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Properties
| Property Name | Value |
|---|
| Product | Pyridine nucleotide-disulfide oxidoreductase, NAD-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100729g2.10074.mrna |
| Orig protein id | gnl|cribi|Naga_100729g2.10074 |
| Gene | NDE1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1459948..1461174 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna584 ID=rna584|Name=rna584|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGGCGATGCGTGAAGCCGGCAAGTTGACGATGAGGAGTCGGAGGCTGCA
AGTAAGAGGGAAGGACAAGCATAGCTTACGTTGGCAGGACAGAACGAGAA
TTCTATTCTCGCCCTTCTCTCTCTCGTTACGACGTTATACTACTTTAAGC
GCCGCGGACACCACCGCGACCGCAGACATCTTTGAAGGCTTGACCAAGAA
CAAAAAAGCCTACACCGCCATATACAAACGCGATGCCCGCCCCCCCGTGG
TCATCCTTGGAAGTGGATGGGCCGGTTTCCAACTTGCCCGGGACCTGAAC
AAGGCCAAATTCGATGTGACAGTCATCAGCGACCGCAATCATTTCCTCTT
CACTCCCCTTCTGCCCTCCACGACTGTGGGAACGCTTGAGTTTCGGACCA
TACAGGAGCCCGTACGGACCATCCCCGGGATTAAATTCTATCAAGCGCGT
GCCACACGCCTGAATTTTGAGGAGAGACAAGTGGCCTGCGAGGAGTATTA
CCTAAAGGAGCGCTTCGAAGTCAACTATGAATATTTGATCCTGGCGGTGG
GGAGCACCACGAACACCTTCAACGTCCCCGGGGTCTGCCCGGACAATCAC
GTATATTTCCTCAAGCAGCTCAGCGACGCGCGGGCCATTCGGTCCCGGAT
CATCGAATGTTTTGAGCGTGCCTCTTACCCAGACTTACCGTCTGCAGCAC
AGGCCCGGCTTCTCTCCTTCCTGGTTGTGGGGGGGGGGGCCCACATCTGT
GGAGTTTGCGAGTGA back to topprotein sequence of rna584 >rna584-protein ID=rna584-protein|Name=rna584|organism=Nannochloropsis gaditana|type=polypeptide|length=233bp
MVSVTLIEASDHILGSFDRRLVDYVGRVFQERHVRVLTDTSVEKVEPNVA
WLKDGTPLHFGLCVWSTGVKATPLVQALPPSLSKGPGGRLLVDGRLRLQG
HDQKGVFAVGDCAISETRPLPCLAQVAQQQAKYLGGVLNKYSEPHVNKEV
PPFEYRHLGSMAQLGMWKGVVDSAKLDDKKGDEDGKKSVLTGWTAFLLWR
AAYWTKSVSWANKILIPMYWLKSWIFGRDISRF back to topmRNA from alignment at CM002455.1:1459948..1461174+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna584 ID=rna584|Name=rna584|organism=Nannochloropsis gaditana|type=mRNA|length=1227bp|location=Sequence derived from alignment at CM002455.1:1459948..1461174+ (Nannochloropsis gaditana)
ATGGTAAAGAAAGCGAgatggatgggggggagggtcagagagggagaaag
agagggaggggcattcGTTTCTGCAGAGGCACACGATACCTTATCACCCT
CCCGCTCGACCCCTACCTGTCTGCCCGATGACCTCGGCTCTGGCCTGCAC
CACAATCCTCGcttctttgcttttttcACAGGATTTTCTCCATCTGCGTC
CTTGAACTGTCTCTGTTTCATTCTTTCCATTGGCGaacgcccccctccct
tcccttcttccctccctccttccttcctgtggTCCTCTCCAGGTCTCTGT
CACCCTGATCGAGGCCTCAGACCACATCCTGGGCTCCTTCGATCGGCGGC
TCGTCGATTACGTCGGACGTGTCTTCCAGGAGCGTCACGTCCGCGTCTTG
ACGGACACCAGCGTCGAGAaggtgaagggggaggggggggggggggcacg
aagGGAGTGGCCTCGGCTCTCCTGACGCCGGGCAGtcaggcaggggggag
gcgacctTGTTTTCACGGAAGTCTTGCGCGTGGAAGCTTGCCTTCTGCAT
CCTCTTCGCATGGTGAACCCGTGAAGTCTACCCTATATTCCATAAAATGG
GCCGCTTGCAATCATACTTTCTCACGTTAAACTTCTTTTCTGATCGCCAT
TATGCAGGTGGAGCCCAACGTGGCATGGCTCAAAGATGGAACGCCCCTCC
ATTTCGGTCTCTGTGTGTGGAGCACGGGAGTCAAAGCCACCCCCCTTGTC
caggccctgcccccctccttgtccaaaGGCCCAGGGGGCCGTCTCCTGGT
TGACGGACGCCTCCGTCTCCAAGGCCACGATCAGAAAGGTGTTTTTGCGG
TCGGTGATTGTGCAATATCTGAAACAAGGCCCTTGCCGTGTCTGGCGCAG
GTAGCGCAGCAACAAGCCAAGTATTTGGGCGGAGTGTTGAACAAATATTC
GGAGCCGCATGTGAACAAAGAAGTGCCCCCATTCGAGTATCGGCATCTGG
GGAGCATGGCACAGTTGGGCATGTGGAAAGGGGTGGTTGATTCGGCGAAA
TTAGACGATAAAAaaggggacgaggatggCAAGAAAAGTGTGCTGACGGG
TTGGACGGCTTTCCTACTCTGGCGTGCGGCGTATTGGACGAAAAGTGTCT
CATGGGCGAACAAGATTCTTATCCCCATGTACTGGTTAAAAAGCTGGATA
TTTGGACGAGATATTTCCCGATTCTGA back to topCoding sequence (CDS) from alignment at CM002455.1:1459948..1461174+ >rna584 ID=rna584|Name=rna584|organism=Nannochloropsis gaditana|type=CDS|length=2106bp|location=Sequence derived from alignment at CM002455.1:1459948..1461174+ (Nannochloropsis gaditana)
ATGGTCTCTGTCACCCTGATCGAGGCCTCAGACCACATCCTGGGCTCCTT
CGATCGGCGGCTCGTCGATTACGTCGGACGTGTCTTCCAGGAGCGTCACG
TCCGCGTCTTGACGGACACCAGCGTCGAGAagGTGGAGCCCAACGTGGCA
TGGCTCAAAGATGGAACGCCCCTCCATTTCGGTCTCTGTGTGTGGAGCAC
GGGAGTCAAAGCCACCCCCCTTGTCcaggccctgcccccctccttgtcca
aaGGCCCAGGGGGCCGTCTCCTGGTTGACGGACGCCTCCGTCTCCAAGGC
CACGATCAGAAAGGTGTTTTTGCGGTCGGTGATTGTGCAATATCTGAAAC
AAGGCCCTTGCCGTGTCTGGCGCAGGTAGCGCAGCAACAAGCCAAGTATT
TGGGCGGAGTGTTGAACAAATATTCGGAGCCGCATGTGAACAAAGAAGTG
CCCCCATTCGAGTATCGGCATCTGGGGAGCATGGCACAGTTGGGCATGTG
GAAAGGGGTGGTTGATTCGGCGAAATTAGACGATAAAAaaggggacgagg
atggCAAGAAAAGTGTGCTGACGGGTTGGACGGCTTTCCTACTCTGGCGT
GCGGCGTATTGGACGAAAAGTGTCTCATGGGCGAACAAGATTCTTATCCC
CATGTACTGGTTAAAAAGCTGGATATTTGGACGAGATATTTCCCGATTCT
GAATGGTCTCTGTCACCCTGATCGAGGCCTCAGACCACATCCTGGGCTCC
TTCGATCGGCGGCTCGTCGATTACGTCGGACGTGTCTTCCAGGAGCGTCA
CGTCCGCGTCTTGACGGACACCAGCGTCGAGAagGTGGAGCCCAACGTGG
CATGGCTCAAAGATGGAACGCCCCTCCATTTCGGTCTCTGTGTGTGGAGC
ACGGGAGTCAAAGCCACCCCCCTTGTCcaggccctgcccccctccttgtc
caaaGGCCCAGGGGGCCGTCTCCTGGTTGACGGACGCCTCCGTCTCCAAG
GCCACGATCAGAAAGGTGTTTTTGCGGTCGGTGATTGTGCAATATCTGAA
ACAAGGCCCTTGCCGTGTCTGGCGCAGGTAGCGCAGCAACAAGCCAAGTA
TTTGGGCGGAGTGTTGAACAAATATTCGGAGCCGCATGTGAACAAAGAAG
TGCCCCCATTCGAGTATCGGCATCTGGGGAGCATGGCACAGTTGGGCATG
TGGAAAGGGGTGGTTGATTCGGCGAAATTAGACGATAAAAaaggggacga
ggatggCAAGAAAAGTGTGCTGACGGGTTGGACGGCTTTCCTACTCTGGC
GTGCGGCGTATTGGACGAAAAGTGTCTCATGGGCGAACAAGATTCTTATC
CCCATGTACTGGTTAAAAAGCTGGATATTTGGACGAGATATTTCCCGATT
CTGAATGGTCTCTGTCACCCTGATCGAGGCCTCAGACCACATCCTGGGCT
CCTTCGATCGGCGGCTCGTCGATTACGTCGGACGTGTCTTCCAGGAGCGT
CACGTCCGCGTCTTGACGGACACCAGCGTCGAGAagGTGGAGCCCAACGT
GGCATGGCTCAAAGATGGAACGCCCCTCCATTTCGGTCTCTGTGTGTGGA
GCACGGGAGTCAAAGCCACCCCCCTTGTCcaggccctgcccccctccttg
tccaaaGGCCCAGGGGGCCGTCTCCTGGTTGACGGACGCCTCCGTCTCCA
AGGCCACGATCAGAAAGGTGTTTTTGCGGTCGGTGATTGTGCAATATCTG
AAACAAGGCCCTTGCCGTGTCTGGCGCAGGTAGCGCAGCAACAAGCCAAG
TATTTGGGCGGAGTGTTGAACAAATATTCGGAGCCGCATGTGAACAAAGA
AGTGCCCCCATTCGAGTATCGGCATCTGGGGAGCATGGCACAGTTGGGCA
TGTGGAAAGGGGTGGTTGATTCGGCGAAATTAGACGATAAAAaaggggac
gaggatggCAAGAAAAGTGTGCTGACGGGTTGGACGGCTTTCCTACTCTG
GCGTGCGGCGTATTGGACGAAAAGTGTCTCATGGGCGAACAAGATTCTTA
TCCCCATGTACTGGTTAAAAAGCTGGATATTTGGACGAGATATTTCCCGA
TTCTGA back to top
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