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Properties
| Property Name | Value |
|---|
| Product | cbs domain multi-pass transmembrane |
| Orig transcript id | gnl|cribi|Naga_101736g1.9853.mrna |
| Orig protein id | gnl|cribi|Naga_101736g1.9853 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:1019289..1021042 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5866 ID=rna5866|Name=rna5866|organism=Nannochloropsis gaditana|type=mRNA|length=1058bp
GTCCCGTCCTACGTGGCCGTCCTCCTCTCCGTGACCATGGTCCTGATCTT
TGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGGCCCAATCAACTCAAGA
TTGCCGCTCGTATGGCGTCCTTTGTGTGGTTCCTGATGCTCGTCCTCTCC
CCCATCTCCTACCCTTTGTCCTGGCTCCTGGACCGCTTCTTTGGGAGTCA
CAATCCTCGCAAGCGTTATAATCGTGCGGAGCTCTCGGCGCTCATTGAGA
TACATCAAGAGGTCAAGCGCCGCAACATCTCTATCGTCTCGAGTGGACCG
GGGCGCTCGAACAGCAACGGCACGCACGCCTCCGCCCACGCCTACATGAC
TGCGTCCTCCGCTACCAGCGCCCGAGCCGGCCTCCTCTCCCTCTCCCATC
CCACCCAGGACCTTGGCGTCGGCTCTCAGGGCGCTGGCGGGAAAAAGGGT
GGGTCGGCCCGTCCCTTGTGCCCTCCCTACCTGCCCTCCTCGCCCCTTCC
CACCCTCCTTGATCGCTTGCGCGCTGGAGTCTGTGTTCCTCTTTTGACTT
CACGCCCTTCTCGTATCGTCTTGGGGGTCCGCGCTCCACGCGTCCACGGG
CACTACTGGCCGATGTGTGGGTTGCTGCCGTCTCAGACGACTTCCCTCTA
CCCGTCCCTGCTTCCCCTCTTTCCCTCCCTTTTTAGGAGGGAATCAGCAC
CGACAGGCCCATGCAGGGAAGGACGCGCTCCTCTCGCAAGACGAGGTGGA
CATCGTGGTGGGGGTCTTGAAGGCGATGATCATGTCCAGCGGGTTCTCTC
GCATCCCTGTATACGAAGGCTCAGACCGCTCCTTCCTCCGCGGCTTCCTC
CTGGTCAAACGCCTGATCGTCCTGGAGCCGGCTACCCGTCGGAGGGTCGG
CTCGCTGGCCCTCCGACTGCCCCTCATCGTCTCCCCCCTCTGCCCCCTCA
TCGACCTCCTCAACACCTTCCAAGGTCACCCCCCCCGTCCCGTCGTCTGT
CCATCTTTTCTTTCTCTTTCTCTGCCACTGCTCTTTGTTCTCCCTGAGTC
GCACCCTC back to topprotein sequence of rna5866 >rna5866-protein ID=rna5866-protein|Name=rna5866|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MVLIFGEILPSALFSGPNQLKIAARMASFVWFLMLVLSPISYPLSWLLDR
FFGSHNPRKRYNRAELSALIEIHQEVKRRNISIVSSGPGRSNSNGTHASA
HAYMTASSATSARAGLLSLSHPTQDLGVGSQGAGGKKGGSARPLCPPYLP
SSPLPTLLDRLRAGVCVPLLTSRPSRIVLGVRAPRVHGHYWPMCGLLPSQ
TTSLYPSLLPLFPSLFRRESAPTGPCREGRAPLARRGGHRGGGLEDRLQD
CAGLPGAHGEGLLPFDAGRS back to topmRNA from alignment at CM002466.1:1019289..1021042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5866 ID=rna5866|Name=rna5866|organism=Nannochloropsis gaditana|type=mRNA|length=1754bp|location=Sequence derived from alignment at CM002466.1:1019289..1021042- (Nannochloropsis gaditana)
GTCCCGTCCTACGTGGCCGTCCTCCTCTCCGTGACCATGGTCCTGATCTT
TGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGGCCCAATCAACTCAAGG
TAGGTGCACGGCGGAGGTCGCCGACAGGTCGACATCTCTACCCATCCTCC
TCCTTCGTTTTCCCTCGCTCCTGCTCTCACACCACGACACACGCTCTGGC
CTCCTTCTGGCTCCAGATTGCCGCTCGTATGGCGTCCTTTGTGTGGTACG
TGGGCCTCCTCCCCGTTCCCTGTCGGCCCCCCTCACCCTGCCCTCTCCTC
AACCCTTCCCCTAGGTTCCTGATGCTCGTCCTCTCCCCCATCTCCTACCC
TTTGTCCTGGCTCCTGGACCGCTTCTTTGGGAGTCACAATCCTCGCAAGC
GTTATAATCGTGCGGAGCTCTCGGCGCTCATTGAGATACATCAAGTGAGC
CTCGTTGCCCTCCCCTCCCTCGATCTCCTCGCACCAGGGGGACTCGTCGC
GGGCCTCATACCGCCCTCCTCTCACGTCTCCCCCACAGGAGGTCAAGCGC
CGCAACATCTCTATCGTCTCGAGTGGACCGGGGCGCTCGAACAGCAACGG
CACGCACGCCTCCGCCCACGCCTACATGACTGCGTCCTCCGCTACCAGCG
CCCGAGCCGGCCTCCTCTCCCTCTCCCATCCCACCCAGGACCTTGGCGTC
GGCTCTCAGGGCGCTGGCGGGAAAAAGGGTGGGTCGGCCCGTCCCTTGTG
CCCTCCCTACCTGCCCTCCTCGCCCCTTCCCACCCTCCTTGATCGCTTGC
GCGCTGGAGTCTGTGTTCCTCTTTTGACTTCACGCCCTTCTCGTATCGTC
TTGGGGGTCCGCGCTCCACGCGTCCACGGGCACTACTGGCCGATGTGTGG
GTTGCTGCCGTCTCAGACGACTTCCCTCTACCCGTCCCTGCTTCCCCTCT
TTCCCTCCCTTTTTAGGAGGGAATCAGCACCGACAGGCCCATGCAGGGAA
GGACGCGCTCCTCTCGCAAGACGAGGTGGACATCGTGGTGGGGGTCTTGA
AGGTAAGAGAGGCGACTTAGAAGAGGAGGAAGCGAGGTCTCCCGTGGCTC
CCCTAGAGGTGGAGGGATTGTCACCCCACGCCCTCCCTTCTCCCCTTCCC
CCCCGAAGATCGCCTCCAAGACTGTGCAGGACTGCCTGGTGCCCATGGAG
AAGGTCTTTTGCCTTTCGACGCAGGACGCTCTTGACGCCTCTATGCTGGT
GGGGTGCCGGGGAGGAATGAGGGAGGGAGGCATAGGGAGGGAGGGAGGGC
TTAGGGAGGGAGGGATCAAAGGGACCTGAGACGCGAGCAAAGCTAACCAG
TCTCCCGTAATTCAAAGCTCACGTTCCTCTCCCACGCCCCCACTGCAGGC
GATGATCATGTCCAGCGGGTTCTCTCGCATCCCTGTATACGAAGGTAAGG
AGCGTCGCTTTCCCCTCCGCCTCCCTCCCTCCGTTCATCCTTCCTCGCCC
GTCCCCTCCCCCAGGCTCAGACCGCTCCTTCCTCCGCGGCTTCCTCCTGG
TCAAACGCCTGATCGTCCTGGAGCCGGCTACCCGTCGGAGGGTCGGCTCG
CTGGCCCTCCGACTGCCCCTCATCGTCTCCCCCCTCTGCCCCCTCATCGA
CCTCCTCAACACCTTCCAAGGTCACCCCCCCCGTCCCGTCGTCTGTCCAT
CTTTTCTTTCTCTTTCTCTGCCACTGCTCTTTGTTCTCCCTGAGTCGCAC
CCTC back to topCoding sequence (CDS) from alignment at CM002466.1:1019289..1021042- >rna5866 ID=rna5866|Name=rna5866|organism=Nannochloropsis gaditana|type=CDS|length=4065bp|location=Sequence derived from alignment at CM002466.1:1019289..1021042- (Nannochloropsis gaditana)
ATCGCCTCCAAGACTGTGCAGGACTGCCTGGTGCCCATGGAGAAGGTCTT
TTGCCTTTCGACGCAGGACGCTCTTGAGAGGTCAAGCGCCGCAACATCTC
TATCGTCTCGAGTGGACCGGGGCGCTCGAACAGCAACGGCACGCACGCCT
CCGCCCACGCCTACATGACTGCGTCCTCCGCTACCAGCGCCCGAGCCGGC
CTCCTCTCCCTCTCCCATCCCACCCAGGACCTTGGCGTCGGCTCTCAGGG
CGCTGGCGGGAAAAAGGGTGGGTCGGCCCGTCCCTTGTGCCCTCCCTACC
TGCCCTCCTCGCCCCTTCCCACCCTCCTTGATCGCTTGCGCGCTGGAGTC
TGTGTTCCTCTTTTGACTTCACGCCCTTCTCGTATCGTCTTGGGGGTCCG
CGCTCCACGCGTCCACGGGCACTACTGGCCGATGTGTGGGTTGCTGCCGT
CTCAGACGACTTCCCTCTACCCGTCCCTGCTTCCCCTCTTTCCCTCCCTT
TTTAGGAGGGAATCAGCACCGACAGGCCCATGCAGGGAAGGACGCGCTCC
TCTCGCAAGACGAGGTGGACATCGTGGTGGGGGTCTTGAAGGTTCCTGAT
GCTCGTCCTCTCCCCCATCTCCTACCCTTTGTCCTGGCTCCTGGACCGCT
TCTTTGGGAGTCACAATCCTCGCAAGCGTTATAATCGTGCGGAGCTCTCG
GCGCTCATTGAGATACATCAAATTGCCGCTCGTATGGCGTCCTTTGTGTG
ATGGTCCTGATCTTTGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGGCC
CAATCAACTCAAGATCGCCTCCAAGACTGTGCAGGACTGCCTGGTGCCCA
TGGAGAAGGTCTTTTGCCTTTCGACGCAGGACGCTCTTGAGAGGTCAAGC
GCCGCAACATCTCTATCGTCTCGAGTGGACCGGGGCGCTCGAACAGCAAC
GGCACGCACGCCTCCGCCCACGCCTACATGACTGCGTCCTCCGCTACCAG
CGCCCGAGCCGGCCTCCTCTCCCTCTCCCATCCCACCCAGGACCTTGGCG
TCGGCTCTCAGGGCGCTGGCGGGAAAAAGGGTGGGTCGGCCCGTCCCTTG
TGCCCTCCCTACCTGCCCTCCTCGCCCCTTCCCACCCTCCTTGATCGCTT
GCGCGCTGGAGTCTGTGTTCCTCTTTTGACTTCACGCCCTTCTCGTATCG
TCTTGGGGGTCCGCGCTCCACGCGTCCACGGGCACTACTGGCCGATGTGT
GGGTTGCTGCCGTCTCAGACGACTTCCCTCTACCCGTCCCTGCTTCCCCT
CTTTCCCTCCCTTTTTAGGAGGGAATCAGCACCGACAGGCCCATGCAGGG
AAGGACGCGCTCCTCTCGCAAGACGAGGTGGACATCGTGGTGGGGGTCTT
GAAGGTTCCTGATGCTCGTCCTCTCCCCCATCTCCTACCCTTTGTCCTGG
CTCCTGGACCGCTTCTTTGGGAGTCACAATCCTCGCAAGCGTTATAATCG
TGCGGAGCTCTCGGCGCTCATTGAGATACATCAAATTGCCGCTCGTATGG
CGTCCTTTGTGTGATGGTCCTGATCTTTGGGGAGATTTTGCCGTCTGCGC
TCTTCAGCGGGCCCAATCAACTCAAGATCGCCTCCAAGACTGTGCAGGAC
TGCCTGGTGCCCATGGAGAAGGTCTTTTGCCTTTCGACGCAGGACGCTCT
TGAGAGGTCAAGCGCCGCAACATCTCTATCGTCTCGAGTGGACCGGGGCG
CTCGAACAGCAACGGCACGCACGCCTCCGCCCACGCCTACATGACTGCGT
CCTCCGCTACCAGCGCCCGAGCCGGCCTCCTCTCCCTCTCCCATCCCACC
CAGGACCTTGGCGTCGGCTCTCAGGGCGCTGGCGGGAAAAAGGGTGGGTC
GGCCCGTCCCTTGTGCCCTCCCTACCTGCCCTCCTCGCCCCTTCCCACCC
TCCTTGATCGCTTGCGCGCTGGAGTCTGTGTTCCTCTTTTGACTTCACGC
CCTTCTCGTATCGTCTTGGGGGTCCGCGCTCCACGCGTCCACGGGCACTA
CTGGCCGATGTGTGGGTTGCTGCCGTCTCAGACGACTTCCCTCTACCCGT
CCCTGCTTCCCCTCTTTCCCTCCCTTTTTAGGAGGGAATCAGCACCGACA
GGCCCATGCAGGGAAGGACGCGCTCCTCTCGCAAGACGAGGTGGACATCG
TGGTGGGGGTCTTGAAGGTTCCTGATGCTCGTCCTCTCCCCCATCTCCTA
CCCTTTGTCCTGGCTCCTGGACCGCTTCTTTGGGAGTCACAATCCTCGCA
AGCGTTATAATCGTGCGGAGCTCTCGGCGCTCATTGAGATACATCAAATT
GCCGCTCGTATGGCGTCCTTTGTGTGATGGTCCTGATCTTTGGGGAGATT
TTGCCGTCTGCGCTCTTCAGCGGGCCCAATCAACTCAAGATCGCCTCCAA
GACTGTGCAGGACTGCCTGGTGCCCATGGAGAAGGTCTTTTGCCTTTCGA
CGCAGGACGCTCTTGAGAGGTCAAGCGCCGCAACATCTCTATCGTCTCGA
GTGGACCGGGGCGCTCGAACAGCAACGGCACGCACGCCTCCGCCCACGCC
TACATGACTGCGTCCTCCGCTACCAGCGCCCGAGCCGGCCTCCTCTCCCT
CTCCCATCCCACCCAGGACCTTGGCGTCGGCTCTCAGGGCGCTGGCGGGA
AAAAGGGTGGGTCGGCCCGTCCCTTGTGCCCTCCCTACCTGCCCTCCTCG
CCCCTTCCCACCCTCCTTGATCGCTTGCGCGCTGGAGTCTGTGTTCCTCT
TTTGACTTCACGCCCTTCTCGTATCGTCTTGGGGGTCCGCGCTCCACGCG
TCCACGGGCACTACTGGCCGATGTGTGGGTTGCTGCCGTCTCAGACGACT
TCCCTCTACCCGTCCCTGCTTCCCCTCTTTCCCTCCCTTTTTAGGAGGGA
ATCAGCACCGACAGGCCCATGCAGGGAAGGACGCGCTCCTCTCGCAAGAC
GAGGTGGACATCGTGGTGGGGGTCTTGAAGGTTCCTGATGCTCGTCCTCT
CCCCCATCTCCTACCCTTTGTCCTGGCTCCTGGACCGCTTCTTTGGGAGT
CACAATCCTCGCAAGCGTTATAATCGTGCGGAGCTCTCGGCGCTCATTGA
GATACATCAAATTGCCGCTCGTATGGCGTCCTTTGTGTGATGGTCCTGAT
CTTTGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGGCCCAATCAACTCA
AGATCGCCTCCAAGACTGTGCAGGACTGCCTGGTGCCCATGGAGAAGGTC
TTTTGCCTTTCGACGCAGGACGCTCTTGAGAGGTCAAGCGCCGCAACATC
TCTATCGTCTCGAGTGGACCGGGGCGCTCGAACAGCAACGGCACGCACGC
CTCCGCCCACGCCTACATGACTGCGTCCTCCGCTACCAGCGCCCGAGCCG
GCCTCCTCTCCCTCTCCCATCCCACCCAGGACCTTGGCGTCGGCTCTCAG
GGCGCTGGCGGGAAAAAGGGTGGGTCGGCCCGTCCCTTGTGCCCTCCCTA
CCTGCCCTCCTCGCCCCTTCCCACCCTCCTTGATCGCTTGCGCGCTGGAG
TCTGTGTTCCTCTTTTGACTTCACGCCCTTCTCGTATCGTCTTGGGGGTC
CGCGCTCCACGCGTCCACGGGCACTACTGGCCGATGTGTGGGTTGCTGCC
GTCTCAGACGACTTCCCTCTACCCGTCCCTGCTTCCCCTCTTTCCCTCCC
TTTTTAGGAGGGAATCAGCACCGACAGGCCCATGCAGGGAAGGACGCGCT
CCTCTCGCAAGACGAGGTGGACATCGTGGTGGGGGTCTTGAAGGTTCCTG
ATGCTCGTCCTCTCCCCCATCTCCTACCCTTTGTCCTGGCTCCTGGACCG
CTTCTTTGGGAGTCACAATCCTCGCAAGCGTTATAATCGTGCGGAGCTCT
CGGCGCTCATTGAGATACATCAAATTGCCGCTCGTATGGCGTCCTTTGTG
TGATGGTCCTGATCTTTGGGGAGATTTTGCCGTCTGCGCTCTTCAGCGGG
CCCAATCAACTCAAG back to top
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