EWM30607.1, cds59 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|585113279|gb|EWM30607.1| (Barwin-related endoglucanase [Nannochloropsis gaditana]) HSP 1 Score: 709.909 bits (1831), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MRLSGLHIGYFCAVSAVQLGSIALAEGAGSDEWFIKPIRGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQFDVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYTLQAEELTSEMTRGATWEGESGLDDDLEGSSTTPDENLMTKERIGEGLVPRKLKESRRDVGGEPTRRGAREANESDASNKQSTSQIGTANLVSSQSRLRGIKASNEHQ 344
MRLSGLHIGYFCAVSAVQLGSIALAEGAGSDEWFIKPIRGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQFDVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYTLQAEELTSEMTRGATWEGESGLDDDLEGSSTTPDENLMTKERIGEGLVPRKLKESRRDVGGEPTRRGAREANESDASNKQSTSQIGTANLVSSQSRLRGIKASNEHQ
Sbjct: 1 MRLSGLHIGYFCAVSAVQLGSIALAEGAGSDEWFIKPIRGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQFDVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYTLQAEELTSEMTRGATWEGESGLDDDLEGSSTTPDENLMTKERIGEGLVPRKLKESRRDVGGEPTRRGAREANESDASNKQSTSQIGTANLVSSQSRLRGIKASNEHQ 344
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|676439295|ref|XP_009048807.1| (hypothetical protein LOTGIDRAFT_157978 [Lottia gigantea] >gi|556112036|gb|ESP00688.1| hypothetical protein LOTGIDRAFT_157978 [Lottia gigantea]) HSP 1 Score: 134.806 bits (338), Expect = 5.267e-34 Identity = 81/210 (38.57%), Postives = 116/210 (55.24%), Query Frame = 0
Query: 39 RGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGI--DFTVALDQPQFDVGG--CGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDGAPF-TFPMEVEITSVFGEVLTDWIESLQG-----GPSTIQYTL 238
G TYYG GG C D P S PA + I +F VAL++PQF +G CGMC +N G G G NP+ G + FV +LCPEC+ G LDFA+ GDG W+IE +A+ C V + K+ + F GSN +Y+K+ + +R P A+++K G W+ ++ D P T ++V+IT+ GE + D I L G +Q+ L
Sbjct: 34 NGDGTYYGP-TDGGTCQYDPP--SKPPAGLNPIIRNF-VALNKPQF-LGSYSCGMCFKVNSNGQGLGTNPIKGHFVVFVADLCPECKTGSLDFAINGDGRWKIEIQAVQCPVGNTKLEYKFQGSNSYYIKLQIRNARIPAVAVKIKQNGSWKAMSHSADGFWILSDQKPVPTHNIDVQITAANGETVHDTIPELVNAKVLHGSQKVQFAL 238
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|1207919096|ref|XP_021348420.1| (uncharacterized protein LOC110447205 [Mizuhopecten yessoensis] >gi|1205905811|gb|OWF52840.1| Expansin-YoaJ [Mizuhopecten yessoensis]) HSP 1 Score: 129.028 bits (323), Expect = 7.568e-32 Identity = 78/223 (34.98%), Postives = 110/223 (49.33%), Query Frame = 0
Query: 16 AVQLGSIALAEGAGSDE---WFIKPIRGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQF-DVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDG---------APFTFPMEVEITSVFGEVLTDWIE 225
+ L + LA G+ + + RG TYYG G G C PD + A+ I VAL+ PQF CGMC +NGTG G G +P+NG + FV +LCPEC G +DFA GDG W I +AI C V + I + F GSND+YLK+ + +R P + E R+ + S+ DG P +P+ + +T+ G+ + D I
Sbjct: 6 TILLSVLTLANGSHEHDIINLYKHNFRGDGTYYG-VGSSGTCSYTPPDLPPV-AKNHAITDYVALNSPQFFGSLACGMCFTVNGTGHGLGNDPINGQHIVFVKDLCPECHAGSVDFAKNGDGRWGISIRAIQCPVGNTPIEYKFQGSNDYYLKLQVRNARIPATKV------EMRQQDNHYASFQHTTDGFWTMGAGFDKPVRYPIHLRLTAANGDTVLDTIH 220
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|545372147|ref|XP_005650571.1| (hypothetical protein COCSUDRAFT_40205 [Coccomyxa subellipsoidea C-169] >gi|384252551|gb|EIE26027.1| hypothetical protein COCSUDRAFT_40205 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 132.494 bits (332), Expect = 1.024e-31 Identity = 72/213 (33.80%), Postives = 112/213 (52.58%), Query Frame = 0
Query: 39 RGRSTYYGNYGGG---GACGLDQPDGSAIPAEIQ-GIDFTVALDQPQFDVG-GCGMCILLNGTGVGAGGNPVNGI--YTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEW-------REGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYT 237
+G T+YG G G C ++ + + G D T+AL+ QF+ G GCG+CI GTG G G P + T FVNN CPEC +G +D GDG W++EW A+PC+V D +R+ + S+ ++ + +R P + +K+ GEW WP + ++ ++ +FPM + +TSV GE + D I S +GG Q++
Sbjct: 37 KGEGTFYGQQDGQDAQGTCSYNENFANTVKLPWSSGTDMTIALNDAQFENGNGCGLCIKFRGTGAGLGTTPPSTTEWKTGFVNNRCPECAFGDIDMNSRGDGRWKVEWYAVPCNVADTPLRYDIVVSSYYWFSLVVSNTRVPIAGVEVKLNGEWLPLKRTVNNQWPYYNTHGPWQS----SFPMPIRVTSVTGETIEDTITSAKGGDGAKQFS 245
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|908417500|ref|XP_013070046.1| (PREDICTED: expansin-YoaJ-like isoform X1 [Biomphalaria glabrata]) HSP 1 Score: 121.709 bits (304), Expect = 4.492e-29 Identity = 70/198 (35.35%), Postives = 107/198 (54.04%), Query Frame = 0
Query: 32 EWFIKPIRGRSTYYGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQF-DVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWRE-GWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESL 227
+ F K +G TYYG G C + +P A A I VAL++PQF + CGMCI + G+G G G NP+ G + +V ++CP C G +DFAL GDG W I +A+ C V I++ F GSN +Y+K+ + +R P ++++ G W+ + G + GA P++V +T+ G+VL D I +
Sbjct: 30 DLFTKSYKGDGTYYGETVDG-TCQIARPLPMA--ASDPKISALVALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIEKNGAWQTLTHSIDGYWLLSGGGAIADGPIKVRMTAANGQVLEDMIPRI 224
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|762075411|ref|XP_011442014.1| (PREDICTED: uncharacterized protein LOC105338530 [Crassostrea gigas] >gi|405966040|gb|EKC31365.1| Expansin-yoaJ [Crassostrea gigas]) HSP 1 Score: 118.627 bits (296), Expect = 5.916e-28 Identity = 64/171 (37.43%), Postives = 94/171 (54.97%), Query Frame = 0
Query: 63 AIPAEIQGIDFTVALDQPQF-DVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKM--GGEWREGWPVHGSYFEFRD---GAPFTFPMEVEITSVFGEVLTDWIESL 227
++P + I+ VAL+ PQF CGMC ++GTG GAG +P+ G +TAFV +LCPEC G LD A GDG W+IE +AI C V + KI + F GSN++YLK+ + +R P + + W ++ F P FP+ V +T+ G+ + D + L
Sbjct: 50 SMPPVARHINKLVALNAPQFFGSLSCGMCFRVHGTGQGAGNDPITGTFTAFVKDLCPECHAGALDLAENGDGRWKIEIQAIQCPVGNGKIEYKFQGSNNWYLKLQIRNARIPATGVEMYQPKSNRWSALHHTTDGFWVFGSDPVDKPVVFPIRVRLTAANGQAIQDHVPRL 220
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|919008626|ref|XP_013389060.1| (PREDICTED: uncharacterized protein LOC106157840 [Lingula anatina] >gi|919008628|ref|XP_013389061.1| PREDICTED: uncharacterized protein LOC106157840 [Lingula anatina]) HSP 1 Score: 115.546 bits (288), Expect = 1.060e-26 Identity = 71/213 (33.33%), Postives = 109/213 (51.17%), Query Frame = 0
Query: 25 AEGAGSDEWFIKPIRGRSTYYG-NYGGGG-ACGLDQPDGSAIPAEIQ--GIDFTVALDQPQFDVG-GCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGG--------EWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWI 224
A+ +E + K G TYYG +Y C L S +P ++ GID T A++ QF CG+C+ + G+G G G NP+ G Y +V +LCP C+ G +DFAL GDG W I++ A+PC D+ + + F S+ +Y+K+ +R P + L G +G+ + R P +P+ V++TSV GEVL D +
Sbjct: 21 AQQTKLNELYQKRFFGEGTYYGQSYNQAKETCQLR----SMLPGKLSDYGIDSTAAINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDN-VSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIMNPSILNRYQRPIQYPLRVQLTSVRGEVLQDTV 228
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|676439308|ref|XP_009048811.1| (hypothetical protein LOTGIDRAFT_157982 [Lottia gigantea] >gi|556112040|gb|ESP00692.1| hypothetical protein LOTGIDRAFT_157982 [Lottia gigantea]) HSP 1 Score: 115.161 bits (287), Expect = 1.644e-26 Identity = 65/190 (34.21%), Postives = 97/190 (51.05%), Query Frame = 0
Query: 40 GRSTYYGNYGGGGACGLDQPDGSAIPAEIQ-GIDFTVALDQPQF-DVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESL 227
G TYY G C P S P + I + VAL++PQF D CGMC ++ G GAG +P+ G + FV ++CPEC G LD A GDG W+I +A+ C V + I ++ GSN +Y+K+ + +R P +R G +W + ++EF G T P+ + + S G + D I +
Sbjct: 38 GDGTYYKK-TPNGTCSYTPP--SLPPTALSPHIKYLVALNKPQFHDAMTCGMCFRVHAEGKGAGLDPIEGDFNVFVKDMCPECLQGDLDLAEKGDGRWKILMQAVQCPVGNSYIEYLLQGSNVWYIKLQVRNARVPATEVRALQGEKWVKLKHTSDGFWEFSTGEKITTPISIHLRSFRGHDIYDIIPEI 224
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|919054532|ref|XP_013409227.1| (PREDICTED: uncharacterized protein LOC106172860 [Lingula anatina]) HSP 1 Score: 114.39 bits (285), Expect = 2.670e-26 Identity = 71/213 (33.33%), Postives = 109/213 (51.17%), Query Frame = 0
Query: 25 AEGAGSDEWFIKPIRGRSTYYG-NYGGGG-ACGLDQPDGSAIPAEIQ--GIDFTVALDQPQFDVG-GCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGG--------EWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWI 224
A+ +E + K G TYYG +Y C L S +P ++ GID T A++ QF CG+C+ + G+G G G NP+ G Y +V +LCP C+ G +DFAL GDG W I++ A+PC D+ + + F S+ +Y+K+ +R P + L G +G+ + R P +P+ V++TSV GEVL D +
Sbjct: 21 AQQTKLNELYQKRFFGEGTYYGQSYNQAKETCQLR----SMLPGKLSDYGIDSTAAINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGPYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDN-VSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIMNPSILNRYQRPIQYPLRVQLTSVRGEVLQDTV 228
BLAST of EWM30607.1 vs. NCBI_GenBank
Match: gi|545361008|ref|XP_005645833.1| (hypothetical protein COCSUDRAFT_67155 [Coccomyxa subellipsoidea C-169] >gi|384247803|gb|EIE21289.1| hypothetical protein COCSUDRAFT_67155 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 118.242 bits (295), Expect = 2.982e-26 Identity = 72/212 (33.96%), Postives = 108/212 (50.94%), Query Frame = 0
Query: 40 GRSTYYG---NYGGGGACGLDQPDGSAIPAE-IQGIDFTVALDQPQFDVG-GCGMCILLNGTGVGAGGNPVNGI--YTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLKMGGEW-------REGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESLQGGPSTIQYT 237
G T+YG + GAC + +A+ G T+AL++ FD GCG+CI+ G G G G PV+ + VNN+CPEC G LD + GDG W+IEW A+PC+V D K+R+ + +++ + +R P +++ K+ G+W W H E D A +FPM + ITS E + D I+S G T Q++
Sbjct: 27 GEGTFYGHQQDQDAQGACSYSENYANAMHLPWAAGAAVTLALNRDHFDDSRGCGLCIMYRGIGGGIGVTPVSTTNWFMGIVNNICPECSRGDLDQNIDGDGRWKIEWYAVPCNVGDTKMRYDLVVKTYYWIAIVISNTRIPVRSVSAKINGQWFALMRSVTNQWQYH---REVGDWA-GSFPMPIRITSTMNETVEDVIQSADGSTGTKQFS 234 The following BLAST results are available for this feature:
BLAST of EWM30607.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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