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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101623g1.9001.mrna |
| Orig protein id | gnl|cribi|Naga_101623g1.9001 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:957772..959192 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5834 ID=rna5834|Name=rna5834|organism=Nannochloropsis gaditana|type=mRNA|length=1464bp
AAGGCGTCTTCCTTTTCCACCACACTCTCATCCTCCGAGTCACTGCCAAG
CCCCAGGTCCTCTATCACGTCCTTTGATGCCATGCCTACAGGGTGAACGC
AATCTTGGGAATGCGTGTTTCGGGGGCCTACGTCTGTCGGGAAGAAGGAA
GCTTCATCAGGTCATTCACATGTGCGGCCCAACGCCTTCCGGCATGTGCG
GGACACACCGGCGTCACAGTGCCTTAAAATTGTATACGACCACTTCCTGG
GAGGATTACTCCCTCATATCATCACCCGTTGTCCCAATCTATGTGGAACT
CACTCGAATTGAGTCCTGAAAATTTTCCTTGGGAGGGAATACGGTGGGGC
AAGTCGCTCCGGCCTCTCTGATAGAGGGTATTGATACGCCTTGGCATTGA
AGCCCTTTTTGCATATTCCACTTTTATTTTTCTCTCCACACAGCAATCTG
ACCGTTGTATGTACCTGTATACATGACACCGGTGCATTTTTCCTAACTAC
ATTCCTCTCCGCCCTCACAACACGTCCAGTAGCATAACCAAGTGTACGCC
ACCAGGAGGTTGCAGCTTACCAAAGACTGCCTTCAAGCCCAGGCGTTCAT
ACAGCTCGCTCACACATTGCGTACAACGCATTTCCCGAATGGAAATCTTG
TCGACGAATGACGGCCTGATCACCGACCTAGACGCCTTCTTGCTTATAAA
AGAAAGGACAGCCAAGCGCGAGTCAGACAAGGGGGTGAAAGGGCGAAAAG
GTGATGTCCGATCACAAAAGACACTGACCAAAAATAGGGACTGGGTCCAG
AAGGAGGTAACGAAAGGGAGGGAGAGGGTGGAGGGAATGAGGGCCGAAGG
GGGGGGGGAAGAGGAGGAGTAACGGAGGGAGGGAAGGGAAGAGAAAGAAA
CGAATCAAGACCGGCGAAAAACGTTAAGAGCATGTAACAGAGAGATGAAG
ACACGCCATCCTGGCATCCCGACACGGCACAGATACTCCGATGTTTAGCG
GAGCTCCCCGCGGGGGGGGAGACCACGGTTGGTGTCCAGGTGAGTGCTCG
AACGACACGCCCCTTTCCCATACCTCCCTTGCCATTTTGGACCCAACGTC
GATCCTAGAAGCCGTGTCTTTGCGCCTTCTTACGCCCCCTTCCGTCTTCC
TCTTCCTCCTCCCCACCATCCCTGCAGTCCTTCCTCAAGGCCTTGCAGGC
GTTCTCGGTGACAAGCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCGTCCG
GCACTGCCGCCCCCGCTTTCAATCGCCAATCTGCCCGCACGTTCACACTG
GCCGAGACCCTTCAATTAATCAACATGCGGCCCACGGCACCGGTAGAGGT
GCACTTGGTAGGAAGAAAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGA
GGGAATGAGAGATGGTAGGTAAGACGTGCATGTATGGATGCGGACGAGGG
ATGGGGAGGATGGA back to topprotein sequence of rna5834 >rna5834-protein ID=rna5834-protein|Name=rna5834|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
FFLQTTRREPLRPYLLCKVRGIRRAQQALQEATAGGTGCAPNSREEKRAR
CARAMPAWARGRVGKGEALPVFDLRGGTRGGAGGGGEGGKGEDEGKEGGK
DGGKVEEEILRAVCQYVVSPLSPGGEGGGEGGTEEKGGGVQGKAKAGRTS
SVFSRRPNSRRPRRIISFKKLASEGKNAAEAMGEEGMEGGGMTEAVFEEL
MMLLAPAWDPARREGGREGGGGMDVGE back to topmRNA from alignment at CM002466.1:957772..959192- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5834 ID=rna5834|Name=rna5834|organism=Nannochloropsis gaditana|type=mRNA|length=1421bp|location=Sequence derived from alignment at CM002466.1:957772..959192- (Nannochloropsis gaditana)
TTCTTCCTGCAGACAACGCGGCGAGAACCCCTCCGGCCCTATCTTCTCTG
CAAAGTTCGCGGCATTCGGCGGGCGCAGCAGGCCCTACAGGAGGCGACCG
CGGGGGGCACTGGCTGTGCGCCCAACAGTCGAGAGGAGAAACGAGCACGC
TGCGCGCGGGCCATGCCAGCTTGGGCGCGGGGGCGGGTGGGGAAGGGAGA
AGCTTTGCCTGTCTTCGACCTCAGGGGCGGTACCAGGGGGGGTGCGGGGG
GGGGAGGGGAGGGGGGAAAGGGGGAGGACGAGGGGAAGGAGGGAGGGAAG
GATGGAGGGAAGGTTGAGGAGGAGATCCTACGGGCCGTGTGTCAGTACGT
GGTGTCGCCCTTGTCGCCGGGCGGGGAGGGAGGGGGGGAGGGCGGGACAG
AGGAGAAGGGAGGGGGGGTGCAAGGGAAGGCGAAGGCTGGCCGTACGTCG
TCGGTCTTTTCTCGGCGTCCGAACAGCCGGCGGCCGCGGCGTATTATTTC
CTTTAAGAAATTGGCAAGCGAAGGGAAGAATGCGGCGGAAGCGATGGGGG
AGGAAGGGATGGAGGGAGGGGGGATGACGGAGGCTGTGTTCGAGGAGTTG
ATGATGCTTTTGGCGCCGGCCTGGGACCCGGCACGACGGGAGGGAGGGAG
GGAGGGAGGGGGGGGCATGGATGTCGGGGAATGAGGCCGTGGGGTGCATG
GACAGGGCGTGAAGGAGCGTGCTGATCGCGTGCCTGGTGAAGAAGAGGAT
GGAAACCCTGTGGGCCCCGCTGAGGGCTGGCCGGCCTAACAACCTCTACC
GTCAGTGTCCAGGTCGCGGTAAAGGCGTGTGGTCAAAGGGAAGGGAGGGA
AGGAGGGCGGGAGGGAGGCGTCGACGAAGCGAGGAAGGAGGGGGAGGAAG
AGGGAAGGAATGTGGGTTCGGCGTGGGGAAGGCAGGTTTTTTTGGCAGTC
GCCGCAGCACCGCAACGCCGCCGGGAGCCTACCTTGTATCGGGAATGACT
CTCTTCTTTACTCTACCATTCACGGCAACGGTTGATCTTCCCTCTTCCGT
GTCGAAGGACGTGAGGCGGTTGCGAAAGATGACTTGCCAGTTGTGTAAGC
GAAATTTTGAATGCCCGGAATCGGGCGACCGTTGAAATTATGATTTTGAA
ATCGAGGGTCCCGGAACCCTCTTGTGTCTGATGCAAAGCGCAGATGAAAA
GGAGCGGGAGCTTTTCCCTCGCTACCTTAACTTTTGAAGGTCATGAAATA
TGCGATAACAGCGTGTTGGCGATGAAGATCCATTTTGAGCGAGCCGTTAA
AGAAAGGTCGCCCTGGCCGTTACCAGAATCACACAAAATGATTGAATCCA
CCTTCAGGAAAGGAATGAACGAACGTCAAAGCTTTCTCCCCGCAAGAGGA
GGATCGATAAGGACATTTCCA back to topCoding sequence (CDS) from alignment at CM002466.1:957772..959192- >rna5834 ID=rna5834|Name=rna5834|organism=Nannochloropsis gaditana|type=CDS|length=684bp|location=Sequence derived from alignment at CM002466.1:957772..959192- (Nannochloropsis gaditana)
TTCTTCCTGCAGACAACGCGGCGAGAACCCCTCCGGCCCTATCTTCTCTG
CAAAGTTCGCGGCATTCGGCGGGCGCAGCAGGCCCTACAGGAGGCGACCG
CGGGGGGCACTGGCTGTGCGCCCAACAGTCGAGAGGAGAAACGAGCACGC
TGCGCGCGGGCCATGCCAGCTTGGGCGCGGGGGCGGGTGGGGAAGGGAGA
AGCTTTGCCTGTCTTCGACCTCAGGGGCGGTACCAGGGGGGGTGCGGGGG
GGGGAGGGGAGGGGGGAAAGGGGGAGGACGAGGGGAAGGAGGGAGGGAAG
GATGGAGGGAAGGTTGAGGAGGAGATCCTACGGGCCGTGTGTCAGTACGT
GGTGTCGCCCTTGTCGCCGGGCGGGGAGGGAGGGGGGGAGGGCGGGACAG
AGGAGAAGGGAGGGGGGGTGCAAGGGAAGGCGAAGGCTGGCCGTACGTCG
TCGGTCTTTTCTCGGCGTCCGAACAGCCGGCGGCCGCGGCGTATTATTTC
CTTTAAGAAATTGGCAAGCGAAGGGAAGAATGCGGCGGAAGCGATGGGGG
AGGAAGGGATGGAGGGAGGGGGGATGACGGAGGCTGTGTTCGAGGAGTTG
ATGATGCTTTTGGCGCCGGCCTGGGACCCGGCACGACGGGAGGGAGGGAG
GGAGGGAGGGGGGGGCATGGATGTCGGGGAATGA back to top
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