EWM24843.1, cds5830 (CDS) Nannochloropsis gaditana

Overview
NameEWM24843.1
Unique Namecds5830
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:980991..982796 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24843.1
ProductCD36 antigen
Orig transcript idgnl|cribi|Naga_100322g8.5904.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:980991..982796 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0007155cell adhesion
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002159CD36
Homology
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|585106443|gb|EWM24843.1| (CD36 antigen [Nannochloropsis gaditana])

HSP 1 Score: 1233.01 bits (3189), Expect = 0.000e+0
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0
Query:    1 MCAYSSLLQPFLAPRSLTWRQWAVGDVLQTFSGAALPESVLPETPPELSFYMAAVGKPVWTPVGIVVGENEVPPPISPARWSLKQTKCMRDLILRETDADFFAETVLGLPPSPTQTSRKTFLDVESAMARSPEASKAALEQCLVSQGAWSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPRIWFGIMTEDEKMEAPGKCVQVSDIENMYSACSPVTAPTDPTTLLYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQYGYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNATTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSMDGPRAREGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCRKSGRGSKTESDARRARGHFI 601
            MCAYSSLLQPFLAPRSLTWRQWAVGDVLQTFSGAALPESVLPETPPELSFYMAAVGKPVWTPVGIVVGENEVPPPISPARWSLKQTKCMRDLILRETDADFFAETVLGLPPSPTQTSRKTFLDVESAMARSPEASKAALEQCLVSQGAWSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPRIWFGIMTEDEKMEAPGKCVQVSDIENMYSACSPVTAPTDPTTLLYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQYGYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNATTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSMDGPRAREGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCRKSGRGSKTESDARRARGHFI
Sbjct:    1 MCAYSSLLQPFLAPRSLTWRQWAVGDVLQTFSGAALPESVLPETPPELSFYMAAVGKPVWTPVGIVVGENEVPPPISPARWSLKQTKCMRDLILRETDADFFAETVLGLPPSPTQTSRKTFLDVESAMARSPEASKAALEQCLVSQGAWSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPRIWFGIMTEDEKMEAPGKCVQVSDIENMYSACSPVTAPTDPTTLLYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQYGYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNATTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSMDGPRAREGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCRKSGRGSKTESDARRARGHFI 601          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|585104049|gb|EWM23168.1| (uncharacterized protein Naga_100043g43 [Nannochloropsis gaditana])

HSP 1 Score: 258.84 bits (660), Expect = 5.078e-71
Identity = 183/559 (32.74%), Postives = 265/559 (47.41%), Query Frame = 0
Query:   19 WRQWAVGDVLQTFSGAAL--PESVLPETPPELSFYMAAVGKPVWTPVGIVVGENEVPPPISPARWSLKQTKCMRDLILRETDADFFAETVLGLP-PSPTQTSRKTFLDVESAMARSPEASKAALEQCLVSQGAWSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPR-IWFGIMTEDEKMEAPGKCVQVSDIENMYSAC----SPVTAPTDPTTLL--YYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQYGYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNATTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSMDGPRAREGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGV 567
            WRQWAVGDV+      ++  PES+ PE PPE ++Y    G   +T  G               R +  Q KC  DL  R     +F   VLGLP PS    SR TF+D     +  P         C  S+  W+++ GY  YL   F  P L+E V++ NGGL+  ++++  L G   PIL  SL  +DPR + F ++  D  ++ PG+C+  +D+EN ++AC      +T   D +  +   + KV NTYHTG+    R GA   Y+GD     IWP G IP  GG +   GS +QYGYS+G QFPP   I        GP +V                                   + VF+  FVLP+RF +      +QG+  L RF L P  FS  R DA  + MD  + +EGL N+T +     + S PHY   P       +S V  +  G   A   S++D+EP TG+T++A++ LQ+++     A  +D FH   Y  + +P+L +   A + PEDA  F+ +V          ++L  L  I++A V
Sbjct:  614 WRQWAVGDVVTRLKNESMARPESMQPELPPEFAWYAEKAGYKTFTYGG--------------KRLNRTQAKCTFDLAKRPMV--YFQTYVLGLPGPS---ISRPTFVDFGLEDSGEPLIDP---RDCFQSKNDWALLQGYLAYLAEYFVAPLLQEDVLDKNGGLVTRKTLRECLYGYSAPILQLSLAKDDPRAMKFSLLANDPSLDGPGRCLSSNDVENPFTACRFSSRNITQNMDGSEQVARIFDKVPNTYHTGRDDTVRAGAFYTYRGDRSIADIWPGGSIPFAGGTKDLPGS-IQYGYSDGMQFPPFGAI-------DGPNVV-----------------------------------LSVFVPGFVLPLRFAF-SEDVDVQGVK-LKRFRLVPETFSSSRSDAKTFGMDKVQ-QEGLFNLTGLMTGLTYFSKPHYRPTPPFD----MSDVGGLA-GFDPARDDSYIDVEPVTGKTMNANIQLQLNAGITPEA--FDKFHNSVYPVKALPVLHVAQHAGIVPEDAKFFKNMVYG-------TEKLIKLTTIISASV 1090          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|585100952|gb|EWM20970.1| (CD36 antigen [Nannochloropsis gaditana])

HSP 1 Score: 239.195 bits (609), Expect = 5.947e-69
Identity = 148/362 (40.88%), Postives = 206/362 (56.91%), Query Frame = 0
Query:  145 SQGAWSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPRIWFGIMTEDEKME-------APGKCVQVSDIENMYSACSPVTAPTDPTTLLYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQYGYSEGEQFPPLNRILRATE-AYVGPGLVAGLEKTFN-------SLAATGNATTTTAL----AAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSM--DGPRAREGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTG 485
            S+ AW VM GY D+L   F  P +   V+ +NGGL+VTRSV SWL GR EPIL+ SL  +DPR+ F  +  D  +          G C   +D+EN  +AC+PV        +  Y+K  +T+HTGK  P R+G +A + GD+  WG+WPR  I I  G+  G GS VQYG+S+G QFPPL+R+  A   A    G+ + L  T         S    G A T+T +      M +    S   + VF+S FVLP+ F+++     ++G+  L +F LSPL FSP+R DA+ +SM   G   REGL N+TD++  P FLSPP + G P L+ L CL+ +     G+ +AA GS+L +EPYTG
Sbjct:    4 SKDAWGVMQGYIDHLAVHFVKPVVETDVIRSNGGLVVTRSVHSWLTGRREPILALSLDSSDPRVLFSFLGADLSLTPEGGVEGGHGTCRMSNDVENTVTACAPVLDEAS-GEIREYRKTPSTFHTGKHFPHRIGQLAAHHGDEKIWGVWPRKTIVIQAGSREG-GSNVQYGHSDGMQFPPLHRLEEARPVASEDTGVSSVLNGTLGLKELAALSFLDAGEAETSTGMEREEVVMADPASVSEDQLSVFLSKFVLPLWFRFQ-ETVSLRGIR-LLKFNLSPLTFSPQRPDASGFSMLGLGEGGREGLFNLTDLQTMPSFLSPPQFHGYPSLRKLPCLAGLRLSEIGKRQAARGSYLAVEPYTG 361          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|585110788|gb|EWM28404.1| (cd36-like class b scavenger receptor [Nannochloropsis gaditana])

HSP 1 Score: 97.0561 bits (240), Expect = 3.288e-17
Identity = 129/534 (24.16%), Postives = 227/534 (42.51%), Query Frame = 0
Query:   87 KCMRDLILRETDADFFAETVLGLPPSPTQTSRKTFLDVESAMARSPEASKAALEQCL-----VSQGA------WSVMLGYFDYLGRTFAGPHLREHVVEANGGLIVTRSVQSWLEGRPEPILSSSLPPNDPRIWFGIMTEDEK-MEAPGK-CVQVSDIENMYSACSPVTAPTDPTTLLYYKKVANTYHTGKKHPDRLGAMAKYKGDDVAWGIWPRGKIPILGGAEAGQGSVVQY--GYSEGEQFPPLNRILRATEAYVGPGLVAGLEKTFNSLAATGNATTTTALAAMTEETVESPTDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNFSPRRRDAALYSMDGPRA--REGLLNMTDIKGAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVG-SHLDIEPYTGRTLSASVSLQVSSSTMG-AARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTA-GVGLFLALLGFFCLCRKSGRGSKTESDARRARGHF 600
            +C+ D++L  T+  +F   VLG+P    +     F  + ++M  S       +E+CL     +  G       W+ +  Y +++G++   P  R  V+  NGGL+ TR+V+    G  EP+L+ SL  + P  ++ +++  E  ++AP   C   +D+ +    C   T  + PT  + Y+K  + Y TGK     +  +  Y G          G +P++    +GQ + V      +E     PL+  LR T+    P     +  +++  A     +T         + + SP  + V      + +RF Y        G+  L RF LS   F  R   A +    G  A  +   +N+T     P F++     G    Q +   +A +     +++   G +++D+EP TG++LS     Q+S ST    +  YD+F+ E Y    +P ++M  +  +   DA+  +  +  P   V  +        IL+A  VG+ + LLG   L  K GR     S   +   HF
Sbjct:  496 ECIFDVLL--TNRTYFENAVLGIPAFLLEDD---FTHLHASM--SSPLVLGGVEECLAVGPMLGDGTRAPTPDWADLQTYLNFVGKSSIEPLFRFIVINNNGGLVSTRTVKELALGHQEPLLTLSLGADAPSAFYSLLSNTEGPLDAPHAFCTSSADVNHALYGCFLDTEASTPTKSV-YRKTPSRYATGKADISDVQQLQAYAG--------LTGDVPVM--YPSGQRTPVAMPDAVAELASSIPLSTSLRRTQTETFPP-PESINASYSPSAIQRGFSTGEQFPPFLLQDLPSPPPLWVLRLKGPIVIRFSYTN-NTKRHGIP-LRRFTLSQDLFEARDDLALIDVGAGELAVRQSTFMNVTLGTWMPTFMADSPSAG---FQFMPAFAASSPQVLEQAKGMEGTTYIDVEPMTGKSLSRRTQAQLSISTSSPGSGAYDLFYDEAYKGPFLPTVFMVTETFLDKRDASGIRAALYTPGKVVNGI--------ILSAIPVGIIMFLLGLVVLG-KEGRADGLYSIGPKLFIHF 996          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|1062953374|ref|XP_017902102.1| (PREDICTED: platelet glycoprotein 4 isoform X1 [Capra hircus] >gi|1062953376|ref|XP_017902103.1| PREDICTED: platelet glycoprotein 4 isoform X1 [Capra hircus] >gi|1062953378|ref|XP_017902104.1| PREDICTED: platelet glycoprotein 4 isoform X1 [Capra hircus] >gi|1062953381|ref|XP_017902105.1| PREDICTED: platelet glycoprotein 4 isoform X1 [Capra hircus] >gi|1062953383|ref|XP_017902106.1| PREDICTED: platelet glycoprotein 4 isoform X1 [Capra hircus])

HSP 1 Score: 70.4774 bits (171), Expect = 3.410e-9
Identity = 62/223 (27.80%), Postives = 112/223 (50.22%), Query Frame = 0
Query:  368 TDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNF-SPRRR-DAALYSMDGPRARE----GLLNMTDIK-GAPFFLSPPHYL-GCPKL-QSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCR 581
            T  L F S+ +    +   G    ++G+  ++RF L  L F SP +  D   +  +   ++     G+L+++  K G P ++S PH+L G P+L + +E LS     P  E  +   ++LD+EP TG TL  +  LQ++     A R+ D      +   +VP+LW+     +G E A +F++ V   ++ +  V+ +     +L+ GV +F+A +  +C CR
Sbjct:  261 TRTLQFFSSDICRSIYAVFGAEMNLKGIP-VYRFVLPALAFASPLQNPDNHCFCTEKIISKNCTLYGVLDISKCKEGKPVYISLPHFLHGSPELAEPIEGLS-----PNEEEHS---TYLDVEPITGFTLRFAKRLQINILVKPARRI-DALKNLKHNY-IVPILWLNETGTIGDEKAEMFRKQVTGKINLLGLVEMV-----LLSVGVVMFIAFMISYCACR 467          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|550822218|ref|NP_001272507.1| (platelet glycoprotein 4 [Capra hircus] >gi|338163311|gb|AEI74425.1| CD36 [Capra hircus])

HSP 1 Score: 70.4774 bits (171), Expect = 3.563e-9
Identity = 62/223 (27.80%), Postives = 112/223 (50.22%), Query Frame = 0
Query:  368 TDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNF-SPRRR-DAALYSMDGPRARE----GLLNMTDIK-GAPFFLSPPHYL-GCPKL-QSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCR 581
            T  L F S+ +    +   G    ++G+  ++RF L  L F SP +  D   +  +   ++     G+L+++  K G P ++S PH+L G P+L + +E LS     P  E  +   ++LD+EP TG TL  +  LQ++     A R+ D      +   +VP+LW+     +G E A +F++ V   ++ +  V+ +     +L+ GV +F+A +  +C CR
Sbjct:  261 TRTLQFFSSDICRSIYAVFGAEMNLKGIP-VYRFVLPALAFASPLQNPDNHCFCTEKIISKNCTLYGVLDISKCKEGKPVYISLPHFLHGSPELAEPIEGLS-----PNEEEHS---TYLDVEPITGFTLRFAKRLQINILVKPARRI-DALKNLKHNY-IVPILWLNETGTIGDEKAEMFRKQVTGKINLLGLVEMV-----LLSVGVVMFIAFMISYCACR 467          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|699627353|ref|XP_009898321.1| (PREDICTED: platelet glycoprotein 4 [Picoides pubescens] >gi|678194314|gb|KFV61621.1| Platelet glycoprotein 4 [Picoides pubescens])

HSP 1 Score: 70.0922 bits (170), Expect = 4.625e-9
Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = 0
Query:  428 GLLNMTDIK-GAPFFLSPPHYLGCPKLQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCRKS 583
            G+L+++  K G P F+S PH+L      S   L  V  +   E E    + LDIEP TG TL  +  LQV+     A ++  +  ++   + V P+LW+   A +G E A +F++ V  P+ F+  +Q     + +L +G  LFLA +G + +CR +
Sbjct:  325 GVLDISACKAGRPVFISLPHFLHA----SESILHGVEGLNPDEKEHE--TFLDIEPTTGFTLRFAKRLQVNLLVKPAPKIEAL--SKVNESYVFPILWLNESAVIGDEKAEMFRKKVTGPVYFLNVLQ-----LSLLISGSVLFLAFMGSYFVCRST 468          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|556741991|ref|XP_005966523.1| (PREDICTED: platelet glycoprotein 4-like isoform X1 [Pantholops hodgsonii] >gi|556741993|ref|XP_005966524.1| PREDICTED: platelet glycoprotein 4-like isoform X2 [Pantholops hodgsonii])

HSP 1 Score: 69.707 bits (169), Expect = 5.580e-9
Identity = 62/223 (27.80%), Postives = 112/223 (50.22%), Query Frame = 0
Query:  368 TDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNF-SPRRR-DAALYSMDGPRARE----GLLNMTDIK-GAPFFLSPPHYL-GCPKL-QSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCR 581
            T  L F S+ +    +   G    ++G+  ++RF L  L F SP +  D   +  +   ++     G+L+++  K G P ++S PH+L G P+L + +E LS     P  E  +   ++LD+EP TG TL  +  LQ++   +  AR  D      +   +VP+LW+     +G E A +F++ V   ++ +  V+     + +L+ GV +F+A +  +C CR
Sbjct:  261 TRTLQFFSSDICRSIYAVFGAEMNLKGIP-VYRFVLPSLAFASPLQNPDNHCFCTEKIISKNCTLYGVLDISKCKEGKPVYISLPHFLHGSPELAEPIEGLS-----PNEEEHS---TYLDVEPITGFTLRFAKRLQINI-LVKPARKIDALKNLKHNY-IVPILWLNETGTIGDEKAEMFRKQVTGKINLLGLVE-----IILLSVGVVMFIAFMISYCACR 467          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|704253685|ref|XP_010148746.1| (PREDICTED: platelet glycoprotein 4, partial [Eurypyga helias])

HSP 1 Score: 67.3958 bits (163), Expect = 5.724e-9
Identity = 61/202 (30.20%), Postives = 101/202 (50.00%), Query Frame = 0
Query:  389 RAPIQGLTGLHRFGLSPLNF-SPRR-RDAALYSMDGPRARE----GLLNMTDIK-GAPFFLSPPHYLGCPK--LQSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCR 581
            +  ++G++ L+RF +    F SP   RD   +  D   ++     G+L+++  K G P F+S PH+L      L  +E LS          E   G+ LD+EP TG TL  +  LQV+     A ++  +  ++     V P+LW+   A +G   A +F++ V  P+  ++ +Q    LV I+T  V LFLA +G + +CR
Sbjct:   48 KQDVKGIS-LYRFTVPREAFASPAEVRDNYCFCTDEVISKNCTLAGVLDISACKAGRPVFISLPHFLHASDSLLHDVEGLSP--------DEKEHGTFLDVEPITGFTLQFAKRLQVNLLVKPAPKIEAL--SKVQKPYVFPILWLNESAVIGDVKAEMFRKKVTGPVQMLSVLQ----LVLIITGSV-LFLAFMGSYFICR 233          
BLAST of EWM24843.1 vs. NCBI_GenBank
Match: gi|803062394|ref|XP_012031972.1| (PREDICTED: platelet glycoprotein 4 [Ovis aries] >gi|803062396|ref|XP_012031973.1| PREDICTED: platelet glycoprotein 4 [Ovis aries] >gi|803062398|ref|XP_012031974.1| PREDICTED: platelet glycoprotein 4 [Ovis aries] >gi|803062400|ref|XP_012031975.1| PREDICTED: platelet glycoprotein 4 [Ovis aries] >gi|803062402|ref|XP_012031976.1| PREDICTED: platelet glycoprotein 4 [Ovis aries] >gi|803062404|ref|XP_012031977.1| PREDICTED: platelet glycoprotein 4 [Ovis aries])

HSP 1 Score: 69.707 bits (169), Expect = 7.013e-9
Identity = 62/223 (27.80%), Postives = 112/223 (50.22%), Query Frame = 0
Query:  368 TDMLVFMSNFVLPVRFQYRGPRAPIQGLTGLHRFGLSPLNF-SPRRR-DAALYSMDGPRARE----GLLNMTDIK-GAPFFLSPPHYL-GCPKL-QSLECLSAVATIPQGESEAAVGSHLDIEPYTGRTLSASVSLQVSSSTMGAARVYDVFHAETYTAEVVPLLWMTHQAEVGPEDAALFQELVNAPLDFVTKVQRLTLLVGILTAGVGLFLALLGFFCLCR 581
            T  L F S+ +    +   G    ++G+  ++RF L  L F SP +  D   +  +   ++     G+L+++  K G P ++S PH+L G P+L + +E LS     P  E  +   ++LD+EP TG TL  +  LQ++   +  AR  D      +   +VP+LW+     +G E A +F++ V   ++ +  V+ +     +L+ GV +F+A +  +C CR
Sbjct:  261 TRKLQFFSSDICRSIYAVFGAELNLKGIP-VYRFVLPSLAFASPLQNPDNHCFCTEKLLSKNCTLYGVLDISKCKEGKPVYISLPHFLHGSPELAEPIEGLS-----PNEEEHS---TYLDVEPITGFTLRFAKRLQINI-LVKPARKIDALKNLKHNY-IVPILWLNETGTIGDEKAEMFRKQVTGKINLLGLVEMV-----LLSVGVVMFIAFMISYCACR 467          
The following BLAST results are available for this feature:
BLAST of EWM24843.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106443|gb|EWM24843.1|0.000e+0100.00CD36 antigen [Nannochloropsis gaditana][more]
gi|585104049|gb|EWM23168.1|5.078e-7132.74uncharacterized protein Naga_100043g43 [Nannochlor... [more]
gi|585100952|gb|EWM20970.1|5.947e-6940.88CD36 antigen [Nannochloropsis gaditana][more]
gi|585110788|gb|EWM28404.1|3.288e-1724.16cd36-like class b scavenger receptor [Nannochlorop... [more]
gi|1062953374|ref|XP_017902102.1|3.410e-927.80PREDICTED: platelet glycoprotein 4 isoform X1 [Cap... [more]
gi|550822218|ref|NP_001272507.1|3.563e-927.80platelet glycoprotein 4 [Capra hircus] >gi|3381633... [more]
gi|699627353|ref|XP_009898321.1|4.625e-931.85PREDICTED: platelet glycoprotein 4 [Picoides pubes... [more]
gi|556741991|ref|XP_005966523.1|5.580e-927.80PREDICTED: platelet glycoprotein 4-like isoform X1... [more]
gi|704253685|ref|XP_010148746.1|5.724e-930.20PREDICTED: platelet glycoprotein 4, partial [Euryp... [more]
gi|803062394|ref|XP_012031972.1|7.013e-927.80PREDICTED: platelet glycoprotein 4 [Ovis aries] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5845rna5845Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications