EWM24841.1, cds5832 (CDS) Nannochloropsis gaditana

Overview
NameEWM24841.1
Unique Namecds5832
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:985360..985436 +
Alignment locationCM002466.1:985545..986219 +
Alignment locationCM002466.1:986487..986736 +

Link to JBrowse

Properties
Property NameValue
End range.
End range986736
Protein idEWM24841.1
ProductLeucine carboxyl methyltransferase
Partialtrue
Orig transcript idgnl|cribi|Naga_100322g10.5902.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:985360..985436 +
CM002466.1supercontigCM002466.1:985545..986219 +
CM002466.1supercontigCM002466.1:986487..986736 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0032259methylation
Vocabulary: INTERPRO
TermDefinition
IPR007213LCM_MeTrfase
IPR029063SAM-dependent_MTases
Homology
[Close]
BLAST of EWM24841.1 vs. NCBI_GenBank
Match: gi|585106441|gb|EWM24841.1| (Leucine carboxyl methyltransferase, partial [Nannochloropsis gaditana])

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 
Query:    1 MNKNTGSTTIAPAISRTADTAALCKWSMARHGYLHSVAHVLPSDTIPLLASLAEASAGPSGYSSFRASPLLHWCYATRASAVLRAVQTFLEDKEGDANRRLDKGGRLRERLVVVLGGGMDGLVLALCARAAEATGVGVKVVELDAPEVVARKEGVLGAWREGGREGAVREFLRQTGSYRLEAVDLREGGRVGEVVGEVVREGGGAGREGEAPPDGDGSKGGGQGEVEPQVLFILEAVLGYMRLQEVKILLSTLPMVAPSSSLLIIDTGRTSALKNDDAVAAAVDAAFEARGCSLTGLAGWKDRLEGRREGGRGGGRREGGREGGREQEGRRSDE 334
            MNKNTGSTTIAPAISRTADTAALCKWSMARHGYLHSVAHVLPSDTIPLLASLAEASAGPSGYSSFRASPLLHWCYATRASAVLRAVQTFLEDKEGDANRRLDKGGRLRERLVVVLGGGMDGLVLALCARAAEATGVGVKVVELDAPEVVARKEGVLGAWREGGREGAVREFLRQTGSYRLEAVDLREGGRVGEVVGEVVREGGGAGREGEAPPDGDGSKGGGQGEVEPQVLFILEAVLGYMRLQEVKILLSTLPMVAPSSSLLIIDTGRTSALKNDDAVAAAVDAAFEARGCSLTGLAGWKDRLEGRREGGRGGGRREGGREGGREQEGRRSDE
Sbjct:    1 MNKNTGSTTIAPAISRTADTAALCKWSMARHGYLHSVAHVLPSDTIPLLASLAEASAGPSGYSSFRASPLLHWCYATRASAVLRAVQTFLEDKEGDANRRLDKGGRLRERLVVVLGGGMDGLVLALCARAAEATGVGVKVVELDAPEVVARKEGVLGAWREGGREGAVREFLRQTGSYRLEAVDLREGGRVGEVVGEVVREGGGAGREGEAPPDGDGSKGGGQGEVEPQVLFILEAVLGYMRLQEVKILLSTLPMVAPSSSLLIIDTGRTSALKNDDAVAAAVDAAFEARGCSLTGLAGWKDRLEGRREGGRGGGRREGGREGGREQEGRRSDE 334
The following BLAST results are available for this feature:
BLAST of EWM24841.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106441|gb|EWM24841.1|0.000e+0100.00Leucine carboxyl methyltransferase, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5847rna5847Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications