggcctcccttccctgatCTTTCCACgaccccgacct
cctcctcttcctccccctcttcctccgaggaggacgcccaGGACCTGATC
GTCCTCGAAGTGCCTGcctgtcctccgtccctccctccttcgcccccccc
ctccctccctccttcgccccctccttccctccctccttcgccccctcctt
cctctcctccctccccagcacCCTACCGACGAAGCGGGGACTGCCCCAAC
GTGCACTGGCGGGCGATAcccttcccccacctgcGACaacacccctcctt
ccaagccctccctccctcccgccctccctcccgcctggcCGACCTCCGTT
TCTTTCGACAGGACTCGTGGGAGTGGAGAGCCTTGCACGTGGGGCGATTG
ACCACCTCCCGCGTGGGGGGCTTGCTgggtggggacggggggagaaggga
gggagggaaggagggagggaggaaATGAAGGCCGTAGCAACCCAACCAGT
CCACCGCCCATTGCTGTTTTGCCGCCGTTTCCTCGTGTTTaccgtcgtcc
tctccctgacGGTGCTGACTTGcatctctccttcctacAACGCCTTTGAT
CTTGTCCCCGCGCTCAGGACGGCAACGAGCAGAGACAAAGGAATTAAAAC
TCGGgcgcttcctcctccttcgccggcACCCCCGTTCCTCTCACAGccat
cccttctccttcgcttcgccactccatcctcccctccctctcctccctcc
ccccacgaaGCGAAACGCCGCCGTCGAGCCATGGCCCGTCAGAGGCGACG
GAGACGGCAcgcggaggaaagagcggcGTTCCAGAACCAAACCTTGCATG
CTCCCGGTCTCGTCCCCTCGCAGGTGtacctctcccctcgccaCAAAAAg
cggcctcccttccctgatCTTTCCACgaccccgacctcctcctcttcctc
cccctcttcctccgaggaggacgcccaGGACCTGATCGTCCTCGAAGTGC
CTGcctgtcctccgtccctccctccttcgccccccccctccctccctcct
tcgccccctccttccctccctccttcgccccctccttcctctcctccctc
cccagcacCCTACCGACGAAGCGGGGACTGCCCCAACGTGCACTGGCGGG
CGATAcccttcccccacctgcGACaacacccctccttccaagccctccct
ccctcccgccctccctcccgcctggcCGACCTCCGTTTCTTTCGACAGGA
CTCGTGGGAGTGGAGAGCCTTGCACGTGGGGCGATTGACCACCTCCCGCG
TGGGGGGCTTGCTgggtggggacggggggagaagggagggagggaaggag
ggagggaggaa back to top
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