EWM24860.1, cds5810 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|585106470|gb|EWM24860.1| (Ubiquitin supergroup [Nannochloropsis gaditana]) HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0 Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query: 1 MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDGMSESSSSDDEDDDDVRPVSPRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLRMGAALRANVTVEVEDLVDTASVARETGLQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIYVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS 442
MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDGMSESSSSDDEDDDDVRPVSPRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLRMGAALRANVTVEVEDLVDTASVARETGLQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIYVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS
Sbjct: 1 MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDGMSESSSSDDEDDDDVRPVSPRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLRMGAALRANVTVEVEDLVDTASVARETGLQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIYVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS 442
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|553179938|ref|XP_005852790.1| (small ubiquitin-like modifier-1 [Nannochloropsis gaditana CCMP526] >gi|422295742|gb|EKU23041.1| small ubiquitin-like modifier-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 874.004 bits (2257), Expect = 0.000e+0 Identity = 435/442 (98.42%), Postives = 437/442 (98.87%), Query Frame = 0
Query: 1 MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDGMSESSSSDDEDDDDVRPVSPRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLRMGAALRANVTVEVEDLVDTASVARETGLQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIYVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS 442
MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDG SESSSSDDEDD+DVRPV PRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTL MGAALRANVTVEVEDLVDTASVARETG QKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDP AAGNI+YVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS
Sbjct: 1 MAAPGSEVSSDGGFEQRSETEEEVLDGGGIFTYKPVAYALGRRGKDAVDGTSESSSSDDEDDNDVRPVFPRRPGRDKGPKRGRECLSSTDSLSSPSKRPPPVVEIESDESDDDGVVLLVTTNGKHREKTEASGRGASDEEEDVDIGRYLDGDIQEEELTTLQPAATGGKRRGKGPNGTGNGRPMLATGTRVGSCPNGRTSVPGLGAPPAAVDVTAEEEMTAQPHAKARLEALRADTLLMGAALRANVTVEVEDLVDTASVARETGPQKATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPRAAGNIVYVQDRAALAAKTAQALAASKTVNLVLQWQGGQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVYGLS 442
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|557129139|pdb|4BKG|A (Chain A, Crystal Structure Of Human Disumo-2) HSP 1 Score: 66.2402 bits (160), Expect = 2.699e-9 Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 0
Query: 269 ATTTEDKVMLKVGMQGRQLQPFRVYTYSMLSDVFDAYARIKGLRSEDLTFSYQGMELEGFDQPRYVGMVAGDDPSAAGNIIYVQDRAALAAKTAQALAASKTVNLVLQWQGGQE-NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
+T D + LKV Q + F++ ++ LS + AY +GL + F + G + D P + M D I Q + ++ + +NL + Q G +K +L K ++G+ + +RF FDG ++ TP QLEMEDEDT+DV+
Sbjct: 2 STENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDED------TIDVFQQQTG-----GRSTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVF 162
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|146446849|gb|ABQ41279.1| (SUMO-1-like protein [Artemia franciscana]) HSP 1 Score: 58.5362 bits (140), Expect = 2.429e-7 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 366 AASKTVNLVLQWQGGQE-NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
A S+ + L + Q E + +KM G+LKK+ + + GV V ++RF+FDG ++ E TP+QLEME++D ++VY
Sbjct: 11 ANSEYIKLKVVGQDSNEIHFRVKMTTQMGKLKKSYSERVGVPVNSLRFLFDGRRINDEETPKQLEMENDDVIEVY 85
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|321462723|gb|EFX73744.1| (hypothetical protein DAPPUDRAFT_231336 [Daphnia pulex]) HSP 1 Score: 58.151 bits (139), Expect = 3.790e-7 Identity = 29/75 (38.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 366 AASKTVNLVLQWQGGQE-NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
A S+ + L + Q E + +KM G+LKK+ + + GV V ++RF+FDG ++ + TP+QLEME++D ++VY
Sbjct: 12 AGSEYIKLKVVGQDSNEIHFRVKMTTQMGKLKKSYSERVGVPVTSLRFLFDGRRINDDETPKQLEMENDDVIEVY 86
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|1009553001|ref|XP_015911935.1| (small ubiquitin-related modifier-like [Parasteatoda tepidariorum]) HSP 1 Score: 57.7658 bits (138), Expect = 4.219e-7 Identity = 24/54 (44.44%), Postives = 41/54 (75.93%), Query Frame = 0
Query: 386 MKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
+KM G+LKK+ + ++GV V ++RF+FDG ++ + TP+QLEME++D ++VY
Sbjct: 32 VKMTTQMGKLKKSYSDRQGVPVTSLRFLFDGRRINDDETPKQLEMENDDVIEVY 85
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|1158591306|ref|XP_020303815.1| (SMO-1 protein [Loa loa] >gi|307767772|gb|EFO27006.1| SMO-1 protein [Loa loa]) HSP 1 Score: 57.7658 bits (138), Expect = 6.728e-7 Identity = 29/75 (38.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 366 AASKTVNLVLQWQGGQE-NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
++S+ + L + Q E + +K S G+LKK+ A + GVDV ++RF+FDG ++ E TP+ LE+E++D ++VY
Sbjct: 25 SSSEYIKLRVVGQDSNEVHFRVKFGTSMGKLKKSYADRMGVDVGSLRFLFDGRRINDEDTPKTLEIEEDDIIEVY 99
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|170591492|ref|XP_001900504.1| (Ubiquitin-like protein SMT3 [Brugia malayi] >gi|402586171|gb|EJW80109.1| SUMO protein [Wuchereria bancrofti] >gi|671406892|emb|CDP99981.1| Bm13906, isoform a [Brugia malayi] >gi|909102240|emb|CRZ26331.1| Bm5017 [Brugia malayi]) HSP 1 Score: 57.7658 bits (138), Expect = 8.015e-7 Identity = 29/75 (38.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 366 AASKTVNLVLQWQGGQE-NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
++S+ + L + Q E + +K S G+LKK+ A + GVDV ++RF+FDG ++ E TP+ LE+E++D ++VY
Sbjct: 25 SSSEYIKLRVVGQDSNEVHFRVKFGTSMGKLKKSYADRMGVDVGSLRFLFDGRRINDEDTPKTLEIEEDDIIEVY 99
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|957847572|ref|XP_014674276.1| (PREDICTED: small ubiquitin-related modifier 1-like [Priapulus caudatus]) HSP 1 Score: 56.9954 bits (136), Expect = 8.796e-7 Identity = 24/60 (40.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 380 GQENVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
G+ + +KM + G+LKK+ + + G+ +++RF+FDG ++ + TP+QLEME+ED ++VY
Sbjct: 29 GEIHFKVKMTTNLGKLKKSYSERVGMPASSLRFLFDGRRINDDDTPKQLEMENEDVIEVY 88
BLAST of EWM24860.1 vs. NCBI_GenBank
Match: gi|238816825|gb|ACR56783.1| (small ubiquitin-like modifier-1 [Litopenaeus vannamei] >gi|294860898|gb|ADF45345.1| small ubiquitin-related modifier protein [Eriocheir sinensis] >gi|310788575|gb|ADP24260.1| small ubiquitin-like modifier-1 [Scylla paramamosain] >gi|320382442|gb|ADW27186.1| small ubiquitin-like modifier-1 [Eriocheir sinensis] >gi|410466227|gb|AFV69239.1| small ubiquitin-like modifier SUMO [Procambarus clarkii] >gi|569344082|gb|AHE40942.1| small ubiquitin-like modifier 1 [Fenneropenaeus chinensis]) HSP 1 Score: 56.9954 bits (136), Expect = 9.116e-7 Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 0
Query: 383 NVSMKMQGSFGELKKTMAAKKGVDVATVRFVFDGVTLSAETTPEQLEMEDEDTVDVY 439
+ +KM G+LKK+ + + GV VA++RF+FDG ++ E TP+ LEME++D ++VY
Sbjct: 30 HFRVKMTTQMGKLKKSYSERVGVPVASLRFLFDGRRINDEETPKALEMENDDVIEVY 86 The following BLAST results are available for this feature:
BLAST of EWM24860.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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