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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101192g1.10715.mrna |
| Orig protein id | gnl|cribi|Naga_101192g1.10715 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:991746..993378 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5851 ID=rna5851|Name=rna5851|organism=Nannochloropsis gaditana|type=mRNA|length=1126bp
GAAGTAGGTGGGGGGGGGGAAGACACAGAGGTGCAGCGACTGCCCTTTCC
GGTCTCTTTATTTTTGCTTCTAATGCTTCCATCACAGGTGCGCAGCATTA
ATATAAAGGAAAATCTCGCGACAGACGGGCGGTCGATCGAGGAAAAACAA
GCCGCTGTCCGGGCGGAGCTTCAGGCGAAGACGGATGCGGCGGCCCGCCA
AGAGGCCATCGCCCATTTTCGCGCCATTTTGTTGGAAACGACCCAGACAG
AGACGGAGAAAATGCAGGAGTCTGTGAGCTGGGCTAAATTTGGGGAGAAC
AGTCTGAAGGACTTCAAGTGGAGCTTGATTCAGGAGGCGATTGCGGCGGC
CGAAGGCATCGATTTCAGCGAAGTCCCGTCATTTTTGCTGAGGGAAAATC
CGGTCGTGTGGACGTAACGACGGGCGGCTTTGGAGTAGGAGGGGGAGGGA
AGCGAAAGAAGAGGTGGGAACGAGAAGAGGGTCGATTGTTGTGCAAGTGG
GTAAGTGGATAGGAAAGGATGTCCGGGTAGGGATCAGCGCAGCGGGCGCA
TATTGGTTTTGCAATGAGATGAGACGAGATTAAGCAATTATGCATTGGCG
CGCAAAATTGTGAGGGTGAGACGTTCGATGAGCTTTGAGAAAAAAGTTTG
TGCCCGGAAAAATTTTGGTCGTACCAAGGAAGAGGGGCCAGTGAGGCAGT
GGATGGATGGTGCGGTTTGTTGTCGGAGTTTTGTCCAGCCAGCGTGAAGA
GACGGTGTTAGCAAGGATATCGCCGGGACGAGATAGGCTCAGATGCGGTC
TTTTCTCGAAGCGAAGGAAAAAGGATAATTTTCCGGGTATGCGTGAACGT
TAAAGGGCGGACCTGAACGTATCGAGGCGAATGGGATGGTGTGCAACGGG
GAAGACTACCTTCATTGACTCGTCGTTCTCATGCTGGAGGAGGCGTCAGC
GGGGCCTTCGGTATGAGAGCCGAGCCTCAGAAGCTGGTTTCATCTTGGGC
AGCTCTCCTCGTCCACTACACAACTTGCATCTCGAAAGTTACCAGTCTCT
AAAAACGAACCAGGTTTCCAAGACAGAAGCAAAGACGAAGCAACGAGAAA
ATGAACCAATTACTACCGAGCTCCGC back to topprotein sequence of rna5851 >rna5851-protein ID=rna5851-protein|Name=rna5851|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MAQEQNQNRHRTHSIPLAFLPLWRRASHRRANDGLRGVRSTTFFPSLSFL
LLFASSCLTAHAFLPLPCRFKFALAAVPGHRRGLLSGAMNDVTGEMASTS
AKGAVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTCRYRAGGREG
KREKREEEERERRREERGERERERERE back to topmRNA from alignment at CM002466.1:991746..993378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5851 ID=rna5851|Name=rna5851|organism=Nannochloropsis gaditana|type=mRNA|length=1633bp|location=Sequence derived from alignment at CM002466.1:991746..993378- (Nannochloropsis gaditana)
GCCTTCACGACGCTGGCTCCCTCTTCAAGCCAGTCAAAGTCAGGTGTACA
CGCAACGGATGATGCTTGACGTCCACACAATATAGTGCTGGGCGCTTCGG
TCCCTTGCCGATGGAAGTTCTTGTTGTGTTGGTTAAATTATTGGGATGAA
CCTCTTGCCCTGTAGAGGGTTGGGAGGGAGCTAGCGAGGCACCTGAAGAG
GAACTTCAACAGGGAGAACAGCAACTTAAAGCCCCTGTGTTACCATGGCC
CGGGCTTGCCCTCCACGAGACGTTCGGTAAAGTTCACAGGCACCGTAGCC
GTTTCCTATCCTCCCTCTTCATCGATGCCATTGGTTGTACATAGTGCAAC
AATGACTAGCCTCAACAGAACCAGGAGGCAAGCTTACCACTCTCCTTTCC
TTGCCAGGGCGTATTTTTTTTGCGAGAAATATAAAGCGATGCATTGATGG
CAAGCAGATGATGATGCCACTGAATGATATGAGGCATTACAAGCCACACA
TAATTATTTTGAGGGGGCTTCAGCTTGTCTCTTTACTTCCTCCTCTCTCG
CCCTCCTCTTCTACCTTGCAAATCCCCTTTAGCGCACGCTAAATCCCAAC
ACCATTCGTCGTTGAGCACAAGCCGCAGATTACCACGTCGCCTTTAGCAC
CTTCAACGCAATCCTCATCCCCCTCTGTCCTCCCCACCATCATACGCCTC
CTACTCCGGTTCTACTTCTGCTGGATCCTTTCCTTGCACTGTTTCGTCCT
TCTCCTTCCTCTGAAGCCAGCTCCCTCGACGCATCGCCATGGCGCAGGAG
CAGAACCAAAACCGTCACCGCACACATTCAATCCCTCTAGCCTTCCTTCC
GCTCTGGCGGAGAGCCTCTCACCGGCGTGCCAATGACGGTCTCCGGGGGG
TTCGTTCCACGACATTTTTTCCCTCCCTCTCCTTCCTTCTTCTCTTCGCG
TCCTCCTGCTTGACAGCACACGCCTTCCTCCCTCTTCCCTGCCGGTTTAA
GTTTGCTCTCGCGGCGGTCCCCGGCCACCGACGAGGGCTTTTGAGCGGCG
CTATGAACGATGTGACAGGCGAGATGGCAAGCACGTCGGCGAAGGTGCGA
GAGGGAGGGAGGGAGAGAGGGCGGGAGGGAGGGAAGGAGGGAGAGCGGGA
GGGAGGGAGTCGAAAGGAGGATGCTGCAGCAGGCCGGAGCTAGAGAGACA
TAGACACGCCCGGCGGACACCGAGGGAAGAGAGGCGGCGGGCATTGAAGG
AGGGGAGTCGTAGGAAGAAGGAGTAGGGCCAGAGGAAAAGAGGGGAGAAT
CCCTGTTGCGCTAGCCTTGTTGGGAGTATACATGTGGAGGGAGGACATAT
GAGACCAGGAGACGACTTCCCAACGCGCCCCTCCCTCCCCCTCTCTCTGT
GCTCAGGGAGCCGTCACCTTAGGCCCTTACAAGAACGGGGCACTCTCCTT
CACGTACCCAAAGCCGACCGTAAGCGACGCCGAGGTAGAGGCGCAGGTGA
AGACGGCGGCGAAGAAGACATGTAGGTATCGGGCAGGGGGAAGGGAGGGA
AAGAGAGAGAAGAGGGAGGAGGAAGAGAGAGAGAGGAGGAGAGAAGAGAG
AGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG back to topCoding sequence (CDS) from alignment at CM002466.1:991746..993378- >rna5851 ID=rna5851|Name=rna5851|organism=Nannochloropsis gaditana|type=CDS|length=1066bp|location=Sequence derived from alignment at CM002466.1:991746..993378- (Nannochloropsis gaditana)
GGAGCCGTCACCTTAGGCCCTTACAAGAACGGGGCACTCTCCTTCACGTA
CCCAAAGCCGACCGTAAGCGACGCCGAGGTAGAGGCGCAGGTGAAGACGG
CGGCGAAGAAGACATGTAGGTATCGGGCAGGGGGAAGGGAGGGAAAGAGA
GAGAAGAGGGAGGAGGAAGAGAGAGAGAGGAGGAGAGAAGAGAGAGGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGATGGCGCAGGAGCAGAACCAAAA
CCGTCACCGCACACATTCAATCCCTCTAGCCTTCCTTCCGCTCTGGCGGA
GAGCCTCTCACCGGCGTGCCAATGACGGTCTCCGGGGGGTTCGTTCCACG
ACATTTTTTCCCTCCCTCTCCTTCCTTCTTCTCTTCGCGTCCTCCTGCTT
GACAGCACACGCCTTCCTCCCTCTTCCCTGCCGGTTTAAGTTTGCTCTCG
CGGCGGTCCCCGGCCACCGACGAGGGCTTTTGAGCGGCGCTATGAACGAT
GTGACAGGCGAGATGGCAAGCACGTCGGCGAAGGGAGCCGTCACCTTAGG
CCCTTACAAGAACGGGGCACTCTCCTTCACGTACCCAAAGCCGACCGTAA
GCGACGCCGAGGTAGAGGCGCAGGTGAAGACGGCGGCGAAGAAGACATGT
AGGTATCGGGCAGGGGGAAGGGAGGGAAAGAGAGAGAAGAGGGAGGAGGA
AGAGAGAGAGAGGAGGAGAGAAGAGAGAGGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGATGGCGCAGGAGCAGAACCAAAACCGTCACCGCACACATT
CAATCCCTCTAGCCTTCCTTCCGCTCTGGCGGAGAGCCTCTCACCGGCGT
GCCAATGACGGTCTCCGGGGGGTTCGTTCCACGACATTTTTTCCCTCCCT
CTCCTTCCTTCTTCTCTTCGCGTCCTCCTGCTTGACAGCACACGCCTTCC
TCCCTCTTCCCTGCCGGTTTAAGTTTGCTCTCGCGGCGGTCCCCGGCCAC
CGACGAGGGCTTTTGAGCGGCGCTATGAACGATGTGACAGGCGAGATGGC
AAGCACGTCGGCGAAG back to top
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