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Properties
| Property Name | Value |
|---|
| Product | Leucine carboxyl methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100322g10.5902.mrna |
| Orig protein id | gnl|cribi|Naga_100322g10.5902 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:984764..986736 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5847 ID=rna5847|Name=rna5847|organism=Nannochloropsis gaditana|type=mRNA|length=1460bp
CTCTCGTTTCATACGGCTTGCTTCGCGGTGCATCAACGGCCCGCAGATCT
GTCCCTTACATTTTCAGCATGCGGGTAGCTTATGCCTTTGATGGGAGGAA
GGAAGCAGTGGGGAGGTTGGCCTGCTCGACAATGTTCAGTACTTTCAGCG
TATACCAACTCACCAGTACGCAACCACGACATAAAGCATGAAATGATCGG
TAGTGATGACGAAGATGAGGAAGCCAGGGAACGCGCGTCATGGACGACCG
TCACGTCTCGCAAAAAAGGGAAGGGTGGCAAGGAACGGGGGAGACGACTT
TCTTATGGCAGCCAAGCGGACACGTCGTCCTTTCACCACCAGACCCACTA
TTCGAGGGACAGAGACAGGGCTTTAAGTTCACCCGAAGATATAGCAGAAG
AGGGCTCTCGCCTGCTGGTAGCTGTGGAAGCGGCGAAGTCTTGTCTCGCT
TCAACGACCTTTTTCCTTAACCTTGAGAACGCCCTCTTGACTCGCAGCAC
AAAAAAAGTCGCCGATAATGAAGAAGAAAACAACACCAGGGAGATCCGTT
CCTTGGTCTGCTACGGTCTTGGTAGCATTCAGAGCACGAACAGTCATGCA
TTGTGGCAGCTGGCATGCGTCTGTTTGATCAAGGATCGGCTTAATGTTCA
TCTCTCCCCGCCTAGGCCAAGCACCACTCTGCCCTCCCACCCCCCCTCGA
CCTCTTCCAGCGTCTGCCCTCTCTCTCCTTCCTCAACATCCCAAGTTCAG
TATCTTACATTGCCCTTGGTGGAGGCTGAGATGTTCGATCCAGTCTTCGA
CGATGTAGACAGCTACCTTCTCAATCGTCTTGGCTGGCGCGTTATCCCGC
ACAACGAGGAATGCAAACGGCCCGCGCGAGTCCCCACTCTCTTCTTCATG
CCATGCTGCCACCGTCGCCTGTATAGCAATCTGTTGTGGGCAAACTGGTC
GCCGGAATCGTTGAAGAACGTGGTGGTGGTGGGGAATAGTCTGAAGAGCT
ACCAAGAGCGGGCGTGGGCGCTGGAGGAGGACCTGGACCCTACCGATTGC
GTGCTTCCCCTCCTGCCCTGGGTGAGAGAGATGCCCCTCTCCTGGAGAAC
GAGGACAGGGTCGGGTGGCACGACGGGATGCTGGCCAGGGATGGGGAGGG
AGGAGGAGAAGGGAGGGCCGAAGGGAGAGGCGCGGGGGATGGACGACAGG
GTGGTCAAGACGGCTTTTGTGGATATGCGTGTGGTCGACTTTGTGAATCT
ACCTCCACCTGTGGGAGAAGCAGGCGGAAGTGAGGAAAAGGACGTGGCGA
AGAGAAGCCTTTGGCACCGGCGCCCCCCCGAGTACCGTGCCGGGACAGCC
TCCAGCAAGGGGGGAGTATGACTTCAACCATGGGGAGGGCGTGTGCCTGA
ACGAGGAGGTCGAGGGAAGGAGGTTCAACATGGGCTGAAAGTACTCTTTA
TCACCTGGAA back to topprotein sequence of rna5847 >rna5847-protein ID=rna5847-protein|Name=rna5847|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MNKNTGSTTIAPAISRTADTAALCKWSMARHGYLHSVAHVLPSDTIPLLA
SLAEASAGPSGYSSFRASPLLHWCYATRASAVLRAVQTFLEDKEGDANRR
LDKGGRLRERLVVVLGGGMDGLVLALCARAAEATGVGVKVVELDAPEVVA
RKEGVLGAWREGGREGAVREFLRQTGSYRLEAVDLREGGRVGEVVGEVVR
EGGGAGREGEAPPDGDGSKGGGQGEVEPQVLFILEAVLGYMRLQEVKILL
STLPMVAPSSSLLIIDTGRTSALKNDDAVAAAVDAAFEARGCSLTGLAGW
KDRLEGRREGGRGGGRREGGREGGREQEGRRSDE back to topmRNA from alignment at CM002466.1:984764..986736+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5847 ID=rna5847|Name=rna5847|organism=Nannochloropsis gaditana|type=mRNA|length=1973bp|location=Sequence derived from alignment at CM002466.1:984764..986736+ (Nannochloropsis gaditana)
TAGCAGAGATATAGACTTGACTCTCGGCGAGTACCTCTCATCGCTTAGCC
TCTCCGTCCACGAGTACTTAATTACACGGGCCCAAGCTCATGCTCCGCCC
CGAGTGCAGCAACGCAAGGAGTCGAAAGGCACACTTTTCTCTGGATATTT
GGCCCCCAATGCCGTTATTTGGTGTGCAGTAGCTGAGGTCTCTAACACTC
TCACACAACGATGGTGCTTTCACAATTTAGAAGGGACAAACAACCGATTT
TTAACTCTGATGCAACGTACGCGCCGGAGCTGACCAGTCATGCCTTCCAA
ATTATCAAATTCTCTTGGATGCCTGAAAATCGTGGCTTTCACAGGGATCA
ATGCAGATCAAGTGGGTGCGTGCACTCTAGTCGAAAGTCCTCGTGTCAAG
TGAGCTGCTCCATGACAAACCCCAACTTCTTAGACTTGAGACCTCCATCG
ACATTGATCAAGTGAATTGTGACAGATTTTGTTGTGTTTAGAAAAAGATG
ATCAAAAAGATGACCGCCGAAACACAAGGTACTCAGCTGAGAATTTGATA
CAAATTAAATTGATACGAGGAAAGTGAGGGGCTCTTTCACTTACACATGA
ATAAAAATACTGGCTCCACCACCATTGCTCCTGCCATTTCTCGCACAGCG
GACACAGCTGCGCTATGTAAATGGTAAGTGAGATCCATTTAAGCGTTTTC
GAAACTTGAAGAGTTTTTAAAACGTGAATTAGCCACGATTCACGCGCTCG
GACAATTTCCCACCGCAACCCGCCCGCATAGGTCAATGGCCCGCCATGGC
TACTTGCACTCAGTCGCCCACGTCCTTCCGTCCGATACAATCCCGCTCCT
GGCTTCCCTGGCAGAGGCCAGCGCTGGTCCCTCGGGGTActcctcctttc
gcgccaGCCCTTTGCTTCATTGGTGCTACGCCACCCGCGCCTCGGCTGTG
CTCAGGGCGGTTCAGACTTTcttggaggacaaggagggcgacgcgAACAG
GCGGTTGGACAAGGGTGGGAGGCTTCGGGAgcgcctggtggtggtgttgg
gaggagggatggacggGTTGGTCTTGGCCCTGTGCGCGAGAGCTGCCGAA
GcgacgggggtgggggtgaaggtggtggagttGGATGCACCTGAGGTGGT
GGCGCGCAAGGAAGGGGTTctgggggcgtggagggagggggggagggagg
gcgcggtcAGGGAGTTTTTGCGTCAGACGGGCAGCTACCGCCTGGAAGCG
GTGGATttgcgggaggggggccgcgTGGGCGAGGTCGTGGGGGAGgtcgt
gagggagggagggggggcggggagggaaggagaggcaccACCCGACGGAG
ATggaagcaagggaggagggcaaggcgaggTAGAGCCTCAAGTCTTGTTC
ATCCTGGAGGCGGTGCTGGGCTACATGAGGTTGCAAGAGGTCAAGATCTT
GTTAAGGTATGTGCATCCCCTGCGCTCGCCCCCTCTTTTCGCTTTTCCAC
CcgtgcttcccttcccagcTCCTTGCCTACCCGGACATTGCGCCAGGGGG
ACGTCAGCCTCCTCTCAGTCCACAAGATTGCCTCCCTTCTATCTTCTTTC
CCGTCAAAGTTCCCATCTTTCGtacccctgccttctcccccgtcctccta
tCCATGACATCATTtcaatttttcttcttccccgtcccggCTCATCTCTC
CTCGGCCTTTTTCTCCGCTTCAGTACCCTCCCCATGGtggcgccctcctc
ttccctcctcatcatcgaCACGGGCAGGACCTCCGCCCTTAAGAACGACG
ACGCCGTCGCTGCTGCCGTTGATGCTGCTTTTGAGGCGAGAGGGTGCTCC
CTGACCGGGCTGGCGGGATGGAAAGACAGgttggaagggcggagggaggg
ggggaggggcgggggaaggagggagggagggagggagggagggagggagc
aagaaggaCGAAGGTCTGACGAA back to topCoding sequence (CDS) from alignment at CM002466.1:984764..986736+ >rna5847 ID=rna5847|Name=rna5847|organism=Nannochloropsis gaditana|type=CDS|length=3006bp|location=Sequence derived from alignment at CM002466.1:984764..986736+ (Nannochloropsis gaditana)
ATGAATAAAAATACTGGCTCCACCACCATTGCTCCTGCCATTTCTCGCAC
AGCGGACACAGCTGCGCTATGTAAATGGTCAATGGCCCGCCATGGCTACT
TGCACTCAGTCGCCCACGTCCTTCCGTCCGATACAATCCCGCTCCTGGCT
TCCCTGGCAGAGGCCAGCGCTGGTCCCTCGGGGTActcctcctttcgcgc
caGCCCTTTGCTTCATTGGTGCTACGCCACCCGCGCCTCGGCTGTGCTCA
GGGCGGTTCAGACTTTcttggaggacaaggagggcgacgcgAACAGGCGG
TTGGACAAGGGTGGGAGGCTTCGGGAgcgcctggtggtggtgttgggagg
agggatggacggGTTGGTCTTGGCCCTGTGCGCGAGAGCTGCCGAAGcga
cgggggtgggggtgaaggtggtggagttGGATGCACCTGAGGTGGTGGCG
CGCAAGGAAGGGGTTctgggggcgtggagggagggggggagggagggcgc
ggtcAGGGAGTTTTTGCGTCAGACGGGCAGCTACCGCCTGGAAGCGGTGG
ATttgcgggaggggggccgcgTGGGCGAGGTCGTGGGGGAGgtcgtgagg
gagggagggggggcggggagggaaggagaggcaccACCCGACGGAGATgg
aagcaagggaggagggcaaggcgaggTAGAGCCTCAAGTCTTGTTCATCC
TGGAGGCGGTGCTGGGCTACATGAGGTTGCAAGAGGTCAAGATCTTGTTA
AGTACCCTCCCCATGGtggcgccctcctcttccctcctcatcatcgaCAC
GGGCAGGACCTCCGCCCTTAAGAACGACGACGCCGTCGCTGCTGCCGTTG
ATGCTGCTTTTGAGGCGAGAGGGTGCTCCCTGACCGGGCTGGCGGGATGG
AAAGACAGgttggaagggcggagggagggggggaggggcgggggaaggag
ggagggagggagggagggagggagggagcaagaaggaCGAAGGTCTGACG
AAATGAATAAAAATACTGGCTCCACCACCATTGCTCCTGCCATTTCTCGC
ACAGCGGACACAGCTGCGCTATGTAAATGGTCAATGGCCCGCCATGGCTA
CTTGCACTCAGTCGCCCACGTCCTTCCGTCCGATACAATCCCGCTCCTGG
CTTCCCTGGCAGAGGCCAGCGCTGGTCCCTCGGGGTActcctcctttcgc
gccaGCCCTTTGCTTCATTGGTGCTACGCCACCCGCGCCTCGGCTGTGCT
CAGGGCGGTTCAGACTTTcttggaggacaaggagggcgacgcgAACAGGC
GGTTGGACAAGGGTGGGAGGCTTCGGGAgcgcctggtggtggtgttggga
ggagggatggacggGTTGGTCTTGGCCCTGTGCGCGAGAGCTGCCGAAGc
gacgggggtgggggtgaaggtggtggagttGGATGCACCTGAGGTGGTGG
CGCGCAAGGAAGGGGTTctgggggcgtggagggagggggggagggagggc
gcggtcAGGGAGTTTTTGCGTCAGACGGGCAGCTACCGCCTGGAAGCGGT
GGATttgcgggaggggggccgcgTGGGCGAGGTCGTGGGGGAGgtcgtga
gggagggagggggggcggggagggaaggagaggcaccACCCGACGGAGAT
ggaagcaagggaggagggcaaggcgaggTAGAGCCTCAAGTCTTGTTCAT
CCTGGAGGCGGTGCTGGGCTACATGAGGTTGCAAGAGGTCAAGATCTTGT
TAAGTACCCTCCCCATGGtggcgccctcctcttccctcctcatcatcgaC
ACGGGCAGGACCTCCGCCCTTAAGAACGACGACGCCGTCGCTGCTGCCGT
TGATGCTGCTTTTGAGGCGAGAGGGTGCTCCCTGACCGGGCTGGCGGGAT
GGAAAGACAGgttggaagggcggagggagggggggaggggcgggggaagg
agggagggagggagggagggagggagggagcaagaaggaCGAAGGTCTGA
CGAAATGAATAAAAATACTGGCTCCACCACCATTGCTCCTGCCATTTCTC
GCACAGCGGACACAGCTGCGCTATGTAAATGGTCAATGGCCCGCCATGGC
TACTTGCACTCAGTCGCCCACGTCCTTCCGTCCGATACAATCCCGCTCCT
GGCTTCCCTGGCAGAGGCCAGCGCTGGTCCCTCGGGGTActcctcctttc
gcgccaGCCCTTTGCTTCATTGGTGCTACGCCACCCGCGCCTCGGCTGTG
CTCAGGGCGGTTCAGACTTTcttggaggacaaggagggcgacgcgAACAG
GCGGTTGGACAAGGGTGGGAGGCTTCGGGAgcgcctggtggtggtgttgg
gaggagggatggacggGTTGGTCTTGGCCCTGTGCGCGAGAGCTGCCGAA
GcgacgggggtgggggtgaaggtggtggagttGGATGCACCTGAGGTGGT
GGCGCGCAAGGAAGGGGTTctgggggcgtggagggagggggggagggagg
gcgcggtcAGGGAGTTTTTGCGTCAGACGGGCAGCTACCGCCTGGAAGCG
GTGGATttgcgggaggggggccgcgTGGGCGAGGTCGTGGGGGAGgtcgt
gagggagggagggggggcggggagggaaggagaggcaccACCCGACGGAG
ATggaagcaagggaggagggcaaggcgaggTAGAGCCTCAAGTCTTGTTC
ATCCTGGAGGCGGTGCTGGGCTACATGAGGTTGCAAGAGGTCAAGATCTT
GTTAAGTACCCTCCCCATGGtggcgccctcctcttccctcctcatcatcg
aCACGGGCAGGACCTCCGCCCTTAAGAACGACGACGCCGTCGCTGCTGCC
GTTGATGCTGCTTTTGAGGCGAGAGGGTGCTCCCTGACCGGGCTGGCGGG
ATGGAAAGACAGgttggaagggcggagggagggggggaggggcgggggaa
ggagggagggagggagggagggagggagggagcaagaaggaCGAAGGTCT
GACGAA back to top
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