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Properties
| Property Name | Value |
|---|
| Product | Barwin-related endoglucanase |
| Orig transcript id | gnl|cribi|Naga_100129g3.1885.mrna |
| Orig protein id | gnl|cribi|Naga_100129g3.1885 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:172635..174608 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna59 ID=rna59|Name=rna59|organism=Nannochloropsis gaditana|type=mRNA|length=1656bp
ATGCAAAACACGGGCGCCTCGAAAGGCTTCGGATTTGTCTGCTACTCCAC
GCCCGAAGAAGCCTCGGCCGCCATCCAGAAGATGAACAACAAGATGTTCG
TGGGGAAACCCGTCTACGTGGCGCTCTCCCAAGTCGCGTCCCAACGCCGG
GAAATGCTGGCCGTCTCCTTCCAACAACAACAACAACAACGGGGTATGAT
CCCCCCCATGCAGAACGCCCCCTTTTACCCACCACCGGCAGGGATGGGGA
TGCAGCAGCCCCCGTACCTGTCGATGGGCCCATACGGACAGCCCATGCGC
GGGCCGGGAGGAATGTTGCCACAACGAGGGATGCCGTTGAATCCGGGCAT
GATGCGGCCCATGTACCGCATGCCTGACTACCGGCGCCAAGACATGGGGG
GAATGGAGGGCGGTCCGGGCGGGCTGATGGGCGGCCGACCGGGAGGACCA
GGGGGGCCGAAACAGGCCTACAATCAGCGGCACCAAGGACAGCAACAGGG
AGGAGGTATCCGTGGGCGGCAGCAGGGTCGGATGGTGCAGGCCGGACCTG
GGGGGATGATGGGTGGGGGCATGCCGCAGCACATGCAGGCGCCGATGGGG
GGTCCGGCGGAGGGAGGGTACCAGCACGGGCAGGAAGGCGTGCAAGGGGG
AGCCCCGCAAGGAGGGGCGATCGACCCCACGCGTCTGGCATCGGCCTCGT
TGGAGGAGCAGAAGACGATTTTGGGAGAACAGTTGTACCCTCTGATTGTG
CGACGGGAGCCTGAGTTGGCCGGGAAAATCACGGGGATGATTTTGGAGCT
GGACAATACGGAAATCCTTCATTTGCTCGAATCTCCGGAGTCTTTGGACG
AAAAAGTGCAGGAGGCGATCAAGGTGCTCCAAGAATTCAACACGCACGTC
AAGGACGGCTCGGAGTAACGGGGGTGGACCGAGGCATGTGGAAAGGTCCT
TGTGGTGGAGGGAAATCTGCACTGGGGAGATGCGGCAGGTTTTGTGTATG
CGACTTGTCGCGGTGTTGTGGCAGACTGCGAGGACAAGGGAGGTTGGTAA
GGGACGGTGGATGGAAGACTCGAGGGCGGTATGATTGTGTGACTGGACAC
ACTCGTTTAAATGCTGGGGGGCCCTGGAAGGCATCTGGACGTTAGAGACG
TCTAGCGGATACTCACGGAGAAGGGTTACGGTTGCAGTATCACCCATTCT
GCTTTTCATTTCATCCGAAGATGTTATGTGCGCGATAGTTGTCTCTGTGT
TGGAAACACCTCATGACGGAGGTGTTGTTGGATGAAAGCAGTGGGATCTT
AGAGACAATTTTAGTCTCGTGGAAGGGTCGTTTGCCGAATCAACTGCCTT
CCATAGCCGGAGATGAGGCAGCTCGAACAAGTGTGGGAGAGGGACGTTGT
GGTGGACGGGGCGCACTGGCTTACCCCCATATTCATATAGGCCACCTCGT
TTGCGACTTTTACTATATAGCAAGGATAAGAATTAGAGAGAACAGAAATG
CCGAGAGCCTGGGTGAGGGGTGACTTGGGGCTATGAAGTCAAACGGAGTT
TTTCATTTTAAATCCACGACACCGAGCTAGACTCAGAAGAGCATGAATGA
GGCAGCTGCCGAAAAACGAGAACAAAAAGGAAAAAAATGCAATATTTCTT
CTTGCG back to topprotein sequence of rna59 >rna59-protein ID=rna59-protein|Name=rna59|organism=Nannochloropsis gaditana|type=polypeptide|length=344bp
MRLSGLHIGYFCAVSAVQLGSIALAEGAGSDEWFIKPIRGRSTYYGNYGG
GGACGLDQPDGSAIPAEIQGIDFTVALDQPQFDVGGCGMCILLNGTGVGA
GGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHK
IRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRD
GAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYTLQAEELTSEMTRG
ATWEGESGLDDDLEGSSTTPDENLMTKERIGEGLVPRKLKESRRDVGGEP
TRRGAREANESDASNKQSTSQIGTANLVSSQSRLRGIKASNEHQ back to topmRNA from alignment at CM002455.1:172635..174608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna59 ID=rna59|Name=rna59|organism=Nannochloropsis gaditana|type=mRNA|length=1974bp|location=Sequence derived from alignment at CM002455.1:172635..174608+ (Nannochloropsis gaditana)
GCACGCGCGGCCGTCATACCGTTGTAGGATAATGCGACTCTCTGGCCTCC
ACATTGGATATTTCTGTGCAGTATCGGCCGTACAACTTGGCTCGATAGCC
CTGGCGGAGGGTGCTGGGTCAGATGAATGGTTTATTAAGCCTATTCGCGG
TCGGGTAAGTACGGTTTCTCATAAAGAATGAGTAATTAAAAAGATGTCAG
AGAATGTACAAATGAAGGAAACCAGCAAGTCTCATCTTTCAAATATTTAT
TTTCATTCTTCgatattttttttaattaTCCACTCATGCCCTCAGTCAAC
CTACTATGGCAACtacggaggggggggcgcatGCGGTTTAGACCAGCCCG
ATGGCTCGGCAATTCCCGCCGAGGTGCGCTTTTGCAATTTACTCCTTCAC
GTTTGTGTTTTTGGTTGTTTTCCGGTGTAAGTATTTAGTTTCAACATACg
tgtcctccatttcctctccaACCATCTGCAGATTCAGGGCATCGACTTTA
CAGTTGCCTTGGATCAGCCTCAGTTTGACGTGGGAGGATGCGGGATGTGC
ATTTTGCTGAACGGCACAGGTGTTGGTGCAGGTGGGAACCCTGTCAATGG
TATTTATACAGCGTTTGTGAACAATCTGTGTCCCGAGTGTGAGTATGGTC
ATCTGGACTTTGCGCTTCCTGGAGATGGTAGCTGGGAGATTGAGTGGTAC
GTAGAgtgcgaggggggaaaaggatacACGAAAGGTGTCCACAGGACGCG
AAAAAACATAAATTAGATATTCAAACATCGAGTTCTATTTCCAAAATGGT
GGGACGGATGCGCTCGTAGAGAGAGGAACGGGTGCTCCACGACCAACATA
TCTTCTCATTCCCTGCGGGCTTTGTATCGATGTACACGGACAGGAAAGCC
ATTCCCTGCGATGTGAGGGACCATAAAATACGATTTGTTTTCATGGTACG
CACGGTCAAAGGCGCTTGCCGACCATTTCTGTCTCCTTCAAAACGCGATG
AGGAAATTTCCCATTGTTTCCTCGCTGACCCCCGTTCCCCTTTCCaaccc
cttctttcttctttttgtttCCAACTCAAGGGCTCGAATGACTTCTATTT
AAAAGTGTCGACCCAAGCGTCGCGCTTTCCCACCAAAGCCCTGCGATTGA
AaatgggaggggagtggagggagggttggccCGTACACGGGTCCTACTTT
GAGTTTCGGGACGGAGCTCCCTTTACATTTCCGATGGAAGTAGAAATTAC
GTCCGTTTTTGGAGAGGTTTTGACTGATTGGATCGAGTCCCTGCAGGTAA
GGTCGCGAGAGAATAAGGCTTTCAGGATGGGAGATGGGTACGAGGGAGAC
ATAGGGGGAAAACGGCGCGATAGGTGCGCTGTGTAGATTGGAAAGGACAT
GAATGTATCATGAAGCGGTAATACGACGTTCAGCGACTGCATTTCAAAGC
CCTTCTACTGCCTTACATGCCATTAGGGGGGGCCTAGCACCATCCAATAC
ACGCTGCAAGCCGAAGAGCTGACATCAGAAATGACCAGGGGTGCcacctg
ggagggagagtcgGGCCTCGACGACGACCTCGAAGGATCATCCACTACCC
CAGACGAGAACCTCAtgacgaaggaaaggattgGGGAGGGTTTGGTGCCA
CGGAAGCTTAAAGAGTCGCGGAGGGATGTGGGAGGGGAGCCGACGCggag
aggagcgagagaggcGAATGAAAGTGATGCGTCAAACAAGCAATCTACAT
CACAGATTGGGACAGCCAATTTGGTGTCTTCCCAATCACGTCTACGTGGG
ATCAAAGCGAGCAACGAGCATCAATAATTAACAGAGGTATATATGCATAT
ATAAGAGCAAGAATGGATTTCAGCTCGAATAAGTAGGGGTGCTTTCTAGC
TGTCTTCGAGTGATTTTTGGTCAAAGGGTAAAATATGACACCACATGATG
CAACCAAGACACACTACATGACTC back to topCoding sequence (CDS) from alignment at CM002455.1:172635..174608+ >rna59 ID=rna59|Name=rna59|organism=Nannochloropsis gaditana|type=CDS|length=6210bp|location=Sequence derived from alignment at CM002455.1:172635..174608+ (Nannochloropsis gaditana)
ATGCGACTCTCTGGCCTCCACATTGGATATTTCTGTGCAGTATCGGCCGT
ACAACTTGGCTCGATAGCCCTGGCGGAGGGTGCTGGGTCAGATGAATGGT
TTATTAAGCCTATTCGCGGTCGGTCAACCTACTATGGCAACtacggaggg
gggggcgcatGCGGTTTAGACCAGCCCGATGGCTCGGCAATTCCCGCCGA
GATTCAGGGCATCGACTTTACAGTTGCCTTGGATCAGCCTCAGTTTGACG
TGGGAGGATGCGGGATGTGCATTTTGCTGAACGGCACAGGTGTTGGTGCA
GGTGGGAACCCTGTCAATGGTATTTATACAGCGTTTGTGAACAATCTGTG
TCCCGAGTGTGAGTATGGTCATCTGGACTTTGCGCTTCCTGGAGATGGTA
GCTGGGAGATTGAGTGGAAAGCCATTCCCTGCGATGTGAGGGACCATAAA
ATACGATTTGTTTTCATGGGCTCGAATGACTTCTATTTAAAAGTGTCGAC
CCAAGCGTCGCGCTTTCCCACCAAAGCCCTGCGATTGAAaatgggagggg
agtggagggagggttggccCGTACACGGGTCCTACTTTGAGTTTCGGGAC
GGAGCTCCCTTTACATTTCCGATGGAAGTAGAAATTACGTCCGTTTTTGG
AGAGGTTTTGACTGATTGGATCGAGTCCCTGCAGGGGGGGCCTAGCACCA
TCCAATACACGCTGCAAGCCGAAGAGCTGACATCAGAAATGACCAGGGGT
GCcacctgggagggagagtcgGGCCTCGACGACGACCTCGAAGGATCATC
CACTACCCCAGACGAGAACCTCAtgacgaaggaaaggattgGGGAGGGTT
TGGTGCCACGGAAGCTTAAAGAGTCGCGGAGGGATGTGGGAGGGGAGCCG
ACGCggagaggagcgagagaggcGAATGAAAGTGATGCGTCAAACAAGCA
ATCTACATCACAGATTGGGACAGCCAATTTGGTGTCTTCCCAATCACGTC
TACGTGGGATCAAAGCGAGCAACGAGCATCAATAAATGCGACTCTCTGGC
CTCCACATTGGATATTTCTGTGCAGTATCGGCCGTACAACTTGGCTCGAT
AGCCCTGGCGGAGGGTGCTGGGTCAGATGAATGGTTTATTAAGCCTATTC
GCGGTCGGTCAACCTACTATGGCAACtacggaggggggggcgcatGCGGT
TTAGACCAGCCCGATGGCTCGGCAATTCCCGCCGAGATTCAGGGCATCGA
CTTTACAGTTGCCTTGGATCAGCCTCAGTTTGACGTGGGAGGATGCGGGA
TGTGCATTTTGCTGAACGGCACAGGTGTTGGTGCAGGTGGGAACCCTGTC
AATGGTATTTATACAGCGTTTGTGAACAATCTGTGTCCCGAGTGTGAGTA
TGGTCATCTGGACTTTGCGCTTCCTGGAGATGGTAGCTGGGAGATTGAGT
GGAAAGCCATTCCCTGCGATGTGAGGGACCATAAAATACGATTTGTTTTC
ATGGGCTCGAATGACTTCTATTTAAAAGTGTCGACCCAAGCGTCGCGCTT
TCCCACCAAAGCCCTGCGATTGAAaatgggaggggagtggagggagggtt
ggccCGTACACGGGTCCTACTTTGAGTTTCGGGACGGAGCTCCCTTTACA
TTTCCGATGGAAGTAGAAATTACGTCCGTTTTTGGAGAGGTTTTGACTGA
TTGGATCGAGTCCCTGCAGGGGGGGCCTAGCACCATCCAATACACGCTGC
AAGCCGAAGAGCTGACATCAGAAATGACCAGGGGTGCcacctgggaggga
gagtcgGGCCTCGACGACGACCTCGAAGGATCATCCACTACCCCAGACGA
GAACCTCAtgacgaaggaaaggattgGGGAGGGTTTGGTGCCACGGAAGC
TTAAAGAGTCGCGGAGGGATGTGGGAGGGGAGCCGACGCggagaggagcg
agagaggcGAATGAAAGTGATGCGTCAAACAAGCAATCTACATCACAGAT
TGGGACAGCCAATTTGGTGTCTTCCCAATCACGTCTACGTGGGATCAAAG
CGAGCAACGAGCATCAATAAATGCGACTCTCTGGCCTCCACATTGGATAT
TTCTGTGCAGTATCGGCCGTACAACTTGGCTCGATAGCCCTGGCGGAGGG
TGCTGGGTCAGATGAATGGTTTATTAAGCCTATTCGCGGTCGGTCAACCT
ACTATGGCAACtacggaggggggggcgcatGCGGTTTAGACCAGCCCGAT
GGCTCGGCAATTCCCGCCGAGATTCAGGGCATCGACTTTACAGTTGCCTT
GGATCAGCCTCAGTTTGACGTGGGAGGATGCGGGATGTGCATTTTGCTGA
ACGGCACAGGTGTTGGTGCAGGTGGGAACCCTGTCAATGGTATTTATACA
GCGTTTGTGAACAATCTGTGTCCCGAGTGTGAGTATGGTCATCTGGACTT
TGCGCTTCCTGGAGATGGTAGCTGGGAGATTGAGTGGAAAGCCATTCCCT
GCGATGTGAGGGACCATAAAATACGATTTGTTTTCATGGGCTCGAATGAC
TTCTATTTAAAAGTGTCGACCCAAGCGTCGCGCTTTCCCACCAAAGCCCT
GCGATTGAAaatgggaggggagtggagggagggttggccCGTACACGGGT
CCTACTTTGAGTTTCGGGACGGAGCTCCCTTTACATTTCCGATGGAAGTA
GAAATTACGTCCGTTTTTGGAGAGGTTTTGACTGATTGGATCGAGTCCCT
GCAGGGGGGGCCTAGCACCATCCAATACACGCTGCAAGCCGAAGAGCTGA
CATCAGAAATGACCAGGGGTGCcacctgggagggagagtcgGGCCTCGAC
GACGACCTCGAAGGATCATCCACTACCCCAGACGAGAACCTCAtgacgaa
ggaaaggattgGGGAGGGTTTGGTGCCACGGAAGCTTAAAGAGTCGCGGA
GGGATGTGGGAGGGGAGCCGACGCggagaggagcgagagaggcGAATGAA
AGTGATGCGTCAAACAAGCAATCTACATCACAGATTGGGACAGCCAATTT
GGTGTCTTCCCAATCACGTCTACGTGGGATCAAAGCGAGCAACGAGCATC
AATAAATGCGACTCTCTGGCCTCCACATTGGATATTTCTGTGCAGTATCG
GCCGTACAACTTGGCTCGATAGCCCTGGCGGAGGGTGCTGGGTCAGATGA
ATGGTTTATTAAGCCTATTCGCGGTCGGTCAACCTACTATGGCAACtacg
gaggggggggcgcatGCGGTTTAGACCAGCCCGATGGCTCGGCAATTCCC
GCCGAGATTCAGGGCATCGACTTTACAGTTGCCTTGGATCAGCCTCAGTT
TGACGTGGGAGGATGCGGGATGTGCATTTTGCTGAACGGCACAGGTGTTG
GTGCAGGTGGGAACCCTGTCAATGGTATTTATACAGCGTTTGTGAACAAT
CTGTGTCCCGAGTGTGAGTATGGTCATCTGGACTTTGCGCTTCCTGGAGA
TGGTAGCTGGGAGATTGAGTGGAAAGCCATTCCCTGCGATGTGAGGGACC
ATAAAATACGATTTGTTTTCATGGGCTCGAATGACTTCTATTTAAAAGTG
TCGACCCAAGCGTCGCGCTTTCCCACCAAAGCCCTGCGATTGAAaatggg
aggggagtggagggagggttggccCGTACACGGGTCCTACTTTGAGTTTC
GGGACGGAGCTCCCTTTACATTTCCGATGGAAGTAGAAATTACGTCCGTT
TTTGGAGAGGTTTTGACTGATTGGATCGAGTCCCTGCAGGGGGGGCCTAG
CACCATCCAATACACGCTGCAAGCCGAAGAGCTGACATCAGAAATGACCA
GGGGTGCcacctgggagggagagtcgGGCCTCGACGACGACCTCGAAGGA
TCATCCACTACCCCAGACGAGAACCTCAtgacgaaggaaaggattgGGGA
GGGTTTGGTGCCACGGAAGCTTAAAGAGTCGCGGAGGGATGTGGGAGGGG
AGCCGACGCggagaggagcgagagaggcGAATGAAAGTGATGCGTCAAAC
AAGCAATCTACATCACAGATTGGGACAGCCAATTTGGTGTCTTCCCAATC
ACGTCTACGTGGGATCAAAGCGAGCAACGAGCATCAATAAATGCGACTCT
CTGGCCTCCACATTGGATATTTCTGTGCAGTATCGGCCGTACAACTTGGC
TCGATAGCCCTGGCGGAGGGTGCTGGGTCAGATGAATGGTTTATTAAGCC
TATTCGCGGTCGGTCAACCTACTATGGCAACtacggaggggggggcgcat
GCGGTTTAGACCAGCCCGATGGCTCGGCAATTCCCGCCGAGATTCAGGGC
ATCGACTTTACAGTTGCCTTGGATCAGCCTCAGTTTGACGTGGGAGGATG
CGGGATGTGCATTTTGCTGAACGGCACAGGTGTTGGTGCAGGTGGGAACC
CTGTCAATGGTATTTATACAGCGTTTGTGAACAATCTGTGTCCCGAGTGT
GAGTATGGTCATCTGGACTTTGCGCTTCCTGGAGATGGTAGCTGGGAGAT
TGAGTGGAAAGCCATTCCCTGCGATGTGAGGGACCATAAAATACGATTTG
TTTTCATGGGCTCGAATGACTTCTATTTAAAAGTGTCGACCCAAGCGTCG
CGCTTTCCCACCAAAGCCCTGCGATTGAAaatgggaggggagtggaggga
gggttggccCGTACACGGGTCCTACTTTGAGTTTCGGGACGGAGCTCCCT
TTACATTTCCGATGGAAGTAGAAATTACGTCCGTTTTTGGAGAGGTTTTG
ACTGATTGGATCGAGTCCCTGCAGGGGGGGCCTAGCACCATCCAATACAC
GCTGCAAGCCGAAGAGCTGACATCAGAAATGACCAGGGGTGCcacctggg
agggagagtcgGGCCTCGACGACGACCTCGAAGGATCATCCACTACCCCA
GACGAGAACCTCAtgacgaaggaaaggattgGGGAGGGTTTGGTGCCACG
GAAGCTTAAAGAGTCGCGGAGGGATGTGGGAGGGGAGCCGACGCggagag
gagcgagagaggcGAATGAAAGTGATGCGTCAAACAAGCAATCTACATCA
CAGATTGGGACAGCCAATTTGGTGTCTTCCCAATCACGTCTACGTGGGAT
CAAAGCGAGCAACGAGCATCAATAAATGCGACTCTCTGGCCTCCACATTG
GATATTTCTGTGCAGTATCGGCCGTACAACTTGGCTCGATAGCCCTGGCG
GAGGGTGCTGGGTCAGATGAATGGTTTATTAAGCCTATTCGCGGTCGGTC
AACCTACTATGGCAACtacggaggggggggcgcatGCGGTTTAGACCAGC
CCGATGGCTCGGCAATTCCCGCCGAGATTCAGGGCATCGACTTTACAGTT
GCCTTGGATCAGCCTCAGTTTGACGTGGGAGGATGCGGGATGTGCATTTT
GCTGAACGGCACAGGTGTTGGTGCAGGTGGGAACCCTGTCAATGGTATTT
ATACAGCGTTTGTGAACAATCTGTGTCCCGAGTGTGAGTATGGTCATCTG
GACTTTGCGCTTCCTGGAGATGGTAGCTGGGAGATTGAGTGGAAAGCCAT
TCCCTGCGATGTGAGGGACCATAAAATACGATTTGTTTTCATGGGCTCGA
ATGACTTCTATTTAAAAGTGTCGACCCAAGCGTCGCGCTTTCCCACCAAA
GCCCTGCGATTGAAaatgggaggggagtggagggagggttggccCGTACA
CGGGTCCTACTTTGAGTTTCGGGACGGAGCTCCCTTTACATTTCCGATGG
AAGTAGAAATTACGTCCGTTTTTGGAGAGGTTTTGACTGATTGGATCGAG
TCCCTGCAGGGGGGGCCTAGCACCATCCAATACACGCTGCAAGCCGAAGA
GCTGACATCAGAAATGACCAGGGGTGCcacctgggagggagagtcgGGCC
TCGACGACGACCTCGAAGGATCATCCACTACCCCAGACGAGAACCTCAtg
acgaaggaaaggattgGGGAGGGTTTGGTGCCACGGAAGCTTAAAGAGTC
GCGGAGGGATGTGGGAGGGGAGCCGACGCggagaggagcgagagaggcGA
ATGAAAGTGATGCGTCAAACAAGCAATCTACATCACAGATTGGGACAGCC
AATTTGGTGTCTTCCCAATCACGTCTACGTGGGATCAAAGCGAGCAACGA
GCATCAATAA back to top
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