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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102088g1.2155.mrna |
| Orig protein id | gnl|cribi|Naga_102088g1.2155 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:23421..24328 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5897 ID=rna5897|Name=rna5897|organism=Nannochloropsis gaditana|type=mRNA|length=1262bp
TTCTAGCCACCACTTACTCGAAATTACCCCACGACCCGCGCGTTTTTTGT
TGTTGCATACATTTTGATACAGGTGTAACGCATTTTTCAGGGGCAAGCTA
TGGCGGTAAGCCGTACAGCGACGCCTTTATTCCTCATCTTCCTGGTCGTA
GTCTTCTCCTGCTCTTACTGCATCCACGCTTTTCATCTTCCCTTGAGACA
CAACTATCCGAATATTGGTCATGAAAAAAGAAAAGCTTGGTTTTCATCAG
TCGATTTCCAGAAAATTGGAGAACAGGACCGCTGGCGAGCCACCCGTACC
TCCTCCGCCTCCTCCTCTCAGGAGCAGGAGGAGGGGAAGAAGGCCATGGC
CCCGGACGAGGAGATCATGGAGGCCTTGATTGCGACGGAATGGGCCGACT
TGGAAGCCTTCTCCAACCAGCACTACAAATACCTCATCCATCCCCAGTTC
TACATGAAGCTCGCCGATCGGATCTACGAGCTGCCCACTCAGGAGGAGCA
GGACGAGGCTGCCGCGAAGGCCACCAAGATATGGAACCGGCTTCTGAAGA
TCCTCGAGTCAGCGGAGACGATGCGGACCACCACGGCGGAGAAGCTGGAG
AAGATGGTCGCGCAGGCTGCTGAGGACGACGGAGCCTTCCTCTTTCCCCT
CGCCCCCGACAGGGTGGAGGTAAAGCCTCCTTTCCGTCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCATTCCTCGCTCCCATTCAGTTCCCATCCCTCCTT
TATTTTGTGCCGCTATCACCTCTGTGTCACGCTTTCTTCTTTGATGCTCG
CTCCATTCTCTCAAATGTCAGGCGCCATGTTTCCCCCGGCGTCCGATGTT
GACCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCCC
TCCCTCCCTTTCTCCCTCCCTCCCTTCCTCTTTCCATTCCTCCTGTCAAA
GGCTGTCAGGGCCGAGGTCTTGAAGAACTTGGAGTGCATGGACGAGGGCG
CTTTGAGCACTCTTAACAGCTGGATGCTCAAGGTCCAGGACGACCAAGAC
AATGCGGCCATGACCGAGGTCCTGCAGAAGATCTTCCAGTTCTACGCCGG
GGGCGTACTGATGCGGGCCAAGGGCTACGAGCGAGGTGGCTCAGACGGTG
AGGGGGACAGAGGGCGCAGGAGACGCTCTCCCGGCTGGCCACGGTCTCGA
TCGGGGCTTCTCGCCGCCTTTTACTCACCCGATATCTCTGCTTCCCTTGT
TCTCGGTTCGCC back to topprotein sequence of rna5897 >rna5897-protein ID=rna5897-protein|Name=rna5897|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MEREAVVEQARFLQSLYDNETARFEAGMRKMVRMLKEEEAAHLAKEAKAR
TETQDVIREYTEALKAKDGLLEAWNKKDEEWEAAREGWREERAEGEAALL
KALEVVARLEGEVARREQENAAWARKAEEKQKRIKELQSTISSLEAAKRT
AGKEAARLLALTQEEHARAAASWQAEMASARVQARVRNLPPFLPPSLPPP
SYSP back to topmRNA from alignment at CM002467.1:23421..24328- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5897 ID=rna5897|Name=rna5897|organism=Nannochloropsis gaditana|type=mRNA|length=908bp|location=Sequence derived from alignment at CM002467.1:23421..24328- (Nannochloropsis gaditana)
ATGGAGCGCGAGGCGGTGGTGGAGCAAGCCCGCTTCCTCCAGTCCCTCTA
CGACAACGAGACCGCCCGCTTTGAGGCTGGCATGCGTAAGATGGTGCGCA
TGCTCAAGGAGGAGGAGGCGGCCCATCTCGCGAAGGTAACGCCTCCCTCG
TCCCAAAGTTCTTTCCTCCCCCACCCTGGGTCATTTTCACCGCCCTCCCT
CCCTCTTTTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTGCCCCCCT
CCCTCATCGCAGGAGGCGAAGGCCCGCACCGAGACGCAAGATGTCATCCG
CGAGTACACAGAGGCCCTAAAGGCTAAGGACGGTCTCCTTGAGGCCTGGA
ACAAGAAGGATGAGGAGTGGGAGGCCGCGCGGGAGGGATGGAGGGAGGAG
CGGGCGGAGGGGGAGGCGGCCCTTCTGAAGGCCTTGGAGGTAGTGGCGCG
GTTGGAGGGGGAAGTGGCGCGGAGGGAGCAGGAGAATGCCGCCTGGGCTC
GAAAGGCGGAGGAGGTGAGGGAGGGGGGGAACGAGGGAGGGGGGAATGGG
GGAGGAGGGGAGTGGTGTTGCGAAGGGAGGGAGAGGTGGCGGGGCGGGAG
GGGCTTGCACCAAGATCCATCCTCCCTCCCTTTCTCCTTCCCCCTTCCTC
CTTCCCTTCCTCCCTCGTCCCCCCCCCCCTTCAGAAACAAAAGCGAATCA
AAGAGCTCCAGAGCACCATCTCCTCCCTGGAGGCCGCCAAGAGAACCGCC
GGGAAGGAGGCAGCTCGCCTCTTGGCCCTCACTCAGGAGGAGCACGCCCG
CGCCGCCGCGAGCTGGCAGGCCGAGATGGCTTCCGCACGCGTCCAGGCGA
GGGTGAGAAACCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCCCTCC
TACTCGCC back to topCoding sequence (CDS) from alignment at CM002467.1:23421..24328- >rna5897 ID=rna5897|Name=rna5897|organism=Nannochloropsis gaditana|type=CDS|length=1833bp|location=Sequence derived from alignment at CM002467.1:23421..24328- (Nannochloropsis gaditana)
AAACAAAAGCGAATCAAAGAGCTCCAGAGCACCATCTCCTCCCTGGAGGC
CGCCAAGAGAACCGCCGGGAAGGAGGCAGCTCGCCTCTTGGCCCTCACTC
AGGAGGAGCACGCCCGCGCCGCCGCGAGCTGGCAGGCCGAGATGGCTTCC
GCACGCGTCCAGGCGAGGGTGAGAAACCTCCCTCCCTTCCTCCCTCCCTC
CCTCCCTCCCCCCTCCTACTCGCCGAGGCGAAGGCCCGCACCGAGACGCA
AGATGTCATCCGCGAGTACACAGAGGCCCTAAAGGCTAAGGACGGTCTCC
TTGAGGCCTGGAACAAGAAGGATGAGGAGTGGGAGGCCGCGCGGGAGGGA
TGGAGGGAGGAGCGGGCGGAGGGGGAGGCGGCCCTTCTGAAGGCCTTGGA
GGTAGTGGCGCGGTTGGAGGGGGAAGTGGCGCGGAGGGAGCAGGAGAATG
CCGCCTGGGCTCGAAAGGCGGAGGAGATGGAGCGCGAGGCGGTGGTGGAG
CAAGCCCGCTTCCTCCAGTCCCTCTACGACAACGAGACCGCCCGCTTTGA
GGCTGGCATGCGTAAGATGGTGCGCATGCTCAAGGAGGAGGAGGCGGCCC
ATCTCGCGAAGAAACAAAAGCGAATCAAAGAGCTCCAGAGCACCATCTCC
TCCCTGGAGGCCGCCAAGAGAACCGCCGGGAAGGAGGCAGCTCGCCTCTT
GGCCCTCACTCAGGAGGAGCACGCCCGCGCCGCCGCGAGCTGGCAGGCCG
AGATGGCTTCCGCACGCGTCCAGGCGAGGGTGAGAAACCTCCCTCCCTTC
CTCCCTCCCTCCCTCCCTCCCCCCTCCTACTCGCCGAGGCGAAGGCCCGC
ACCGAGACGCAAGATGTCATCCGCGAGTACACAGAGGCCCTAAAGGCTAA
GGACGGTCTCCTTGAGGCCTGGAACAAGAAGGATGAGGAGTGGGAGGCCG
CGCGGGAGGGATGGAGGGAGGAGCGGGCGGAGGGGGAGGCGGCCCTTCTG
AAGGCCTTGGAGGTAGTGGCGCGGTTGGAGGGGGAAGTGGCGCGGAGGGA
GCAGGAGAATGCCGCCTGGGCTCGAAAGGCGGAGGAGATGGAGCGCGAGG
CGGTGGTGGAGCAAGCCCGCTTCCTCCAGTCCCTCTACGACAACGAGACC
GCCCGCTTTGAGGCTGGCATGCGTAAGATGGTGCGCATGCTCAAGGAGGA
GGAGGCGGCCCATCTCGCGAAGAAACAAAAGCGAATCAAAGAGCTCCAGA
GCACCATCTCCTCCCTGGAGGCCGCCAAGAGAACCGCCGGGAAGGAGGCA
GCTCGCCTCTTGGCCCTCACTCAGGAGGAGCACGCCCGCGCCGCCGCGAG
CTGGCAGGCCGAGATGGCTTCCGCACGCGTCCAGGCGAGGGTGAGAAACC
TCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCCCCTCCTACTCGCCGAGG
CGAAGGCCCGCACCGAGACGCAAGATGTCATCCGCGAGTACACAGAGGCC
CTAAAGGCTAAGGACGGTCTCCTTGAGGCCTGGAACAAGAAGGATGAGGA
GTGGGAGGCCGCGCGGGAGGGATGGAGGGAGGAGCGGGCGGAGGGGGAGG
CGGCCCTTCTGAAGGCCTTGGAGGTAGTGGCGCGGTTGGAGGGGGAAGTG
GCGCGGAGGGAGCAGGAGAATGCCGCCTGGGCTCGAAAGGCGGAGGAGAT
GGAGCGCGAGGCGGTGGTGGAGCAAGCCCGCTTCCTCCAGTCCCTCTACG
ACAACGAGACCGCCCGCTTTGAGGCTGGCATGCGTAAGATGGTGCGCATG
CTCAAGGAGGAGGAGGCGGCCCATCTCGCGAAG back to top
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