|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101325g2.7216.mrna |
| Orig protein id | gnl|cribi|Naga_101325g2.7216 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:915626..917531 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5818 ID=rna5818|Name=rna5818|organism=Nannochloropsis gaditana|type=mRNA|length=932bp
CACATCCTCTCCCTCTCCTTCCTCATTCAGACTGTGAAGGACCCGTCCAT
CGCCCTGGCTGCCATCGACGCTTTCTTAGACTATGCACGCACGTACCTGC
GTGGGATGTCTGCGGAAGATTATGCTGCCAACGTCTCGGCCTTGGTGGAC
GCGAAGTTGGAGAAGCCCAAAAATTACGCCGAGCAGGGGAACCGGTATTG
GAACGAGATTGGTAAGGGCGCATATTTATTCGATCGGGCCGAGCGGGAAG
CGGCGGAGGCAAAGACCATCTCCAAAGAGGAACTCATTGAATTTTTGGGC
GCCTGTGTAGGGAGAAGGGAGGGCGGGGGGAGGGCGGGGGGGAGGGCGGG
CGGAAGCTGGTGGTGGTCATCCACGGTTCGAGCCACCCGGTTCCCCCCAT
GGAGGTGAAGGAGGCAGGGGACGGCGGGAGCTGGTGGGGGGGAGAAGAGG
AAGAGGAAGGAGAAGGCGGTCGGGCCAATGGAGGGGGGAAAGGGAAGCGG
TTGGTGAAAGTGAGGGACCCAGGATTATTCCGGCGCGGGCATGCGCTCTA
CCCCTTACGGCCTCAGATCGCTGTCAAATCGGTCGGCGTGGCGGAAGCGT
GCTCCTCGTCGGCGACCGCCTAGGTTATGGGGAAGGAGCACACAGGCGGG
GCGGGAGGAGGAGCGAGACTGCCCTGGGGGGGGGTGGACGGCAGATTGGA
AGGGGAGAGACAAGGGTCACGTGGGGTGAGATTCACGAGGGAAGGGAGCC
GAGAGGCCATCGGCGTAGGGTAGGTAAGAGGCAGGAGGAAGGGTCTGGGT
CAGGTGACAGGAGCTCGGGCAGCCATGCACTGGCGCCGTGAATAAATTTC
AAGTCAAAATTCAAATTGAGTCTCGCAAATGGAGAAAGGGGGTTGAAAAT
AATCATGGTCACCATGAAAGGTGCAGACGCAT back to topprotein sequence of rna5818 >rna5818-protein ID=rna5818-protein|Name=rna5818|organism=Nannochloropsis gaditana|type=polypeptide|length=302bp
LLPPSLPPSLPPFPPACRPLLPSISLLTLFPPSSSVCRQVDLRWDVFLGT
YYYWRLIKGVPLVPWGFIVPEEAPWPFFCRGVELGKMCDMIRRHQEVFFR
YYPERVQTLEYFGWKWWWPSMEEGEEPEAPQAYNRYNNFEGMDLVLKLKF
VDPEILSDAEVPDFEALQKEVPEAIPWREQDHRVGSESILEDEQAPTDIF
FVPGLRRHQRRQARLAGKGKTVGGAEAAGMNGGKEGGGEGGREEGLPEKK
TRGRKVGSGAGGKRKGKKEGGGEEGEEVTGTSAKVGGTTGPKKRGRKPKV
VE back to topmRNA from alignment at CM002466.1:915626..917531- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5818 ID=rna5818|Name=rna5818|organism=Nannochloropsis gaditana|type=mRNA|length=1906bp|location=Sequence derived from alignment at CM002466.1:915626..917531- (Nannochloropsis gaditana)
CTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCGGCATG
TAGGCCCCTGCTTCCCTCCATAAGCCTTCTCACCCTTTTCCCTCCCTCCT
CCTCGGTTTGCCGGCAGGTTGATTTGCGATGGGACGTTTTCCTAGGCACC
TACTACTACTGGCGGCTCATTAAAGGCGTGCCCCTGGTGCGGTTCTACCT
CTCTCTTTCTCTCGCTCTCTTTCTCTTTCCTCCCTCCTTACCCTGCCTTC
CTCCTTTTCCCTTGCACCGCATGAACTCAGCCTTCTTCTCCCTTGTCCCC
CTCTCCTCCCTCCCTCTCAGGTGCCGTGGGGGTTCATCGTGCCGGAGGAG
GCGCCCTGGCCGTTTTTCTGCCGGGGGGTTGAGCTGGGGAAAATGTGCGA
CATGATCCGGAGGCATCAGGAGGTAAACAGCGACGGGAGCAGGCGGGAAA
GAGGGAGTGATGGCGTTGCCGACGAGCGATGGACCCCCTTCTTCCTTCCC
CTCACTGTGTCCGACGCTGCTCGGCCATGGCCGATAGTCTCTCGCTCACC
CAACAGCTTCCACGTTTACAAGCAAGCACCTCATCCCCCTCCTCCCTCCC
TCCCTCCCTCCCTTCCTCAGGTCTTCTTCCGGTACTACCCCGAGCGCGTG
CAAACGCTGGAGTACTTTGGATGGAAGTGGTGGTGGCCAAGCATGGAGGA
GGGGGAGGAGCCCGAGGCCCCACAGGCATATAACCGCTACAACAATTTCG
AAGGCATGGACCTGGTGCTCAAACTCAAAGTAGGTCCCTCCCTCCCTCCC
TCCATCCCTCCCTCCCTCCCTTTACCCCCTCTTCCTCTATCGGTGGGAGC
AAGCAGGCAGGAGAGTGTGGTCCCAGGCGACTTCCTCGCGCCTCACCATC
CCCCTCTTCCTCCCCTTCCTTCCCCCTCCTCCTTCCCTCCCTTCCAGTTT
GTGGACCCGGAGATCTTGTCGGACGCGGAGGTGCCGGACTTCGAAGCCCT
CCAAAAGGAGGTCCCAGAGGCCATTCCCTGGCGGGAACAGGACCATCGGG
TACAAGCCCCGCCCCCCTCCCTCTTTTCCTTCCAGCCCTTCGACGGGCGC
CTGCTTTTTTATCCGCCCCCTTGTCTGCCTGTTCCTCATCTCCACGTCCC
TGTTCCATCCTTTCCTCGCGCTCCCTTCTTCCCTTCCCCCCTCTTGTGTT
TCCAACATGCCCCCCCTTGTCCCTCCCTTGTCCCCTGCCATTTCCCCCTC
CTTAGGTGGGCAGCGAGTCCATCCTCGAAGATGAACAGGCCCCTACGGAT
ATTTTCTTCGTCCCGGGCCTACGCCGTCATCAACGTCGGCAGGCGCGCTT
GGCAGGGAAAGGGAAGACAGTGGGCGGCGCAGAGGCTGCCGGCATGAATG
GAGGGAAAGAGGGAGGGGGGGAGGGCGGGAGGGAGGAAGGTCTTCCCGAG
AAGAAAACCAGAGGCAGGAAGGTAGGGAGTGGGGCGGGAGGGAAGCGGAA
GGGCAAGAAGGAAGGAGGGGGGGAAGAGGGGGAGGAGGTGACAGGGACGT
CGGCGAAGGTGGGAGGGACAACGGGCCCGAAGAAACGGGGCAGGAAACCC
AAAGTGGTCGAGTAGGTGCAGACAGAAAGAGGGAGGGAGAGGAAAGGAGA
AGGGGCGAATAAAGCGTAGGGTCGTCAGGGTGGGGTCGAGGGTGGTTGGT
AGGAACGAAGGACTGTGGTTCGGGGGATTAAAGGCACTGAGACAGATAGG
TGGTGATGGCGGGGGAGGGAGCGGGCATGTGGGCCGGAGAGGGGAGACAG
GAGGTTGGAAGGAGAGGGGGAGGGAGGGAGTTAGGGAGGGGGAGCAAGCA
GGGCATCGCGTCCTTATCTTCAAGAAAAGAAACGCGCAACTGAAGCATGG
TCTAAT back to topCoding sequence (CDS) from alignment at CM002466.1:915626..917531- >rna5818 ID=rna5818|Name=rna5818|organism=Nannochloropsis gaditana|type=CDS|length=4545bp|location=Sequence derived from alignment at CM002466.1:915626..917531- (Nannochloropsis gaditana)
GTGGGCAGCGAGTCCATCCTCGAAGATGAACAGGCCCCTACGGATATTTT
CTTCGTCCCGGGCCTACGCCGTCATCAACGTCGGCAGGCGCGCTTGGCAG
GGAAAGGGAAGACAGTGGGCGGCGCAGAGGCTGCCGGCATGAATGGAGGG
AAAGAGGGAGGGGGGGAGGGCGGGAGGGAGGAAGGTCTTCCCGAGAAGAA
AACCAGAGGCAGGAAGGTAGGGAGTGGGGCGGGAGGGAAGCGGAAGGGCA
AGAAGGAAGGAGGGGGGGAAGAGGGGGAGGAGGTGACAGGGACGTCGGCG
AAGGTGGGAGGGACAACGGGCCCGAAGAAACGGGGCAGGAAACCCAAAGT
GGTCGAGTAGTTTGTGGACCCGGAGATCTTGTCGGACGCGGAGGTGCCGG
ACTTCGAAGCCCTCCAAAAGGAGGTCCCAGAGGCCATTCCCTGGCGGGAA
CAGGACCATCGGGTCTTCTTCCGGTACTACCCCGAGCGCGTGCAAACGCT
GGAGTACTTTGGATGGAAGTGGTGGTGGCCAAGCATGGAGGAGGGGGAGG
AGCCCGAGGCCCCACAGGCATATAACCGCTACAACAATTTCGAAGGCATG
GACCTGGTGCTCAAACTCAAAGTGCCGTGGGGGTTCATCGTGCCGGAGGA
GGCGCCCTGGCCGTTTTTCTGCCGGGGGGTTGAGCTGGGGAAAATGTGCG
ACATGATCCGGAGGCATCAGGAGCTCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTTCCCCCCGGCATGTAGGCCCCTGCTTCCCTCCATAAGCCT
TCTCACCCTTTTCCCTCCCTCCTCCTCGGTTTGCCGGCAGGTTGATTTGC
GATGGGACGTTTTCCTAGGCACCTACTACTACTGGCGGCTCATTAAAGGC
GTGCCCCTGGTGGGCAGCGAGTCCATCCTCGAAGATGAACAGGCCCCTAC
GGATATTTTCTTCGTCCCGGGCCTACGCCGTCATCAACGTCGGCAGGCGC
GCTTGGCAGGGAAAGGGAAGACAGTGGGCGGCGCAGAGGCTGCCGGCATG
AATGGAGGGAAAGAGGGAGGGGGGGAGGGCGGGAGGGAGGAAGGTCTTCC
CGAGAAGAAAACCAGAGGCAGGAAGGTAGGGAGTGGGGCGGGAGGGAAGC
GGAAGGGCAAGAAGGAAGGAGGGGGGGAAGAGGGGGAGGAGGTGACAGGG
ACGTCGGCGAAGGTGGGAGGGACAACGGGCCCGAAGAAACGGGGCAGGAA
ACCCAAAGTGGTCGAGTAGTTTGTGGACCCGGAGATCTTGTCGGACGCGG
AGGTGCCGGACTTCGAAGCCCTCCAAAAGGAGGTCCCAGAGGCCATTCCC
TGGCGGGAACAGGACCATCGGGTCTTCTTCCGGTACTACCCCGAGCGCGT
GCAAACGCTGGAGTACTTTGGATGGAAGTGGTGGTGGCCAAGCATGGAGG
AGGGGGAGGAGCCCGAGGCCCCACAGGCATATAACCGCTACAACAATTTC
GAAGGCATGGACCTGGTGCTCAAACTCAAAGTGCCGTGGGGGTTCATCGT
GCCGGAGGAGGCGCCCTGGCCGTTTTTCTGCCGGGGGGTTGAGCTGGGGA
AAATGTGCGACATGATCCGGAGGCATCAGGAGCTCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTTCCCCCCGGCATGTAGGCCCCTGCTTCCCTC
CATAAGCCTTCTCACCCTTTTCCCTCCCTCCTCCTCGGTTTGCCGGCAGG
TTGATTTGCGATGGGACGTTTTCCTAGGCACCTACTACTACTGGCGGCTC
ATTAAAGGCGTGCCCCTGGTGGGCAGCGAGTCCATCCTCGAAGATGAACA
GGCCCCTACGGATATTTTCTTCGTCCCGGGCCTACGCCGTCATCAACGTC
GGCAGGCGCGCTTGGCAGGGAAAGGGAAGACAGTGGGCGGCGCAGAGGCT
GCCGGCATGAATGGAGGGAAAGAGGGAGGGGGGGAGGGCGGGAGGGAGGA
AGGTCTTCCCGAGAAGAAAACCAGAGGCAGGAAGGTAGGGAGTGGGGCGG
GAGGGAAGCGGAAGGGCAAGAAGGAAGGAGGGGGGGAAGAGGGGGAGGAG
GTGACAGGGACGTCGGCGAAGGTGGGAGGGACAACGGGCCCGAAGAAACG
GGGCAGGAAACCCAAAGTGGTCGAGTAGTTTGTGGACCCGGAGATCTTGT
CGGACGCGGAGGTGCCGGACTTCGAAGCCCTCCAAAAGGAGGTCCCAGAG
GCCATTCCCTGGCGGGAACAGGACCATCGGGTCTTCTTCCGGTACTACCC
CGAGCGCGTGCAAACGCTGGAGTACTTTGGATGGAAGTGGTGGTGGCCAA
GCATGGAGGAGGGGGAGGAGCCCGAGGCCCCACAGGCATATAACCGCTAC
AACAATTTCGAAGGCATGGACCTGGTGCTCAAACTCAAAGTGCCGTGGGG
GTTCATCGTGCCGGAGGAGGCGCCCTGGCCGTTTTTCTGCCGGGGGGTTG
AGCTGGGGAAAATGTGCGACATGATCCGGAGGCATCAGGAGCTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCGGCATGTAGGCCCCT
GCTTCCCTCCATAAGCCTTCTCACCCTTTTCCCTCCCTCCTCCTCGGTTT
GCCGGCAGGTTGATTTGCGATGGGACGTTTTCCTAGGCACCTACTACTAC
TGGCGGCTCATTAAAGGCGTGCCCCTGGTGGGCAGCGAGTCCATCCTCGA
AGATGAACAGGCCCCTACGGATATTTTCTTCGTCCCGGGCCTACGCCGTC
ATCAACGTCGGCAGGCGCGCTTGGCAGGGAAAGGGAAGACAGTGGGCGGC
GCAGAGGCTGCCGGCATGAATGGAGGGAAAGAGGGAGGGGGGGAGGGCGG
GAGGGAGGAAGGTCTTCCCGAGAAGAAAACCAGAGGCAGGAAGGTAGGGA
GTGGGGCGGGAGGGAAGCGGAAGGGCAAGAAGGAAGGAGGGGGGGAAGAG
GGGGAGGAGGTGACAGGGACGTCGGCGAAGGTGGGAGGGACAACGGGCCC
GAAGAAACGGGGCAGGAAACCCAAAGTGGTCGAGTAGTTTGTGGACCCGG
AGATCTTGTCGGACGCGGAGGTGCCGGACTTCGAAGCCCTCCAAAAGGAG
GTCCCAGAGGCCATTCCCTGGCGGGAACAGGACCATCGGGTCTTCTTCCG
GTACTACCCCGAGCGCGTGCAAACGCTGGAGTACTTTGGATGGAAGTGGT
GGTGGCCAAGCATGGAGGAGGGGGAGGAGCCCGAGGCCCCACAGGCATAT
AACCGCTACAACAATTTCGAAGGCATGGACCTGGTGCTCAAACTCAAAGT
GCCGTGGGGGTTCATCGTGCCGGAGGAGGCGCCCTGGCCGTTTTTCTGCC
GGGGGGTTGAGCTGGGGAAAATGTGCGACATGATCCGGAGGCATCAGGAG
CTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCGGCATG
TAGGCCCCTGCTTCCCTCCATAAGCCTTCTCACCCTTTTCCCTCCCTCCT
CCTCGGTTTGCCGGCAGGTTGATTTGCGATGGGACGTTTTCCTAGGCACC
TACTACTACTGGCGGCTCATTAAAGGCGTGCCCCTGGTGGGCAGCGAGTC
CATCCTCGAAGATGAACAGGCCCCTACGGATATTTTCTTCGTCCCGGGCC
TACGCCGTCATCAACGTCGGCAGGCGCGCTTGGCAGGGAAAGGGAAGACA
GTGGGCGGCGCAGAGGCTGCCGGCATGAATGGAGGGAAAGAGGGAGGGGG
GGAGGGCGGGAGGGAGGAAGGTCTTCCCGAGAAGAAAACCAGAGGCAGGA
AGGTAGGGAGTGGGGCGGGAGGGAAGCGGAAGGGCAAGAAGGAAGGAGGG
GGGGAAGAGGGGGAGGAGGTGACAGGGACGTCGGCGAAGGTGGGAGGGAC
AACGGGCCCGAAGAAACGGGGCAGGAAACCCAAAGTGGTCGAGTAGTTTG
TGGACCCGGAGATCTTGTCGGACGCGGAGGTGCCGGACTTCGAAGCCCTC
CAAAAGGAGGTCCCAGAGGCCATTCCCTGGCGGGAACAGGACCATCGGGT
CTTCTTCCGGTACTACCCCGAGCGCGTGCAAACGCTGGAGTACTTTGGAT
GGAAGTGGTGGTGGCCAAGCATGGAGGAGGGGGAGGAGCCCGAGGCCCCA
CAGGCATATAACCGCTACAACAATTTCGAAGGCATGGACCTGGTGCTCAA
ACTCAAAGTGCCGTGGGGGTTCATCGTGCCGGAGGAGGCGCCCTGGCCGT
TTTTCTGCCGGGGGGTTGAGCTGGGGAAAATGTGCGACATGATCCGGAGG
CATCAGGAGCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCC
CCCGGCATGTAGGCCCCTGCTTCCCTCCATAAGCCTTCTCACCCTTTTCC
CTCCCTCCTCCTCGGTTTGCCGGCAGGTTGATTTGCGATGGGACGTTTTC
CTAGGCACCTACTACTACTGGCGGCTCATTAAAGGCGTGCCCCTG back to top
|