EWM24854.1, cds5819 (CDS) Nannochloropsis gaditana

Overview
NameEWM24854.1
Unique Namecds5819
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:958509..959192 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24854.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101623g1.9001.mrna
GbkeyCDS
End range.
End range959192
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:958509..959192 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24854.1 vs. NCBI_GenBank
Match: gi|585106459|gb|EWM24854.1| (hypothetical protein Naga_101623g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 435.647 bits (1119), Expect = 4.544e-154
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 
Query:    1 FFLQTTRREPLRPYLLCKVRGIRRAQQALQEATAGGTGCAPNSREEKRARCARAMPAWARGRVGKGEALPVFDLRGGTRGGAGGGGEGGKGEDEGKEGGKDGGKVEEEILRAVCQYVVSPLSPGGEGGGEGGTEEKGGGVQGKAKAGRTSSVFSRRPNSRRPRRIISFKKLASEGKNAAEAMGEEGMEGGGMTEAVFEELMMLLAPAWDPARREGGREGGGGMDVGE 227
            FFLQTTRREPLRPYLLCKVRGIRRAQQALQEATAGGTGCAPNSREEKRARCARAMPAWARGRVGKGEALPVFDLRGGTRGGAGGGGEGGKGEDEGKEGGKDGGKVEEEILRAVCQYVVSPLSPGGEGGGEGGTEEKGGGVQGKAKAGRTSSVFSRRPNSRRPRRIISFKKLASEGKNAAEAMGEEGMEGGGMTEAVFEELMMLLAPAWDPARREGGREGGGGMDVGE
Sbjct:    1 FFLQTTRREPLRPYLLCKVRGIRRAQQALQEATAGGTGCAPNSREEKRARCARAMPAWARGRVGKGEALPVFDLRGGTRGGAGGGGEGGKGEDEGKEGGKDGGKVEEEILRAVCQYVVSPLSPGGEGGGEGGTEEKGGGVQGKAKAGRTSSVFSRRPNSRRPRRIISFKKLASEGKNAAEAMGEEGMEGGGMTEAVFEELMMLLAPAWDPARREGGREGGGGMDVGE 227
The following BLAST results are available for this feature:
BLAST of EWM24854.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106459|gb|EWM24854.1|4.544e-154100.00hypothetical protein Naga_101623g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5834rna5834Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications