EWM24836.1, cds5836 (CDS) Nannochloropsis gaditana

Overview
NameEWM24836.1
Unique Namecds5836
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:992285..992590 -
Alignment locationCM002466.1:991746..991972 -

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Properties
Property NameValue
Start range991746
Start range.
Protein idEWM24836.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101192g1.10715.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:992285..992590 -
CM002466.1supercontigCM002466.1:991746..991972 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM24836.1 vs. NCBI_GenBank
Match: gi|585106434|gb|EWM24836.1| (hypothetical protein Naga_101192g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 359.377 bits (921), Expect = 1.305e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 MAQEQNQNRHRTHSIPLAFLPLWRRASHRRANDGLRGVRSTTFFPSLSFLLLFASSCLTAHAFLPLPCRFKFALAAVPGHRRGLLSGAMNDVTGEMASTSAKGAVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTCRYRAGGREGKREKREEEERERRREERGERERERERE 177
            MAQEQNQNRHRTHSIPLAFLPLWRRASHRRANDGLRGVRSTTFFPSLSFLLLFASSCLTAHAFLPLPCRFKFALAAVPGHRRGLLSGAMNDVTGEMASTSAKGAVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTCRYRAGGREGKREKREEEERERRREERGERERERERE
Sbjct:    1 MAQEQNQNRHRTHSIPLAFLPLWRRASHRRANDGLRGVRSTTFFPSLSFLLLFASSCLTAHAFLPLPCRFKFALAAVPGHRRGLLSGAMNDVTGEMASTSAKGAVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTCRYRAGGREGKREKREEEERERRREERGERERERERE 177
The following BLAST results are available for this feature:
BLAST of EWM24836.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106434|gb|EWM24836.1|1.305e-125100.00hypothetical protein Naga_101192g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5851rna5851Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications