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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100294g1.4549.mrna |
| Orig protein id | gnl|cribi|Naga_100294g1.4549 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:1021145..1024347 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5867 ID=rna5867|Name=rna5867|organism=Nannochloropsis gaditana|type=mRNA|length=1148bp
GTCCCGTCCTACGTGGCCGTCCTCCTCTCCGTGACCATGGTCCTGATCTT
TGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGGCCCAATCAACTCAAGA
TTGCCGCTCGTATGGCGTCCTTTGTGTGGTTCCTGATGCTCGTCCTCTCC
CCCATCTCCTACCCTTTGTCCTGGCTCCTGGACCGCTTCTTTGGGAGTCA
CAATCCTCGCAAGCGTTATAATCGTGCGGAGCTCTCGGCGCTCATTGAGA
TACATCAAGAGGTCAAGCGCCGCAACATCTCTATCGTCTCGAGTGGACCG
GGGCGCTCGAACAGCAACGGCACGCACGCCTCCGCCCACGCCTACATGAC
TGCGTCCTCCGCTACCAGCGCCCGAGCCGGCCTCCTCTCCCTCTCCCATC
CCACCCAGGACCTTGGCGTCGGCTCTCAGGGCGCTGGCGGGAAAAAGGGT
GGGTCGGCCCGTCCCTTGTGCCCTCCCTACCTGCCCTCCTCGCCCCTTCC
CACCCTCCTTGATCGCTTGCGCGCTGGAGTCTGTGTTCCTCTTTTGACTT
CACGCCCTTCTCGTATCGTCTTGGGGGTCCGCGCTCCACGCGTCCACGGG
CACTACTGGCCGATGTGTGGGTTGCTGCCGTCTCAGACGACTTCCCTCTA
CCCGTCCCTGCTTCCCCTCTTTCCCTCCCTTTTTAGGAGGGAATCAGCAC
CGACAGGCCCATGCAGGGAAGGACGCGCTCCTCTCGCAAGACGAGGTGGA
CATCGTGGTGGGGGTCTTGAAGATCGCCTCCAAGACTGTGCAGGACTGCC
TGGTGCCCATGGAGAAGGTCTTTTGCCTTTCGACGCAGGACGCTCTTGAC
GCCTCTATGCTGGCGATGATCATGTCCAGCGGGTTCTCTCGCATCCCTGT
ATACGAAGGCTCAGACCGCTCCTTCCTCCGCGGCTTCCTCCTGGTCAAAC
GCCTGATCGTCCTGGAGCCGGCTACCCGTCGGAGGGTCGGCTCGCTGGCC
CTCCGACTGCCCCTCATCGTCTCCCCCCTCTGCCCCCTCATCGACCTCCT
CAACACCTTCCAAGGTCACCCCCCCCGTCCCGTCGTCTGTCCATCTTTTC
TTTCTCTTTCTCTGCCACTGCTCTTTGTTCTCCCTGAGTCGCACCCTC back to topprotein sequence of rna5867 >rna5867-protein ID=rna5867-protein|Name=rna5867|organism=Nannochloropsis gaditana|type=polypeptide|length=354bp
MAADNHIHEDESNDAVTPFGAPSSSVPSSLLDLPLHHMLRTLQLQHGLRH
GDYQRYRHYLNRRLARLRKGVNATHRGGKAFESKNVHSLAYLEGDSSALK
KEHLLLVLLNAERAWAFAMHLQQDAAGNQHMPSYVRSHLLRRLRRAGVWA
ARLLGLVEDASDQVTERTSLEVQAYAGWMGAAVDVEQEEWGHALVKLRTG
YSILSQLGELGSLEEQDLFLSKADEVLQSARYCQYNLGEGSFEDLNLDVD
TNGATKNIPEALVEKLNAVKEASRAAAATGLETVDWGGRQLHVSSKEVRL
ALIKLEEARTALESWLGSMAGAKIKQGVGGGGGKSPTPLSSRHMAMLYSG
WAKR back to topmRNA from alignment at CM002466.1:1021145..1024347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5867 ID=rna5867|Name=rna5867|organism=Nannochloropsis gaditana|type=mRNA|length=3203bp|location=Sequence derived from alignment at CM002466.1:1021145..1024347+ (Nannochloropsis gaditana)
ATATTGGTCGGTTGGCATGGGAACGTATTCACAATTAAGTAAAATGACGA
ATTGTCGAATGAGAAGTGCCCACGCTGAGAGCAAACAAAAAGAAGTgtgc
gggaggcagggaacaGACAAATAAAACACCTGGGAGGGCActtggagaga
gggagcttGGCCTAGGCgagagaaggcgaagaaCGCGTTTGGTCTAAAGG
CTTCCACCTTGGCGTGAGAATTTTCGATATCAGGAAATTTGTTTCCTCAT
TGCCCGTGCATATTAAGTTTCAACGTTAAATTCATGCCCACAACTTCTGA
AGTAGCGTGCGCGCCTTTCTTTTGGTAGAGTTTTCCCCACCGTGCTCGCC
CGTCCATCCAACAGGCTTTTGAGACAGCTGTGGAGAGCTATGGCGGCAGA
CAACCACATTCACGAGGATGAGAGTAATGATGCAGTTACGCCATTTGgtg
ctccttcttcatctGTCCCTTCTAGTCTCCTGGACTTGCCGCTCCATCAC
ATGCTACGCACGCTTCAGCTCCAGCATGGCCTGCGTCATGGAGACTATCA
ACGCTACCGACATTACCTAAATCGCCGCCTTGCTCGTCTTCGGAAGGGGG
TCAACGCAACTCACAGGGGTGGCAAGGCTTTTGAATCCAAGAATGTTCAC
AGCTTGGCCTATTTGGAAGGCGATTCATCCGCTTTGAAAAAGGAGCATCT
GCTGCTTGTTCTCCTCAACGCTGAGCGTGCCTGGGCCTTTGCCATGCACC
TGCAACAAGACGCAGCAGGCAATCAACACATGCCCAGCTACGTCCGATCA
CATCTCTTACGTCGTCTTCGCCGGGCGGGTGTGTGGGCGGCGCGATTATT
AGGGTTAGTAGAGGACGCCAGCGATCAGGTCACGGAGCGCACATCTCTGG
AAGTGCAGGCATACGCAGGGTGGATGGGGGCCGCGGTCGAtgtggagcag
gaagagtGGGGCCACGCTTTAGTGAAGCTACGCACCGGATACTCTATTCT
CAGCCAGTTGGGCGAGCTGGGTTcgttggaggagcaagacTTGTTTCTAA
GCAAGGCAGACGAGGTTCTCCAGTCGGCACGCTACTGTCAGTACAATTTG
GGGGAGGGCTCTTTCGAAGACTTAAATCTAGATGTGGATACGAATGGAGC
GACAAAAAATATTCCCGAGGCACTGGTGGAGAAGCTGAATGCAGTCAAGG
AGGCTTCGCGGGCTGCGGCAGCCACGGGCTTGGAGACGGTTGATTGGGGG
GGACGGCAGCTGCATGTCTCAAGTAAGGAGGTTAGGCTCGCCTTGATCAA
GCTGGAAGAGGCTCGCACCGCTTTGGAGTCGTGGCTGGGATCGATGGCGG
GTGCCAAGATAAAGCAAggcgttgggggggggggagggaagagcccTACG
CCGCTGTCTTCGCGGCATATGGCGATGCTCTACAGCGGGTGGGCGAAGAG
GTGAGCAAACTCCAAAACATGAACTCGGGATCACGTGTCGAGGCACAGAA
GGACAATCTCCGGCTTTTGATGAGTTATCTCAAGCACGGGAAGCTCGAGA
CGATGCGAGTACGCAGCGAGGAGTTGATTCAGGCCATTCTTTGTGGGGGG
GACAGGTCAGGCAAGCGGGGCAGGCCCGAGGACCTGGTGCATATCCTGGA
GGGACTCATGCAGACAACGGCCGAAATGGAAGGTCTTCCAGGAGTAGAGG
ATCTCGAATCTGTCTTGGCGCGCACGCAGACTCTGCAGGCGCTCTATCGA
GCGCAGAGGCTCTTTTATCTGGGCGAATTTCACGCAACCAACTCGCGCGG
GAAGGGGCActtggccgccatggccttaTTTGAGCAAGCAGAAGagcttg
ggagggaggtagaagTTCTGGCgcaggagatggtggcggaTGAGGGATCG
tctgggaaagaggagttgCTTGAGCGGGCCGGAATAGTTGTAAATATGGC
GCGAGGTGGGTGGTACCGTGCTCGTACCTCGAAATTTATGGCATCCTTGC
CTCTATCGACAGATGGCGCAGCTGTTGAGGACAAAGAGACGGCCTTTGTG
GCCTCGGTTTTGATGCTTTCCGTGTCAGCGCAGGCAAATCAGACAACAGG
GTTGCCAAGTACACTCGAGAGGAATaagggcaggaaagaggcaCAGGAAT
TTCgtcgaggaaagggagagaaaggagaaaaccGGAAACAGATAAATGAA
GATGTAAGAGTTTCACAGTCGGAGCAAGCATTCCGGATGCTGTTGGACCG
CCTCGGAGAtttggaggcagggaaggagtcGAGTGACTTTAATATCTCTC
ATGTGCCGCCAGTGATAGCACCTGTGCGGGCCAAACCGCAGGTTTTCGAC
ATAGCCTTCAATTTTTTGGAGGAGCGTTTGCCGAGTTTGGCAGCAAGTGC
AGGGGTTTCCCAGACGTCAACTCGGGGAGCGGGGAGTGGTAGCAAGCGAG
ATTTTTTTGGATGGTTAAGAGGCTAATATTCGTCAAAAGAAATCAAGTGT
GATCATGTGTCAATGGCTTGATGTTTCGGGGAGAGATATCAATAGTACTG
CGTATTCAAGGTTTATGACGTATTTACCTACCCCTAGAAGAGCTAGGAAT
GAGTGATCAGTAGTTTTAACATTCATTTACTATGCTTTTGCGTTTCAAGA
CGGGAGCTAACAAGTCCATGAACGAGAAATGTGAAAAAACCTAGTGATTT
TCAAATAGAAAGCGGTGTGTGCTGTCGATGAAAGTTTTGCGCGTCCGCGA
AAAAATAAACATTCGGTAAATTAAGGATTTTACAAAAGGAATGACAATGA
ATATCAAGAATTTGTAAGATTATGCGACCATATTTTCATAAAAGTCAAAC
AAAGCATCTCTTTTGTCCTGGCTGGGGTCTGTCACACGAgtagggttagg
gttgggGTTAATTTAGGATTTACGGTCCGGGTTAGGGTTTGAGTTTGAGT
TTGGCTTCGAGAGAACCCTGTGTGGGGGCGTCAAGCTTTGTCAGCTTATC
TGGAGAGACTTGAAAATTTTGATTCTTGAAGACCAGAATATGAAGTTCAA
CTAATTACCTTGCAGCGTCTTAGAATGATATGACCGTCCAATTCTTTCTA
TTGATTTCTTTTGCCATTACGCACACTACACGTCGGTCCCCCAACAGCAT
TCCATATTTCGCATAATTTGTCTGATTTCACACATGGAAACAGCGCTTCT
CGC back to topCoding sequence (CDS) from alignment at CM002466.1:1021145..1024347+ >rna5867 ID=rna5867|Name=rna5867|organism=Nannochloropsis gaditana|type=CDS|length=1065bp|location=Sequence derived from alignment at CM002466.1:1021145..1024347+ (Nannochloropsis gaditana)
ATGGCGGCAGACAACCACATTCACGAGGATGAGAGTAATGATGCAGTTAC
GCCATTTGgtgctccttcttcatctGTCCCTTCTAGTCTCCTGGACTTGC
CGCTCCATCACATGCTACGCACGCTTCAGCTCCAGCATGGCCTGCGTCAT
GGAGACTATCAACGCTACCGACATTACCTAAATCGCCGCCTTGCTCGTCT
TCGGAAGGGGGTCAACGCAACTCACAGGGGTGGCAAGGCTTTTGAATCCA
AGAATGTTCACAGCTTGGCCTATTTGGAAGGCGATTCATCCGCTTTGAAA
AAGGAGCATCTGCTGCTTGTTCTCCTCAACGCTGAGCGTGCCTGGGCCTT
TGCCATGCACCTGCAACAAGACGCAGCAGGCAATCAACACATGCCCAGCT
ACGTCCGATCACATCTCTTACGTCGTCTTCGCCGGGCGGGTGTGTGGGCG
GCGCGATTATTAGGGTTAGTAGAGGACGCCAGCGATCAGGTCACGGAGCG
CACATCTCTGGAAGTGCAGGCATACGCAGGGTGGATGGGGGCCGCGGTCG
AtgtggagcaggaagagtGGGGCCACGCTTTAGTGAAGCTACGCACCGGA
TACTCTATTCTCAGCCAGTTGGGCGAGCTGGGTTcgttggaggagcaaga
cTTGTTTCTAAGCAAGGCAGACGAGGTTCTCCAGTCGGCACGCTACTGTC
AGTACAATTTGGGGGAGGGCTCTTTCGAAGACTTAAATCTAGATGTGGAT
ACGAATGGAGCGACAAAAAATATTCCCGAGGCACTGGTGGAGAAGCTGAA
TGCAGTCAAGGAGGCTTCGCGGGCTGCGGCAGCCACGGGCTTGGAGACGG
TTGATTGGGGGGGACGGCAGCTGCATGTCTCAAGTAAGGAGGTTAGGCTC
GCCTTGATCAAGCTGGAAGAGGCTCGCACCGCTTTGGAGTCGTGGCTGGG
ATCGATGGCGGGTGCCAAGATAAAGCAAggcgttgggggggggggaggga
agagcccTACGCCGCTGTCTTCGCGGCATATGGCGATGCTCTACAGCGGG
TGGGCGAAGAGGTGA back to top
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