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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100381g4.8974.mrna |
| Orig protein id | gnl|cribi|Naga_100381g4.8974 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:949526..949953 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5828 ID=rna5828|Name=rna5828|organism=Nannochloropsis gaditana|type=mRNA|length=2772bp
AACGGGGGAAATGCGGGCACCTTCCAGTTAAAACATATGGATGCTGGGCA
ACCGTCCTTTGCTGCCTTGTGCATGTCGTCTTGCATGAGTTCTTGTATAA
TTCCCCCCTCTTTCTGATCCACTATTTCCGGCTGTCGGTCTTCAAGAGTT
TCGGGCTGCGTTTACTTCAACGCAAACTGCACTTTGATTATGCATCTTGA
GTTACCATGTAGGTACACCACACTTACCTGTTTTACGCATGCTTGGATTA
GATTCTTCTTCTTCTGTAAGAAGAACGAACGGAACTCACTGATGAGGCTA
GAAACGATTCTTGCGTGCCACTATTTTATGGACATGGTCCGAGCTTTGCT
GATCCACGTTTGTTATCTGGGATACGACATGCTCTGAACCATAACCCCCA
AACGCTCTCAATGTCAATCCAAGGGGGCAAGGTAGCCAATTGTGCTGGAC
GATCACTGACAACCAGTTATGTACCAATTACCCTTTCAAGCATTGTGTCA
AAAAATTTCTTCTTTAATGTTATTCGTTGCTGTTCTACGATAGTCGGGCA
GTGGCGGTATATTGATCCGATTGACTGGACATTCGCCGTTGCATTGGCAA
GGCCACACTGCCTCTACCTGGCCAATAAGAATACCTATGATGAATGCACA
GGATCGTGGGCTGGGACCTTTGCCTCCGCGAATATGCTGATAGTTTTACT
TACACCCCACCTCTTGTATACCTACCCTCACTCATGACTAGATTCGCTCC
GAACGGCTCACACGACTCTGCCCGGCATTCAGCAAGCCTCATGCCGCCAG
CCTCCACTCCTTCTTCATCGTCAACGCCTGCTGTTTCCCCCCCAGCCGCT
TCCCCCCCCCTTCCTGTGCTGAGCCCGCATATCGTCTCCGTGGTGAAATC
CACCGCGCCCGTCCTGGCGGCTCAAGGCCCCCGCATCACCCAGGCATTCT
ACCCGCTCCTCTTCTCCCGGTACCCTGCCGTCCAAGAACTCTTCAACAAA
CGCAACCAAGCGCCGGAACCCGATGGGACGCCCGCCCGACAGCCTCAGGC
CTTGGCCAATGCCGTCTGGGCCTACGCGGCCAACATCGATAACCTCTCCG
CCCTCTCCGCGGCCGTCTCCCTGATTGCCCACAAACACGCCTCCCTCCAC
GTCCTCCCCGAGCACTACCCGATGGTTGGAGAGTGCCTCCTGGCGGCCAT
TGCGCAGGTATTGGGTCCCGAGGTGGCGACTGTGGAGGTGCTGAAAGCCT
GGGAGCAAGCGTACGGATTTTTGGCCGCCGTCTTCGTCCAGACAGAGGAC
GGACTCCGGTCCAGCAATGCCCGGAAGCGGCACGGGTGGACGGGGTGGAA
AACCATGCGGGTGGCACGGAAGGTGATGGAATCGGAGGATGTGGCTTCCT
TCTACCTGAGCAATGTGCAGGTCGGGGAGCCCGTGTGCGCCTACCTACCG
GGCCAGTACATCTCCCTCCGCCTGACCCTGCCCGACGGGGAGGTCGAAGA
GCGAGACTACAGTCTGAGCGAGTTTGCTGTACCCGCGTCCGCGCATGCCT
TGGAGCCGGGCGGGAAAGCGCGATCGGCCGAGGAGGAGGGAGGGAAGAAG
GAGTGTAAGGGGGAAGGCCGGGGAGAGGATGGGAAGGAGGAAGGGGATTG
CCCCCCCTATTTCCGCATCAGCATCAAGCGTCTCCCGGGGGGTGCCGTAT
CCACCTACATGCACGACAAGGTGGAGGAGGGAAGCGAGATTCTGGTCGGG
CCACCCTACGGCGACTTTGTCCTCGCCCCTCCCTGTACCCCTTCCTCCTC
CCCCTCCTCGCATCCACGGCCCCTGGTCCTCCTCTCAGCCGGGATTGGCA
TCACTCCCCTGCTTTGCATGGCCGAAGCCGCGTTGCTCGGCACGCCGTCG
CAAGAGAGCAAGGAGCATCGACCCTCTTTCCCTAAGTCTTCTTCCTCCAC
ACGGCCAGGGACGCGGCCCATTTCCCCTTTGCGGCCCGTCTTGCGAGCCT
TGCGGCCACACATCCCACCCGCTTTGCCTGCCACGTGTCCTTCACACAAG
GAGCCGTAGAGGGAGGGGCGGAGGGAGGGAAGGAGGGAAAAGTCCGATGG
GGCACGGGGCGGTTGACGGCGAGCGCCTTACACGAGGCGTTGGGCGGGAA
GGTACGACCGCAGGACTGTAGCTTCTACTTTTGTGGACCGGCGGGGTACA
TGGTGAGCGTTCGACGCTTGTTGACGTGGTTGGGAGTGCCCGCGGAGGAG
GTGAAGTATGAGTGTTTCGGCCCCGCATCGGCCGAGGTGGAGGCGGCGGG
GGTGATACCGTCGAGTTTTTCTTGAGGAGGAGGGAGATGAGGCGAGAAAG
GGAAGGGGGAGGAGGTGGAAGAGAGGCGTGGTGTCGGGAGCAGGGCAAGG
GGTCAAAAATAGGAAATGTGCTCGAAATTGCTTCGGGAAAAATGCAGCCA
GGCAGCTCAACAGTGTATGTGCATAGAGAATTTTCACAATCCCATTGTTC
CATCCTCATGACCATGGGGCGGAACTTGAATGAGTAGGCGACTGGCATGG
AATTACAACAACATTTTGCAGGCAAGGGACGGGCGTTGGAAGTCGACGTC
AGCATCAGCACGCGAACGCCCCACATAGTTTTCAGAAAGACTTGAAATAT
CGATGCATGACAATACAGCATTCCCAAATAAAGAAATCCATCTGATCGCG
CGAGGATACACTGCACTGTCCACGGATCAAACCCCCGCGAGACAACCAAA
GCAAGGGGGCTTTCACTGTATA back to topprotein sequence of rna5828 >rna5828-protein ID=rna5828-protein|Name=rna5828|organism=Nannochloropsis gaditana|type=polypeptide|length=99bp
MVPQFAQSTYGDLPSVQDYSFLECVKVAFSTVSFYVQDAYVWLVLFWESF
SETYSDPAFELHLQIHTYISIMHINSFVPGILGRAGLDNSKFDGTPDDC back to topmRNA from alignment at CM002466.1:949526..949953+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5828 ID=rna5828|Name=rna5828|organism=Nannochloropsis gaditana|type=mRNA|length=428bp|location=Sequence derived from alignment at CM002466.1:949526..949953+ (Nannochloropsis gaditana)
ATGGTTCCACAATTTGCACAAAGTACTTATGGCGACCTTCCTAGCGTGCA
GTAAGCAGATGTTCCAGCTCGAGCCCCCCACCCTCTTGTGACATACGGAC
ACTCATGCACCCATTGACCCACAACATGTAAAACGTTATTGAAATTTGAC
GTGGTTACTTTTGATGTCGCCATGCAAGAGACTATTCCTTCCTGGAATGC
GTAAAAGTGGCGTTTTCGACGGTCTCCTTTTACGTGCAAGACGCGTACGT
ATGGCTTGTCCTATTTTGGGAGTCCTTTTCGGAGACGTACTCAGACCCAG
CTTTTGAATTGCATCTTCAAATCCATACATATATAAGTATTATGCATATT
AATTCATTCGTTCCCGGCATTCTTGGTCGCGCGGGTCTTGATAATTCAAA
GTTTGATGGTACTCCTGATGACTGCTGA back to topCoding sequence (CDS) from alignment at CM002466.1:949526..949953+ >rna5828 ID=rna5828|Name=rna5828|organism=Nannochloropsis gaditana|type=CDS|length=600bp|location=Sequence derived from alignment at CM002466.1:949526..949953+ (Nannochloropsis gaditana)
ATGGTTCCACAATTTGCACAAAGTACTTATGGCGACCTTCCTAGCGTGCA
AGACTATTCCTTCCTGGAATGCGTAAAAGTGGCGTTTTCGACGGTCTCCT
TTTACGTGCAAGACGCGTACGTATGGCTTGTCCTATTTTGGGAGTCCTTT
TCGGAGACGTACTCAGACCCAGCTTTTGAATTGCATCTTCAAATCCATAC
ATATATAAGTATTATGCATATTAATTCATTCGTTCCCGGCATTCTTGGTC
GCGCGGGTCTTGATAATTCAAAGTTTGATGGTACTCCTGATGACTGCTGA
ATGGTTCCACAATTTGCACAAAGTACTTATGGCGACCTTCCTAGCGTGCA
AGACTATTCCTTCCTGGAATGCGTAAAAGTGGCGTTTTCGACGGTCTCCT
TTTACGTGCAAGACGCGTACGTATGGCTTGTCCTATTTTGGGAGTCCTTT
TCGGAGACGTACTCAGACCCAGCTTTTGAATTGCATCTTCAAATCCATAC
ATATATAAGTATTATGCATATTAATTCATTCGTTCCCGGCATTCTTGGTC
GCGCGGGTCTTGATAATTCAAAGTTTGATGGTACTCCTGATGACTGCTGA back to top
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