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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100265g5.8298.mrna |
| Orig protein id | gnl|cribi|Naga_100265g5.8298 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:888488..889582 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5807 ID=rna5807|Name=rna5807|organism=Nannochloropsis gaditana|type=mRNA|length=1518bp
ATGTCTTTTTCATTTGGTGGAAGCAGCTCGGGGACAGGGACCAACGACCC
AAATGCTGGGGCACCTAAACCAGGTGCATTTAGTTTCTCCCAACCTGGCG
TTCCGACCCCTGCCTCTGGATTTAATGTGTCCAATGCAGGGACAGCGCCC
GCAACGCCTGGATTTGGAGGGTTTGGCAGCACGGTAAAGACCCCGGATAC
AAGCAATCGTGCGTCTACCGCGTTCGGTTCGACCTCCACGGGCGATGCCA
ACATCCCCAGCAAACCAGCATCCGCCGGCCTCTTTGGAGGAGGTAGCACG
ACTTTCAGCTCTCCTACCCCTTCCATCTCCGGTGCCGTTGCGCCTGCTAC
GGCCCCGGTTGGCGGGATTGTCGCAAACCCTTTCTCTATGGCTCCTGCAC
CCACACCGTCAAGCGGATTCGGCGCCCTTACAACCCCAAGTCCCTTCGCC
ACCACCTCGACCCCTGCACCTGCCCCCACCAGCAACGCTGTATTCGGGGG
CTCCACGCATGCCACGGGCACACCGGCCTCGAATGCCAACAACTTCGGCG
TGGGTGCCTCGACCACCTCGGCGTCCACAGGTGGAGGGTTTCAATTTGGA
AACCAAGCTGCCCCGGCACCGGCCCCGAGCACCACCTTCTCAACCCCTGC
GTCAAGCACGTCTGGATTCGGCTCAGGCTCCATGTTTGGGACTCGCCATG
CAACAGGCGCCCTACCCGCTTTCGGTGCATCCACTGGCACGACCCAGGCG
TCCGACCAAGCCCCGCCGTCTGCTGCAGCACCGCGAGCATCAACACCCGC
CCCCCCCCCTGCAAGCTCTTCCCTCTTTGGAAGCGCTCCTTCTGCAACGA
CCTCCCTACCCGGCAGCGCCTCGCTCTTCGGCAGCACAGTGTGGGGCTTG
GGGAAAAGCGTGGCGACGGACCCGGCGGTTTTTGAACGTGAGTTTGGGGC
GTATAAATTGAGTGAGCTGATCAAGCTCTTCCAAGGTGGGGTGGAGGACG
ATTTGGAGGTGTGCGAGGTGCAAAACGAAGCGGTTCGGGAGGGGGACGAA
AGGACTGCGACCGCCCAAGAGGTGACGCGGGTCCTGGACGCGGCGGTGGC
GGATTTGAGCGCTGCCTGGGGGGAATTGGACGCCGGCCTCAGCTATGTGG
AAGGAAAACAGGCGGCGTTGGAGACGGACATGGCGGGATTGGAGAAGTCC
CTGGCAGTCCTTCTGGAGGGAGACGTGGCTTTGGACGGCGCGGACCTGGA
GCGGATGGATTTGTATGATTTGCTGCAAGGGATGGACGCGGAGCTGAACA
TGTTGCTGCGACGTGTCACTCGGGAGGCGGGGCGGGTGGGAGGGATTTAT
GAGAGGCACATTTCCCCGCCGGACGCCGAAAACCCCATGGGAATTTTCTT
GCGATTGACCAACGACCACCAACATGCCTTGGAATGGCTGCAGCGGACCG
CGCGACAAGTGGAGGACGCGGCGATGCAGTGCGAGATGGAAATGACAGCG
ACAGGCACACAAAAGTAA back to topprotein sequence of rna5807 >rna5807-protein ID=rna5807-protein|Name=rna5807|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MVGLTKRKVQLGRRDFEGGGGTERSLGQNTETLQKQLYRHYNETSHLNVQ
WRHSLTRISLGLSAILTYRMYRQWGDTSTTNANTSSSWPSFLQMHGVEFL
GVISGLAIAHYIHSPLPLTGGSYVLPWSFYAAFLCACLEIFAFYRHVVSN
PEYTLHIDATLPVGALFFLFVWGADLMMGRSQREARLGLEASQRLGETVA
PHRMKRE back to topmRNA from alignment at CM002466.1:888488..889582+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5807 ID=rna5807|Name=rna5807|organism=Nannochloropsis gaditana|type=mRNA|length=1095bp|location=Sequence derived from alignment at CM002466.1:888488..889582+ (Nannochloropsis gaditana)
cggcgacgcgTACATACGCAGCGGGAGGCTAAAATACTACGTTGAACACA
TTTGCAATGTTGACCACCGTGTGCGCAACATTTTGGCCGGCACAATTTGA
AAAACTGCATACTTAAGCCACATCTCACCGCGGTATTGTGAACAGAAATC
GAACGCAGgggctccatctcctcccatctCACGGCCAACGGTCAACCCCC
CCCCTATCCCTATACCGTGTGTCGAGAGTCGACACCATTGCGCCCTCACG
AGAACTTTAAAATGGTGGGtttgacgaagaggaaggtgcaaCTGGGTCGT
CGAGATTttgaagggggtggggggacggAGCGGAGCCTTGGGCAGAATAC
AGAAACCTTGCAGAAGCAGCTCTATAGACACTACAACGAGACAAGCCACC
TGAACGTGCAATGGCGTGTAAGTGACCCGAAACCATCCTCGTCGCTGCGA
ATGAGAGATTGATGTAAGATTCTTATTTTTtcgtccccttttttccgGCA
GCACTCCCTCACGCGCATCTCCCTGGGCTTATCCGCAATCTTGACGTATC
GGATGTACCGTCAATGGGGAGATACATCGACGACAAATGCAAACACGTCG
TCTTCCTGGCCCAGTTTCCTACAGATGCATGGCGTTGAGTTTTTAGGCGT
CATATCCGGGCTGGCCATAGCCCATTACATCCattcgcccctcccactgA
CAGGAGGGTCCTATGTCCTTCCCTGGTCGTTTTATGCGGCTTTCCTCTGC
GCGTGTTTAGAAATCTTTGCTTTCTACCGGCACGTAGTCTCCAATCCAGA
ATACACTTTACACATAGACGCCACCTTGCCGGTGGGTGCTTTgtttttcc
tctttgtctGGGGTGCTGACCTGATGATGGGCCGCAGTCAACGGGAAGCG
AggctgggcttggaggctAGCCAGCGCCTGGGCGAGACCGTCGCTCCTCA
TCGAATGAAAAGGGAATAAATATTATGGACGTGGTAAAATGTGTGGGGTA
ACAGATCGGCATAGAAGAACAGGCACATTAAGTGATGCGCACAGCAATGT
TCAAGGCAGATTAAGTAATGCGCACAGCGATGTTCTTCCTTTGAG back to topCoding sequence (CDS) from alignment at CM002466.1:888488..889582+ >rna5807 ID=rna5807|Name=rna5807|organism=Nannochloropsis gaditana|type=CDS|length=1248bp|location=Sequence derived from alignment at CM002466.1:888488..889582+ (Nannochloropsis gaditana)
ATGGTGGGtttgacgaagaggaaggtgcaaCTGGGTCGTCGAGATTttga
agggggtggggggacggAGCGGAGCCTTGGGCAGAATACAGAAACCTTGC
AGAAGCAGCTCTATAGACACTACAACGAGACAAGCCACCTGAACGTGCAA
TGGCGTCACTCCCTCACGCGCATCTCCCTGGGCTTATCCGCAATCTTGAC
GTATCGGATGTACCGTCAATGGGGAGATACATCGACGACAAATGCAAACA
CGTCGTCTTCCTGGCCCAGTTTCCTACAGATGCATGGCGTTGAGTTTTTA
GGCGTCATATCCGGGCTGGCCATAGCCCATTACATCCattcgcccctccc
actgACAGGAGGGTCCTATGTCCTTCCCTGGTCGTTTTATGCGGCTTTCC
TCTGCGCGTGTTTAGAAATCTTTGCTTTCTACCGGCACGTAGTCTCCAAT
CCAGAATACACTTTACACATAGACGCCACCTTGCCGGTGGGTGCTTTgtt
tttcctctttgtctGGGGTGCTGACCTGATGATGGGCCGCAGTCAACGGG
AAGCGAggctgggcttggaggctAGCCAGCGCCTGGGCGAGACCGTCGCT
CCTCATCGAATGAAAAGGGAATAAATGGTGGGtttgacgaagaggaaggt
gcaaCTGGGTCGTCGAGATTttgaagggggtggggggacggAGCGGAGCC
TTGGGCAGAATACAGAAACCTTGCAGAAGCAGCTCTATAGACACTACAAC
GAGACAAGCCACCTGAACGTGCAATGGCGTCACTCCCTCACGCGCATCTC
CCTGGGCTTATCCGCAATCTTGACGTATCGGATGTACCGTCAATGGGGAG
ATACATCGACGACAAATGCAAACACGTCGTCTTCCTGGCCCAGTTTCCTA
CAGATGCATGGCGTTGAGTTTTTAGGCGTCATATCCGGGCTGGCCATAGC
CCATTACATCCattcgcccctcccactgACAGGAGGGTCCTATGTCCTTC
CCTGGTCGTTTTATGCGGCTTTCCTCTGCGCGTGTTTAGAAATCTTTGCT
TTCTACCGGCACGTAGTCTCCAATCCAGAATACACTTTACACATAGACGC
CACCTTGCCGGTGGGTGCTTTgtttttcctctttgtctGGGGTGCTGACC
TGATGATGGGCCGCAGTCAACGGGAAGCGAggctgggcttggaggctAGC
CAGCGCCTGGGCGAGACCGTCGCTCCTCATCGAATGAAAAGGGAATAA back to top
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