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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100866g1.1199.mrna |
| Orig protein id | gnl|cribi|Naga_100866g1.1199 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:965366..967206 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5839 ID=rna5839|Name=rna5839|organism=Nannochloropsis gaditana|type=mRNA|length=1004bp
AGCCGCAACAAGACAAGTAGAAAAGAGACAAAGCGATGAAATGAAGGCAT
TGGTTAATGCTTGTGCATGGAGACCACCTGTAGGCCATGGGAAGTCAGTG
CGCGGGAATGTCGACACTAAGAGCTGAGATTAAAATAAAACGACAGGGTT
CAACGAGGCCGTGCGAAACGTCAGAAGGAAGCCGCACATACTCCCACACA
TCCGCTCATACGCCAACGGGAAAGTCGATGGATGTTCTCACGCAACAATG
CTGGGTCTTTTGGATATATTTTCATGACATACCACCCCATGGCTTGACTT
CCTAAAACTCCGCTATCGCCATCGCGTCGCCCCCTGCTATTGCCATTCCG
TCCGCATTTGTGCATACAAGAGGAGGAATGAGGCAGAAGAGGCATCCTTG
ATCAGTTTTTCGCAACATTCGAATAAGCAGTGGTCTGGAGATATGCCAGG
TCCTGTCCCCCCTCAAGGTGAAGACGAAAGTGAAAAGGCAATGGAGACGG
CCGCGTTGCTGACAGCTGCAGCAGCGGAGCAATGGGAGGCTAGCTTAGCA
CGCTTAAAAAATGAAATTAATCGATGCGATATCGAAACAAAGACCTTTCT
GGCGCCAATTTTGAAACATCCTTCGGCGCAGCAGGTCTTGGTCTCGTTTT
TGTCTGATCCCAGCAAGTCGTTTCAAGACTGGATCTGGGAGCCACGGGCG
CACGAAGTCCTCAATCGCTTCCGGAGCTCCCTCTCACAGCAAACCTCGCA
AGGTACCGTCGAGCTTTTCTTCCCTCCGCATCGTCGCCCTCCTCCCCCCT
CCTCCCTCTACCTCGTTCCTCACATCCCTCCTCTGTACCTCTCCGGATGC
TTTATCGTGCACCTCTTTTCGCATGCCCTCATTCTCTGGCGAAAGCTTTC
TTATAGCGTCGTGAGTGTCCTCTACCCTTTTCTCTCGGCGGCCCTGGCCT
TTCCTCCCTCCATCCCGCCCCCACTCCTTCCCTCCTTCCCTCCTTCCCTC
CTTC back to topprotein sequence of rna5839 >rna5839-protein ID=rna5839-protein|Name=rna5839|organism=Nannochloropsis gaditana|type=polypeptide|length=221bp
FPPFPPFLLVLSPLPVLTPSMHRATAIRTPRFDTKPSTPPPPPSLPSSSV
QRHAGEEVGPHPEGWEEALARMEEEKLKRDQHMAAVQPGHAAHSSLPSSL
PSSRPPSSSPGVCEESLVPREYIEWVDAWLHMLLDGRAPGREGGREGRRE
GRKRKGPLSRKAGKGSQKVSEHRNGSRKREVVGGLACLLLSSFPPSRPPS
LLPTFHPSLSPSRKPSVSLSP back to topmRNA from alignment at CM002466.1:965366..967206+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5839 ID=rna5839|Name=rna5839|organism=Nannochloropsis gaditana|type=mRNA|length=1841bp|location=Sequence derived from alignment at CM002466.1:965366..967206+ (Nannochloropsis gaditana)
ttccctccctttcctccctttttgctagttctctctcccctaccTGTCCT
CACTCCATCCATGCACCGTGCTACCGCCATCCGTACACCACGATTCGACA
CGAAACCATCgacccccccacccccgccctcccttccttcctcatcagtA
CAACGTcacgcgggggaggaggtgggcccTCATCcggaaggatgggagga
ggcgctcgcccgcatggaggaggagaaactgaaggttgggagggaggacg
aggaatgATAATGATAATAGGAGTCGTATATGTAACACGTATGCACAGGG
AGTGGACGACCCCGGCACAATGACACGGACTTCAaacgctctctccctcc
ctccctccctccctctttccctcccaccgtccTACTCCCCCTCTCTTGCA
GCGCGACCAGCACATGGCTGCGGTCCAGCCAGGGCACGCagcccattcct
ccctcccttcctccctcccttcctcccgcccgccctcttcctctcccggg
GTGTGTGAGGAAAGCCTCGTCCCTAGAGAATACATCGAATGGGTTGACGC
CTGGCTTCATATGCTCCTCGATGGCCGTGCTCccggtagggagggaggga
gggagggaaggagggaggggaggaagaggaagggtcCTCTGTCCAGGAAG
GCCGGGAAAGGAAGCCAAAAAGTGTCAGAACACAGAAATGGAtcaaggaa
aagagaagtaGTCGGCGGTcttgcttgcctcctcctttcctccttccctc
cttcacgccctccctccctccttccaaccttccatccctccctgtctccc
tcccgcaagccctccgtttccctctctccttgaaCGCGGCGGAGCGGCGC
GCGATTCACGCGCGCTGCAAACCTCGTGGACTCAACAGCAAGAGTGCAGG
Aggcaaaaagggagggaaaggggagggggggggaggagcaggggaaggga
gccggCAGGTATGGGTATTctggaaagaagaggaaaaacgGAGGGCGTGC
GAGGGCTATGTTcaggtggggaagaagggagggaggaatggagggagaaa
gggaggatggatggGACTGAGCCTTGCATACATATTTTTTTGAGGGAAAG
GAACGAGCCTCGAGAATCAAAGGCGTGCGATTCTGGTCTGAACATCCGTT
TCCTTCCtacgtcttccccttcccaaccccacccctgcctgcgccctccc
tctcttcctccctccttagaTCCCGAGCGCTGCGAGCTACCCGTCGCCGG
ACCTGATTGCCTCGCTGCCCGTCTTGAGGATAGAAGATAATGGtgttccc
cttcccctcgccttAAAGCaatcttcttctccctctcctccccctgctcc
ttctgctgctccgcctgccctcctcactcctcatccttcctaaccccttt
ctccctcttttcttcctcataTTCGTGAACGTGTAACCGTAAATAAAGTA
TCCGCCACGCAGATTGAATTCGATAGTGTACAAGGACTAGACCAGGCGTG
AAAAGACGAAAAACCAGCCAAGCGAATATTTTGATGCTTGTCAAGACTTT
GAAAGCTGCTTTCAACCTGTATCACCTGGATTTCATCGTATGCTTTTTTC
TCTTCaagtctttcttttcctgcttaTGAAGCACCGAGAAATAGCATACC
CTGCCCTCGCATTTCTGGAGTAAAGATCATGGCATCCCACTCGCCTCGTC
CATTCGGGCGCTTTCCTGAttattttttcctcctcttcatcaatCAAATC
ATACACACTGATACGTTCAATCTAGGTTTGCCCTCAATATTTTACCGGAT
AAAACCATAGTGTTTCTTTATTGAAATCGTGGCTGTTTTGC back to topCoding sequence (CDS) from alignment at CM002466.1:965366..967206+ >rna5839 ID=rna5839|Name=rna5839|organism=Nannochloropsis gaditana|type=CDS|length=1332bp|location=Sequence derived from alignment at CM002466.1:965366..967206+ (Nannochloropsis gaditana)
ttccctccctttcctccctttttgctagttctctctcccctaccTGTCCT
CACTCCATCCATGCACCGTGCTACCGCCATCCGTACACCACGATTCGACA
CGAAACCATCgacccccccacccccgccctcccttccttcctcatcagtA
CAACGTcacgcgggggaggaggtgggcccTCATCcggaaggatgggagga
ggcgctcgcccgcatggaggaggagaaactgaagCGCGACCAGCACATGG
CTGCGGTCCAGCCAGGGCACGCagcccattcctccctcccttcctccctc
ccttcctcccgcccgccctcttcctctcccgggGTGTGTGAGGAAAGCCT
CGTCCCTAGAGAATACATCGAATGGGTTGACGCCTGGCTTCATATGCTCC
TCGATGGCCGTGCTCccggtagggagggagggagggagggaaggagggag
gggaggaagaggaagggtcCTCTGTCCAGGAAGGCCGGGAAAGGAAGCCA
AAAAGTGTCAGAACACAGAAATGGAtcaaggaaaagagaagtaGTCGGCG
GTcttgcttgcctcctcctttcctccttccctccttcacgccctccctcc
ctccttccaaccttccatccctccctgtctccctcccgcaagccctccgt
ttccctctctccttgattccctccctttcctccctttttgctagttctct
ctcccctaccTGTCCTCACTCCATCCATGCACCGTGCTACCGCCATCCGT
ACACCACGATTCGACACGAAACCATCgacccccccacccccgccctccct
tccttcctcatcagtACAACGTcacgcgggggaggaggtgggcccTCATC
cggaaggatgggaggaggcgctcgcccgcatggaggaggagaaactgaag
CGCGACCAGCACATGGCTGCGGTCCAGCCAGGGCACGCagcccattcctc
cctcccttcctccctcccttcctcccgcccgccctcttcctctcccgggG
TGTGTGAGGAAAGCCTCGTCCCTAGAGAATACATCGAATGGGTTGACGCC
TGGCTTCATATGCTCCTCGATGGCCGTGCTCccggtagggagggagggag
ggagggaaggagggaggggaggaagaggaagggtcCTCTGTCCAGGAAGG
CCGGGAAAGGAAGCCAAAAAGTGTCAGAACACAGAAATGGAtcaaggaaa
agagaagtaGTCGGCGGTcttgcttgcctcctcctttcctccttccctcc
ttcacgccctccctccctccttccaaccttccatccctccctgtctccct
cccgcaagccctccgtttccctctctccttga back to top
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