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Properties
| Property Name | Value |
|---|
| Product | Ubiquitin supergroup |
| Orig transcript id | gnl|cribi|Naga_100381g1.8975.mrna |
| Orig protein id | gnl|cribi|Naga_100381g1.8975 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:939957..941867 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5825 ID=rna5825|Name=rna5825|organism=Nannochloropsis gaditana|type=mRNA|length=294bp
ATGAAAGCCCCCTCTGTGTTCGGCGGGCCATCGGGCGCGAGTACCACGAC
TGCGGGCGGTAGTAGCAGCAGCAGCAGCAGCACCAGTGCGGGTGTGGCTG
GAAAAGCTAGTGTGGGTACGGCACCTATGCCGCCCTTGTCAATGAAAGCC
CCCTCTGTGTTCGGCGGGCCATCGGGCGCGAGTGCCACGACTGCGGGCGG
CAGCAGCAGCAGCAGCAGCAGCAGCACCAGTGCGGGTGTGGCTGGAAAAG
CTAGTGTGGCCAAACGTTCATCACCGCAGGCAGCAAAGCAGTAG back to topprotein sequence of rna5825 >rna5825-protein ID=rna5825-protein|Name=rna5825|organism=Nannochloropsis gaditana|type=polypeptide|length=442bp
MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDG
MSESSSSDDEDDDDVRPVSPRRPGRDKGPKRGRECLSSTDSLSSPSKRPP
PVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLD
GDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTS
VPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLRMGAALRANVTVE
VEDLVDTASVARETGLQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSD
VFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIY
VQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMA
AKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS back to topmRNA from alignment at CM002466.1:939957..941867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5825 ID=rna5825|Name=rna5825|organism=Nannochloropsis gaditana|type=mRNA|length=1911bp|location=Sequence derived from alignment at CM002466.1:939957..941867+ (Nannochloropsis gaditana)
GAGCAGGAAACTACCTTCGTGAGCGCCGTAGCGCACGTGGCGTACCCTAG
ATTATACGCAAATTAGGACATGTGTCAATTACCCTTGAGGAGCTGCTCGC
CTCATCGCTGCGCGCTTCATCAAGTCATTCGGGGATAATGTGCTACTTGA
ACGCTTTTTGTCATTATTTTGTCCAGGGCGTGCGGTTTGTCAAATAGGGA
CGGGAGCCTTCGTGTCTGATTGTCAAGCAACCGTTCTTTGTATTGCTCCA
TTCAAAGGGTGTCGTTTCCCCCCATAACTTTTATTTGTAGGAAAACGCCT
CCTTCGCGACacaggagagaggaggtacGGGCAACACACCCGGCTGCGGG
TAGGAAAAAAGGCGCTTTTCCACTGTATCGTGAAGCGAATAAAAGACATT
TAAAAAGAAGAATATGGCTGCGCCCGGTTCGGAGGTCTCGTCGGATGGAG
GCTTCGAACAAAGGAGcgagacagaggaagaagtctTGGATGGGGGAGGT
ATTTTCACCTATAAACCCGTCGCATACGCCctgggaagacgaggaaaaga
CGCCGTCGATGGAATGAGTGAAAGCAGTAgcagcgacgacgaggacgacg
acgacgtcCGACCCGTTTCCCCCCGTAGACCTGGAAGAGACAAGGGGCCa
aaacgagggcgggagtgTCTATCGAGTACAgactccctctcttccccttc
caagagaCCCCCCCCGGTGGTCGAAATTGAGAGCGACGAAAGCGATGACG
ATGGCGTGGTCCTACTGGTGACGACGAATGGCAAACATAGAGAGAAAACA
GAAGCGTCGGGTCGCGGCGcatcggacgaggaggaagacgtcgaCATTGG
CAGGTATCTGGATGGGGAcatccaagaggaggaattgaCCACGCTACAGC
CGGCGGccacgggagggaaaaggaggggcaaggggccAAATGGGACAGGA
AACGGACGACCCATGCTCGCCACAGGCACTAGGGTAGGCTCATGCCCCAA
CGGCAGGACCTCAGTGCCCGGATTGGGCGCCCCACCCGCTGCCGTGGACG
TgactgcggaggaggaaatgacggCACAACCACATGCCAAGGCTCGCCTC
GAAGCATTGAGGGCGGATACCTTGCGAATGGGGGCGGCCTTGCGGGCCAA
TGtgacggtggaggtggaggacctggtggaCACGGCTAGTGTCGCCAGGG
AAACGGGACTCCAAAAAGCGACGACGACTGAGGATAAAGTGATGCTCAAG
GTAGGGATGCAGGGGCGTCAGCTACAACCCTTCCGAGTGTATACCTACAG
CATGCTTTCGGACGTGTTTGACGCCTACGCGCGCATCAAAGGTCTGCGTT
CGGAGGATCTGACCTTTAGCTATCAAGGGATGGAATTGGAAGGTTTCGAT
CAGCCGCGCTACGTAGGCATGGTGGCAGGAGACGATCCAAGCGCGGCTGG
AAACATCATTTATGTCCAAGACCGAGCGGCGTTGGCCGCCAAAACCGCGC
AAGCCCTTGCGGCGTCCAAGACGGTAAATTTAGTGCTGCAatggcaagga
ggacaagagaatGTGTCGATGAAAATGCAAGGAAGCTTTGGCGAGCTCAA
GAAAACGAtggcggcgaagaaaggTGTGGACGTGGCCACGGTGCGCTTTG
TGTTCGACGGGGTGACCTTGAGTGCGGAGACAACTCCTGAGCAACTCGAA
ATGGAAGACGAAGATACGGTGGACGTGTACGGATTGTCATGATGGGatat
ggggggggggcggaaaggaaagaaaggaggaagcctggctggagggaaaa
agcgtGTGTACGACGGGCGACGAGGTGCAAAGGACGACAGCTTGTAGATA
TGTAACACTTACAACGGGTTGATGTATTGATGGAGAGACAAATACGGCAA
CGATGCAGGAG back to topCoding sequence (CDS) from alignment at CM002466.1:939957..941867+ >rna5825 ID=rna5825|Name=rna5825|organism=Nannochloropsis gaditana|type=CDS|length=1329bp|location=Sequence derived from alignment at CM002466.1:939957..941867+ (Nannochloropsis gaditana)
ATGGCTGCGCCCGGTTCGGAGGTCTCGTCGGATGGAGGCTTCGAACAAAG
GAGcgagacagaggaagaagtctTGGATGGGGGAGGTATTTTCACCTATA
AACCCGTCGCATACGCCctgggaagacgaggaaaagaCGCCGTCGATGGA
ATGAGTGAAAGCAGTAgcagcgacgacgaggacgacgacgacgtcCGACC
CGTTTCCCCCCGTAGACCTGGAAGAGACAAGGGGCCaaaacgagggcggg
agtgTCTATCGAGTACAgactccctctcttccccttccaagagaCCCCCC
CCGGTGGTCGAAATTGAGAGCGACGAAAGCGATGACGATGGCGTGGTCCT
ACTGGTGACGACGAATGGCAAACATAGAGAGAAAACAGAAGCGTCGGGTC
GCGGCGcatcggacgaggaggaagacgtcgaCATTGGCAGGTATCTGGAT
GGGGAcatccaagaggaggaattgaCCACGCTACAGCCGGCGGccacggg
agggaaaaggaggggcaaggggccAAATGGGACAGGAAACGGACGACCCA
TGCTCGCCACAGGCACTAGGGTAGGCTCATGCCCCAACGGCAGGACCTCA
GTGCCCGGATTGGGCGCCCCACCCGCTGCCGTGGACGTgactgcggagga
ggaaatgacggCACAACCACATGCCAAGGCTCGCCTCGAAGCATTGAGGG
CGGATACCTTGCGAATGGGGGCGGCCTTGCGGGCCAATGtgacggtggag
gtggaggacctggtggaCACGGCTAGTGTCGCCAGGGAAACGGGACTCCA
AAAAGCGACGACGACTGAGGATAAAGTGATGCTCAAGGTAGGGATGCAGG
GGCGTCAGCTACAACCCTTCCGAGTGTATACCTACAGCATGCTTTCGGAC
GTGTTTGACGCCTACGCGCGCATCAAAGGTCTGCGTTCGGAGGATCTGAC
CTTTAGCTATCAAGGGATGGAATTGGAAGGTTTCGATCAGCCGCGCTACG
TAGGCATGGTGGCAGGAGACGATCCAAGCGCGGCTGGAAACATCATTTAT
GTCCAAGACCGAGCGGCGTTGGCCGCCAAAACCGCGCAAGCCCTTGCGGC
GTCCAAGACGGTAAATTTAGTGCTGCAatggcaaggaggacaagagaatG
TGTCGATGAAAATGCAAGGAAGCTTTGGCGAGCTCAAGAAAACGAtggcg
gcgaagaaaggTGTGGACGTGGCCACGGTGCGCTTTGTGTTCGACGGGGT
GACCTTGAGTGCGGAGACAACTCCTGAGCAACTCGAAATGGAAGACGAAG
ATACGGTGGACGTGTACGGATTGTCATGA back to top
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