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Properties
| Property Name | Value |
|---|
| Product | CD36 antigen |
| Orig transcript id | gnl|cribi|Naga_100322g8.5904.mrna |
| Orig protein id | gnl|cribi|Naga_100322g8.5904 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:980279..983098 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5845 ID=rna5845|Name=rna5845|organism=Nannochloropsis gaditana|type=mRNA|length=1326bp
GTGCCGACCTATCGACTGAGACCGACATGGCATCGGGACATTCAGAAGCA
GACGAGGCATGGCAAAAGCCAGAAGAATCACGACGACAGCAAGACGAAAT
CCTTGCTCGAGCACTGACACTCCCTCCGGACGATGACAGCCAAATGGGAG
CTGACGATATGTCGAGCGGAATAAGGGGTCACAGAGAAGACTCTATTGCC
AGCGACACATCCAGCTTAGACCCAAGCGACAGCGCGCGAGGCTATAGACA
TGCTTCGAGCAGTGATATTGAAGCTGCTATGAGTGAGAGACCCTCTACCA
TGTCCTATTCTTCCTCCATGACGTCATCGGCAGCGTACCCTCCGACCCCA
ATCTCCTATCCGGCTGCTGCCATGGCTGGAACTGCTCCGCTGCGGGACAG
GTCTGAATCGCGTCTCTCAGCCACTACGACCCCTCCCCCTTCTCGAAGGG
TCACGGTGTCGCGGTGGACCCGAAACATTGGCTTGCTGTTATTGGCGATC
GGGTTGGTGGCGCTCGGTTCTGCGATCGTCAGCCACACCTACCTCCCTGA
ATGGCGCGACAAGAGGGCTTTAGAATCATTAGTGGTCGATTCACCAGATC
ACCCCAACTATGCAGCATGGGTCAATCATGCTTCCCCCTCTTCAGCTGGC
CGAGGAGAAGGTGATTCGCCTACCTACCAGCGCTTCTATTTTTTCCATCT
TGTGAATTCCAAAGGGTTTCTGCAGGGGAAGAAACCTTTCTATCTGGAGA
AAGGGCCCTACACGTTTCGGCAGACTAAGAAAAAAGTGGACGTCAATTTT
TCGGAGAAAGGGACGTTGGTGTCGTACGTGACACTCGTTCAAAACAAGTA
CAGCCCGGAACAATCTGGGAAGGACGTGGCCCTCTCGGACACCGTGACCA
TGCTGAATCTCGCCTACGCGACCGCCGTCGCTACGTTCGGGAGCGAGTCG
AATCTCCTCCGTTACGGATCCCGGCGGGCCCTGATGGAAATTGAACGTGC
ATGGGAGTCGACTTTCCTCCCGACTCTGAAAGAACGGGCAGTGGCAGCCA
CCGCCGTCAAGACCTTGGCCTTGATCGACGAAGCGCTGACCAAATTGAAC
TATCAGGAAGACGGGACGGCGATTCGATGGGGAGGGGGATGCGCAAGCGC
GGGCATGGTGCAACAATGTGGCTTCGAAAAGGCGGCCTTCTTAAAGGCAA
TGATTGGGAAAGAGCGCAAGGAGGACGCAGAGCTGTATCATATGTGCCTT
GACACAGGGCTGGGGTCGGAGCCGGGCCAGGTAGGGCGAGCGATGATTTA
AAGGGGGGGCACGTCGGGGATACAGC back to topprotein sequence of rna5845 >rna5845-protein ID=rna5845-protein|Name=rna5845|organism=Nannochloropsis gaditana|type=polypeptide|length=601bp
MCAYSSLLQPFLAPRSLTWRQWAVGDVLQTFSGAALPESVLPETPPELSF
YMAAVGKPVWTPVGIVVGENEVPPPISPARWSLKQTKCMRDLILRETDAD
FFAETVLGLPPSPTQTSRKTFLDVESAMARSPEASKAALEQCLVSQGAWS
VMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSS
LPPNDPRIWFGIMTEDEKMEAPGKCVQVSDIENMYSACSPVTAPTDPTTL
LYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAG
QGSVVQYGYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNA
TTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHR
FGLSPLNFSPRRRDAALYSMDGPRAREGLLNMTDIKGAPFFLSPPHYLGC
PKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSST
MGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFV
TKVQRLTLLVGILTAGVGLFLALLGFFCLCRKSGRGSKTESDARRARGHF
I back to topmRNA from alignment at CM002466.1:980279..983098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5845 ID=rna5845|Name=rna5845|organism=Nannochloropsis gaditana|type=mRNA|length=2820bp|location=Sequence derived from alignment at CM002466.1:980279..983098+ (Nannochloropsis gaditana)
CTCTTCTTAACATGCTACTCGGGTTcgttcctctctctcccgcgTCACCC
GTCCCCTACCCTCAGGCTATTCCCCTGGAAACCGTCAAGGCGCTCTGGGA
CACCTCCGACAGACTTTCCATTTTCAATGTGGAGACGGTCAACAGTACCG
TGCGCTTTGGGATCTCTTACTGGCTGAACGCAGATGCCAATATGCGAGAC
ACTCTCTTAGCGCGATTCCGGTAAGGTATTGGAGGcccaaaaagaaagag
ggaggggacaagagCATGAagacgagaagaaaaataCTGGGCATGAACGA
AATAAGATCTAGTGAAGGGATGGGTTGGGGATCAAATTTGAGAGACTCAC
AGTAAcaaaggaaggaagctgCCCGCGGTCAATGCACCCGACGCCATTTT
CCTCACAGCCGCGAcctttcctcgtcccaaTCCACAGCCTTAACACATAC
CAATACACGATGCTGACGACGTACCTGCGCAGGATTTATGACTCGCCACT
GCTGGAGACGTTCATCATCAAAAATTTCCTCAGCGGGCTGCCCCCTGGAG
AAGTTGGCCTGGCTACTGCCGAGATAGCGGACTGGtccaggtagggaggg
aggagaggtggacAGGCTTTGTTTTAGACAGCTGGAACGTTCTCCCTGAA
GGGTCTATTCAACAATTAGTTGGAGTCATTGCGGGGAGTGAGACTGTCAG
GATTATACCCGGATGTGCGCATACTCATCCCTTCTTCAACCGTTTCTCGC
ACCCCGCAGCCTGACGTGGCGACAATGGGCCGTTGGCGACGTCCTCCAGA
CTTTCAGTGGGGCGGCACTGCCTGAATCGGTCCTCCCGGAGACACCCCCT
GAGCTGTCCTTCTACATGGCTGCCGTCGGAAAGCCCGTGTGGACCCCGGT
CGGCATTGTCGTCGGTGAGAACGAggtccctccgcccatcAGCCCCGCGC
GGTGGTCCCTGAAGCAAACGAAATGCATGCGGGACCTGATCTTGCGCGAG
ACAGACGCGGACTTCTTCGCGGAAACCGTCCTgggcttgcctccctcgcc
cactcAGACCTCTCGCAAGACCTTCCTGGACGTCGAGTCCGCCATGGCCC
GGTCCCCCGAGGCGAGCAAGGCGGCGCTGGAGCAATGCCTGGTGTCTCAG
GGCGCCTGGTCGGTCATGCTGGGGTACTTTGACTACCTGGGCCGCACTTT
CGCAGGGCCTCACCTTCGCGAGCACGTCGTCGAGGCTAACGGAGGTCTGA
TCGTCACTCGCTCTGTGCAGTCCTGGCTGGAAGGGCGGCCAGAGCCCATC
CTCAGCTCATCCTTGCCGCCAAACGACCCCCGAATCTGGTTTGGGATCat
gacggaggacgagaagatggaggccCCTGGGAAGTGTGTGCAGGTCTCGG
ACATTGAAAACATGTACTCAGCTTGCAGCCCGGTCACCGCCCCCACCGAC
CCCACCACCCTGCTGTACTACAAGAAAGTGGCCAACACGTACCACACCGG
CAAGAAACACCCGGACCGTCTGGGAGCGATGGCGAAATACAAGGGCGACG
ATGTCGCCTGGGGTATCTGGCCTCGGGGGAAAATTCCCATCCTGGGCGGG
GCGGAAGCAGGGCAAGGAAGCGTTGTGCAGTACGGCTACTCCGAGGGGGA
GCAGTTCCCGCCCTTGAACCGCATTTTGCGCGCGACGGAGGCCTACGTGG
GTCCTGGCCTGGTGGCGGGGCTGGAGAAGACCTTCAACAGCCTCGCAGCG
ACCGGGAACGCCACCACAACcacggccttggccgccatgaCGGAGGAAAC
GGTCGAGTCGCCCACAGACATGCTGGTGTTCATGTCGAACTTTGTCCTCC
CCGTGCGGTTCCAATACCGTGGTCCCAGGGCACCGATCCAGGGGCTTACT
GGCCTGCACCGCTttggcctctcccccttAAACTTCTCCCCTCGGCGACG
CGACGCAGCCCTTTATTCCATGGACGGACCCCGGGCACGCGAAGGTTTGT
TGAACATGACGGATATCAAAGGGGCGCCGTTTTTCCTGAGCCCTCCCCAC
TACTTGGGCTGTCCGAAGCTGCAGTCCTTGGAATGCCTGAGCGCGGTCGC
AACCATCCCCCAGGGGGAGTCAGAGGCCGCGGTCGGAAGCCACTTGGACA
TCGAACCGTACACGGGCAGgaccctctctgcctccgtgAGCCTAcaggtc
tcctcctccaccatgggGGCTGCCCGCGTCTACGACGTTTTCCACGCAGA
GACATACACGGCCGAGGTGGTGCCCTTGCTCTGGATGACGCACCAGGCGG
AGGTCGGGCCTGAGGACGCGGCGCTCTTCCAAGAGCTCGTGAATGCGCCC
TTGGACTTTGTGACCAAAGTGCAGAGGCTGACCCTGCTCGTGGGGATCCT
AACGGCAGGCGTCGGGCTCTTCCTCGCGTTGCTCGGCTTCTTTTGTTTGT
GTAGGAagagtggaagggggagcaagACAGAGAGCGACGCGCGTCGGGCG
AGGGGGCACTTCATTTGAGAATTTGGGGTGCAGGAAGGTgaatgaggatg
gagggtgggaagTGTGGCGACGGCGGTAAGACCTCACTCCCCCCTGCGAT
GGGAGGGAGTAGCCTGACGCGCTTTTGAAGTGAGAGGCCAACCTTttgaa
tgagggaggggggcgttCGGAACGCCCTGTATGTCGCCGCAGGGAAtgta
aagaaaaaaagggaggcgtGTATGTGATCCATGTTTACGAGTCAAGGAGA
GAATGGGGAGATGTTGTGGAAGTGGAGCCGACAATTGATGAAAGAATGAA
TCGAAAGCATATCGGAAGGA back to topCoding sequence (CDS) from alignment at CM002466.1:980279..983098+ >rna5845 ID=rna5845|Name=rna5845|organism=Nannochloropsis gaditana|type=CDS|length=1806bp|location=Sequence derived from alignment at CM002466.1:980279..983098+ (Nannochloropsis gaditana)
ATGTGCGCATACTCATCCCTTCTTCAACCGTTTCTCGCACCCCGCAGCCT
GACGTGGCGACAATGGGCCGTTGGCGACGTCCTCCAGACTTTCAGTGGGG
CGGCACTGCCTGAATCGGTCCTCCCGGAGACACCCCCTGAGCTGTCCTTC
TACATGGCTGCCGTCGGAAAGCCCGTGTGGACCCCGGTCGGCATTGTCGT
CGGTGAGAACGAggtccctccgcccatcAGCCCCGCGCGGTGGTCCCTGA
AGCAAACGAAATGCATGCGGGACCTGATCTTGCGCGAGACAGACGCGGAC
TTCTTCGCGGAAACCGTCCTgggcttgcctccctcgcccactcAGACCTC
TCGCAAGACCTTCCTGGACGTCGAGTCCGCCATGGCCCGGTCCCCCGAGG
CGAGCAAGGCGGCGCTGGAGCAATGCCTGGTGTCTCAGGGCGCCTGGTCG
GTCATGCTGGGGTACTTTGACTACCTGGGCCGCACTTTCGCAGGGCCTCA
CCTTCGCGAGCACGTCGTCGAGGCTAACGGAGGTCTGATCGTCACTCGCT
CTGTGCAGTCCTGGCTGGAAGGGCGGCCAGAGCCCATCCTCAGCTCATCC
TTGCCGCCAAACGACCCCCGAATCTGGTTTGGGATCatgacggaggacga
gaagatggaggccCCTGGGAAGTGTGTGCAGGTCTCGGACATTGAAAACA
TGTACTCAGCTTGCAGCCCGGTCACCGCCCCCACCGACCCCACCACCCTG
CTGTACTACAAGAAAGTGGCCAACACGTACCACACCGGCAAGAAACACCC
GGACCGTCTGGGAGCGATGGCGAAATACAAGGGCGACGATGTCGCCTGGG
GTATCTGGCCTCGGGGGAAAATTCCCATCCTGGGCGGGGCGGAAGCAGGG
CAAGGAAGCGTTGTGCAGTACGGCTACTCCGAGGGGGAGCAGTTCCCGCC
CTTGAACCGCATTTTGCGCGCGACGGAGGCCTACGTGGGTCCTGGCCTGG
TGGCGGGGCTGGAGAAGACCTTCAACAGCCTCGCAGCGACCGGGAACGCC
ACCACAACcacggccttggccgccatgaCGGAGGAAACGGTCGAGTCGCC
CACAGACATGCTGGTGTTCATGTCGAACTTTGTCCTCCCCGTGCGGTTCC
AATACCGTGGTCCCAGGGCACCGATCCAGGGGCTTACTGGCCTGCACCGC
TttggcctctcccccttAAACTTCTCCCCTCGGCGACGCGACGCAGCCCT
TTATTCCATGGACGGACCCCGGGCACGCGAAGGTTTGTTGAACATGACGG
ATATCAAAGGGGCGCCGTTTTTCCTGAGCCCTCCCCACTACTTGGGCTGT
CCGAAGCTGCAGTCCTTGGAATGCCTGAGCGCGGTCGCAACCATCCCCCA
GGGGGAGTCAGAGGCCGCGGTCGGAAGCCACTTGGACATCGAACCGTACA
CGGGCAGgaccctctctgcctccgtgAGCCTAcaggtctcctcctccacc
atgggGGCTGCCCGCGTCTACGACGTTTTCCACGCAGAGACATACACGGC
CGAGGTGGTGCCCTTGCTCTGGATGACGCACCAGGCGGAGGTCGGGCCTG
AGGACGCGGCGCTCTTCCAAGAGCTCGTGAATGCGCCCTTGGACTTTGTG
ACCAAAGTGCAGAGGCTGACCCTGCTCGTGGGGATCCTAACGGCAGGCGT
CGGGCTCTTCCTCGCGTTGCTCGGCTTCTTTTGTTTGTGTAGGAagagtg
gaagggggagcaagACAGAGAGCGACGCGCGTCGGGCGAGGGGGCACTTC
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