EWM24859.1, cds5813 (CDS) Nannochloropsis gaditana

Overview
NameEWM24859.1
Unique Namecds5813
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:949526..949575 +
Alignment locationCM002466.1:949704..949953 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24859.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100381g4.8974.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:949526..949575 +
CM002466.1supercontigCM002466.1:949704..949953 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24859.1 vs. NCBI_GenBank
Match: gi|585106469|gb|EWM24859.1| (hypothetical protein Naga_100381g4 [Nannochloropsis gaditana])

HSP 1 Score: 206.453 bits (524), Expect = 1.333e-67
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 
Query:    1 MVPQFAQSTYGDLPSVQDYSFLECVKVAFSTVSFYVQDAYVWLVLFWESFSETYSDPAFELHLQIHTYISIMHINSFVPGILGRAGLDNSKFDGTPDDC 99
            MVPQFAQSTYGDLPSVQDYSFLECVKVAFSTVSFYVQDAYVWLVLFWESFSETYSDPAFELHLQIHTYISIMHINSFVPGILGRAGLDNSKFDGTPDDC
Sbjct:    1 MVPQFAQSTYGDLPSVQDYSFLECVKVAFSTVSFYVQDAYVWLVLFWESFSETYSDPAFELHLQIHTYISIMHINSFVPGILGRAGLDNSKFDGTPDDC 99
The following BLAST results are available for this feature:
BLAST of EWM24859.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106469|gb|EWM24859.1|1.333e-67100.00hypothetical protein Naga_100381g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5828rna5828Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications