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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100446g4.5998.mrna |
| Orig protein id | gnl|cribi|Naga_100446g4.5998 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:62487..64098 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5911 ID=rna5911|Name=rna5911|organism=Nannochloropsis gaditana|type=mRNA|length=1297bp
GTAGACACAGAGCACTGGGAATACTTTTCATCTCCTTGTCGGACTGAGTT
CATCGTGGACAGATTTTTCTACAAAATAGGAAACGCCTTGGGAAACTTTA
AGAGAGGTGAAATTATTTTGAGTTTTGGAGCCTCCGCATGCCTTCCATTG
CTTTACAACAACCTTCAATTGCCCCATACCCGAGGACTTTTCAATTTAAC
AGCGCTGTCTTTTTTCTCATTCGTACGCAATGATAATAAATTCCACCGCA
TTTAGGCCTTTGCGAGTTTCAAACTGCTTTGACCATCCTATACTTTTTCT
GTTGTGGCGCCACCCTTCACGAAGATCGGCGGCGCATGTCTCCTCCCTCC
CCCCGAAATGGAAGCAACACAGAAAGGCAGTGTCCGACGACGAAAACGCA
AGGTCAAAGGCACACGCACGCAAGATTGAAAATCGGCGGCTACAAAAAAA
ATGGAAAACTCGCCCTCGTCTTCGACCCCGAGGCCCGCCGGGAATATTTG
ACTGGCTTCAGCAAACGCAAAAAAGAACGGAGGACGTTCGGTCTGGCCAT
GCAACAGGTGAAAAATCGGAAAGCACGGCTTATGGAAAGGGAGGAGTTGC
GCAAGGCGAAAAAAGGGGCTTTGGATGACTTGCCGGCGTCCATAAAAGGA
GCGGAACCCTACCTCTCAGGGACAGCTCTGGCGAATGGAAAAGAAAAGGA
GACAATGGAAACAAAAGCGAAGGAAGAGGTATATGACGACCGATTCACTA
CGGCCACATTTGGGGAGTCAGTGTTGGTCACAACCTCTTTTGGCATTCCA
TCCGGTGACGAGGAAGATGAGGAGGGAGGGGTCCTCGCCATGGTCCGAGA
GGAGAGGAAAGGCGGCGGAGTCGACAAAGAGCAGCTGCAAGCAGGATCGG
TGGCACATTTTAAAAAACTAGTGGCGGGAAAAATGCCTGCGAAACCGAAG
AAAAAAGGTGGGAAGGAGAGGACGAAGCAGAATACGTCGGGATCCTACAT
GCCCAAAGGGAAGGGGCAGGGAGAGGAAGACAAGAAGACAGGAAAGAAAA
AGAAGAGAGGAAAACGTTGAGATTCGATGGAAAGAATGTCTGAATAAGGG
CGAGGCTTGAATGATGTGTAAATGAAGGGTCAGAAATTGGAAATTCAGGG
GTGAAGCTATGAGCTTTCATCACTGTCGGGCTGTCGCCGCCATGAAAAAA
ATGTGCAGTAATGACAAGGTAATGCAACGTCCTCGATCGGTTAATATGAT
GGTAAAATCGTTGCACGTTCATCTTTATAATCCTTATATTTTACCGC back to topprotein sequence of rna5911 >rna5911-protein ID=rna5911-protein|Name=rna5911|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MECADGVCKFVPRSQRGVQIGGNEENVEPALPLVSVGDKPPMPLIFETLE
EGGRSFSLQRLCAAGEDGGRVVVLDLWSNACVRCPEALDKLNQMSSACQE
DVKKHRVTFAAVNIDDKVKARALVAERQWDCLAHFYIDAGTKDTLKARFG
LQSVPFVMVFDQVGGGAGGGGRSRGRETADMWSRTLRDRRIGIRGQERFL
NPEFKSSWNVDKLSDLPQPARRSHDGGLQRLPTHEAGVAVLPPSLPPSLP
LLSGRYSQADGQPQEDRLGGTAGVVDRGATGQGGGGRGGARQGRSGLLLG back to topmRNA from alignment at CM002467.1:62487..64098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5911 ID=rna5911|Name=rna5911|organism=Nannochloropsis gaditana|type=mRNA|length=1612bp|location=Sequence derived from alignment at CM002467.1:62487..64098+ (Nannochloropsis gaditana)
TATACAGAACAAAACAGGGAGAGGTATCTCTGAACGCATGGAGTGTGCGG
ATGGTGTTTGTAAATTCGTCCCTCGAAGCCAGCGCGGTGTGCAGAtagga
gggaatgaggaaaaCGTGGAGCCTGCCCTGCCTCTCGTTTCGGTCGGTGA
CAAGCCTCCGATGCCACTGATATTCGAGACCctcgaagagggggggagga
gcttcAGTCTGCAACGTCTGTGCGcggcaggggaggatggaggtcgAGTG
GTGGTGCTGGGTGAGTCAACCATTGCacagggaggatggcggggggggaa
taGATGCAGGTTGACGAGCAAAGCAATGCGACGCAACCATTTGGCTTCAG
AGAAAGTGGTTGTCTTCAAAACATCATTCCGCAAGCGCGTTCCCATGCCC
AGACGTTGAGGACTTTTTCCACCCGCCACTGCCCCTTTCATGTCGCGCGC
CTTATACGCGGTCCCTTTTTTTCGTATCGCCATTCCCACTGGCAGATTTA
TGGTCGAATGCCTGCGTCAGATGCCCCGAGGCTTTGGACAAATTGAATCA
AATGTCTAGCGCCTGTCAGGAAGACGTGAAAAAGCACCGTGTTACATTTG
CGGCTGTGAACATTGATGACAAGGTAAAGGCCCGCGCCCTGGTCGCGGAG
AGGTGAGTCACGCAGCAGTaccaagggaggaaagaaggaagagggggtgt
GCGGTGGGATACGAAGCTGGCTAAGTTGAAGAGttcgaggggaaggatgg
aggcagggaggggagaggcgcAGGTgcatgacggggaggggaggaaaggc
ggggggggaggggggcttcACGAAGGATCAGTCGGATTCGTGTCAGTCTC
GAGGCTGAGATTAGGTGTATATTTGGGAGACAAACTTGCTATGAAAATTG
CTGCAAAGGAAGCTCTGACCCCATGCGAAGAGATGCTATTGCCaatctcc
ctcccatcctccttccctctctccctccctccctccccactaACACAACA
GGCAGTGGGACTGTTTGGCCCATTTTTACATCGATGCCGGGACCAAGGAC
ACGCTCAAGGCGCGCTTCGGTCTGCAAAGCGTGCCCTTTGTCATGGTCTT
CGACcaggtaggggggggggctggcggcggaggaagaagcaggggTCGAG
AAACCGCAGACATGTGGAGCAGGACCCTTAGGGACCGTCGCATCGGTATT
CGTGGGCAGGAGCGCTTCTTAAACCCTGAATTCAAAAGTTCTTGGAACGT
GGATAAACTCTCAGACCTTCCACAGCCCGCACGGCGGTCGCATGACGGGG
GGCTGCAGCGGCTTCCCACTCATGAAGCGGGCgttgccgtcctccctccc
tccctccctccctccctccctctcctctcagGACGGTATTCTCAGGCAGA
TGGGCAACCCCAAGAAGATCGATTGGGAGGCACTGCCGGcgttgtggacc
gaggaGCTAccggccagggggggggagggcgaggaggtgcCCGTCAAGGC
CGTTcaggccttctccttggaTGAAGATTTCTGAGGGAAGAACGCAGGCG
AGGGTAGAGAATTTGAGAAAAGGGCACAGTAAAAGGCAACAACCCGCACC
TTCTTGGAAAAA back to topCoding sequence (CDS) from alignment at CM002467.1:62487..64098+ >rna5911 ID=rna5911|Name=rna5911|organism=Nannochloropsis gaditana|type=CDS|length=2709bp|location=Sequence derived from alignment at CM002467.1:62487..64098+ (Nannochloropsis gaditana)
ATGGAGTGTGCGGATGGTGTTTGTAAATTCGTCCCTCGAAGCCAGCGCGG
TGTGCAGAtaggagggaatgaggaaaaCGTGGAGCCTGCCCTGCCTCTCG
TTTCGGTCGGTGACAAGCCTCCGATGCCACTGATATTCGAGACCctcgaa
gagggggggaggagcttcAGTCTGCAACGTCTGTGCGcggcaggggagga
tggaggtcgAGTGGTGGTGCTGGATTTATGGTCGAATGCCTGCGTCAGAT
GCCCCGAGGCTTTGGACAAATTGAATCAAATGTCTAGCGCCTGTCAGGAA
GACGTGAAAAAGCACCGTGTTACATTTGCGGCTGTGAACATTGATGACAA
GGTAAAGGCCCGCGCCCTGGTCGCGGAGAGGCAGTGGGACTGTTTGGCCC
ATTTTTACATCGATGCCGGGACCAAGGACACGCTCAAGGCGCGCTTCGGT
CTGCAAAGCGTGCCCTTTGTCATGGTCTTCGACcaggtaggggggggggc
tggcggcggaggaagaagcaggggTCGAGAAACCGCAGACATGTGGAGCA
GGACCCTTAGGGACCGTCGCATCGGTATTCGTGGGCAGGAGCGCTTCTTA
AACCCTGAATTCAAAAGTTCTTGGAACGTGGATAAACTCTCAGACCTTCC
ACAGCCCGCACGGCGGTCGCATGACGGGGGGCTGCAGCGGCTTCCCACTC
ATGAAGCGGGCgttgccgtcctccctccctccctccctccctccctccct
ctcctctcagGACGGTATTCTCAGGCAGATGGGCAACCCCAAGAAGATCG
ATTGGGAGGCACTGCCGGcgttgtggaccgaggaGCTAccggccaggggg
ggggagggcgaggaggtgcCCGTCAAGGCCGTTcaggccttctccttgga
TGAATGGAGTGTGCGGATGGTGTTTGTAAATTCGTCCCTCGAAGCCAGCG
CGGTGTGCAGAtaggagggaatgaggaaaaCGTGGAGCCTGCCCTGCCTC
TCGTTTCGGTCGGTGACAAGCCTCCGATGCCACTGATATTCGAGACCctc
gaagagggggggaggagcttcAGTCTGCAACGTCTGTGCGcggcagggga
ggatggaggtcgAGTGGTGGTGCTGGATTTATGGTCGAATGCCTGCGTCA
GATGCCCCGAGGCTTTGGACAAATTGAATCAAATGTCTAGCGCCTGTCAG
GAAGACGTGAAAAAGCACCGTGTTACATTTGCGGCTGTGAACATTGATGA
CAAGGTAAAGGCCCGCGCCCTGGTCGCGGAGAGGCAGTGGGACTGTTTGG
CCCATTTTTACATCGATGCCGGGACCAAGGACACGCTCAAGGCGCGCTTC
GGTCTGCAAAGCGTGCCCTTTGTCATGGTCTTCGACcaggtagggggggg
ggctggcggcggaggaagaagcaggggTCGAGAAACCGCAGACATGTGGA
GCAGGACCCTTAGGGACCGTCGCATCGGTATTCGTGGGCAGGAGCGCTTC
TTAAACCCTGAATTCAAAAGTTCTTGGAACGTGGATAAACTCTCAGACCT
TCCACAGCCCGCACGGCGGTCGCATGACGGGGGGCTGCAGCGGCTTCCCA
CTCATGAAGCGGGCgttgccgtcctccctccctccctccctccctccctc
cctctcctctcagGACGGTATTCTCAGGCAGATGGGCAACCCCAAGAAGA
TCGATTGGGAGGCACTGCCGGcgttgtggaccgaggaGCTAccggccagg
gggggggagggcgaggaggtgcCCGTCAAGGCCGTTcaggccttctcctt
ggaTGAATGGAGTGTGCGGATGGTGTTTGTAAATTCGTCCCTCGAAGCCA
GCGCGGTGTGCAGAtaggagggaatgaggaaaaCGTGGAGCCTGCCCTGC
CTCTCGTTTCGGTCGGTGACAAGCCTCCGATGCCACTGATATTCGAGACC
ctcgaagagggggggaggagcttcAGTCTGCAACGTCTGTGCGcggcagg
ggaggatggaggtcgAGTGGTGGTGCTGGATTTATGGTCGAATGCCTGCG
TCAGATGCCCCGAGGCTTTGGACAAATTGAATCAAATGTCTAGCGCCTGT
CAGGAAGACGTGAAAAAGCACCGTGTTACATTTGCGGCTGTGAACATTGA
TGACAAGGTAAAGGCCCGCGCCCTGGTCGCGGAGAGGCAGTGGGACTGTT
TGGCCCATTTTTACATCGATGCCGGGACCAAGGACACGCTCAAGGCGCGC
TTCGGTCTGCAAAGCGTGCCCTTTGTCATGGTCTTCGACcaggtaggggg
gggggctggcggcggaggaagaagcaggggTCGAGAAACCGCAGACATGT
GGAGCAGGACCCTTAGGGACCGTCGCATCGGTATTCGTGGGCAGGAGCGC
TTCTTAAACCCTGAATTCAAAAGTTCTTGGAACGTGGATAAACTCTCAGA
CCTTCCACAGCCCGCACGGCGGTCGCATGACGGGGGGCTGCAGCGGCTTC
CCACTCATGAAGCGGGCgttgccgtcctccctccctccctccctccctcc
ctccctctcctctcagGACGGTATTCTCAGGCAGATGGGCAACCCCAAGA
AGATCGATTGGGAGGCACTGCCGGcgttgtggaccgaggaGCTAccggcc
agggggggggagggcgaggaggtgcCCGTCAAGGCCGTTcaggccttctc
cttggaTGA back to top
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