rna5803, rna5803 (mRNA) Nannochloropsis gaditana

Overview
Namerna5803
Unique Namerna5803
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length762
Alignment locationCM002466.1:876637..877754 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100265g10.8305.mrna
Orig protein idgnl|cribi|Naga_100265g10.8305
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:876637..877754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100265g10gene5603Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5803rna5803-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24885.1cds5788Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5803 ID=rna5803|Name=rna5803|organism=Nannochloropsis gaditana|type=mRNA|length=762bp
ATGGGCCTTGTCTCCCTCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCC
GCACCACGTGCTCGAGTCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCA
AAGTCATGGTGCCTCGGTTTGTCAAGATTCTGGCGAAGGACTACGAAGTG
TGGAGTTCCGGCGACGACTCGAGGGCTGCTGTTGCACAGGACTTGGAGGA
GAAGCTGAAGACGCCGAAACTAAAGGAGGCGGGGAAGGAGGAGGAGGCAA
GATCCTCGTTTTGGGTGCTAGGGCCCGGGGGCGCCGGGGACGGGGCGGCC
ATTCGTGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGC
GTTTGGAAGGGAGACCTTGGGGCCCTGCGTTTGGAAGGGAGACCTTGGGG
GCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACC
TTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGG
GAGTGGATGGAATGTTGAAGGCTGGATGTACGATATATCAAGGGCTGAGG
AGGCTTTGGGGGGCTTGTACCAGGCAGGAGAGACAGTGGAGAAGGGGGAT
AGCCGGGTGGCGGGAGATAATAATACCACCAAGGCTTTGCAACTAAAAGC
CATCGAAACGACAGAACGATACCTAAGCTCTCTAAATCGGAGAGTGACCG
GAACCCGCAAGAAGCTCTTAAGCCTCCTTCTGCTTGCCGGACGTCTACCT
CTTCCTACATGA
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protein sequence of rna5803

>rna5803-protein ID=rna5803-protein|Name=rna5803|organism=Nannochloropsis gaditana|type=polypeptide|length=237bp
MQHSTTWSACTAHATQKYSSQRRGRQKARLDRSCCSLLIFVAFCAPAPSE
AFQIFPCIPYTAPAQLKTSRHTVPEHSLSRRMASSLLLRHWINPSRTSET
ATPTASPTTSPPPSSPSAPSAVKLPSADATNLTYDRKIVGKEVMFKASKS
AECEVVRMDGTSHRRVGVKGGRSRCFMRVGARDSCPYPPLDLTLVFHPCL
FLALTLTFRRKACAPSKTTWPSRPPSTLCSTPTPSSA
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mRNA from alignment at CM002466.1:876637..877754-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5803 ID=rna5803|Name=rna5803|organism=Nannochloropsis gaditana|type=mRNA|length=1118bp|location=Sequence derived from alignment at CM002466.1:876637..877754- (Nannochloropsis gaditana)
GCCTAAACAAACCACCGCAAGGGCTGCAACTTTGTCTTTCTGGTCACGGA
TGTCACCTGTCGAAGTTGTCTTTCATGCCAGGCTTGCTCACTCATATTTT
GACTCGACGATCGTACAGCAGGGCTTGATCGGGCTTGGTCACGTAGACTG
TTCTTTCCACAGGACTCGTATTCCTGCAAGTCGGCTTTTTGACCCGCTTG
AGTGGATTTTGGGTCCCACTTGCTCCCCCTTGAGTACCATTCAGGACACA
CAATATTAAATATGCAGCACAGCACCACCTGGAGCGCTTGCACGGCACAT
GCGACACAAAAATATTCCTCCCAACGCCGAGGCCGCCAGAAGGCTCGGTT
AGATCGTTCCTGCTGCTCTCTGCTCATCTTCGTCGCATTTTGCGCCCCTG
CGCCCTCCGAGGCCTTCCAAATCTTCCCATGCATCCCTTACACTGCACCA
GCGCAGCTGAAAACGTCCCGTCACACAGTTCCAGAGCATTCGTTGAGCAG
AAGAATGGTACGCGTCAGGGCAGGCTACTACCCTTCGGGTGCTTGAGACG
CTCCCACTTCGGGCTTCTCCACTGATACGGTACCCCTTTCTTCTCACTGT
CCAGGCCTCCTCCCTGCTTCTCCGTCATTGGATAAACCCCTCAAGGACAT
CGGAGACGGCCACGCCCACCGCCTCTCCGACTACTTCCCCGCCTCCCTCC
TCCCCGTCTGCCCCTTCCGCGGTGAAGCTGCCCTCGGCAGATGCCACCAA
CCTGACCTACGACCGTAAGATTGTTGGAAAAGAAGTCATGTTCAAGGCGT
CCAAGAGCGCGGAGTGCGAAGTGGTACGCATGGACGGCACAAGCCACCGA
CGGGTTGGGGTAAAGGGCGGTCGGTCACGATGCTTTATGCGTGTGGGCGC
CCGTGACTCTTGTCCCTACCCTCCCCTTGATTTAACCTTAGTTTTCCATC
CTTGCCTATTCCTTGCATTGACATTGACATTCAGGAGGAAGGCATGCGCG
CCCTCAAAGACTACATGGCCCTCCCGCCCTCCCAGTACTCTGTGCTCGAC
GCCGACGCCATCGTCCGCTTGAGCGAAGACTCCTTTCGGTGAGGAGAGAA
GGGGAAGGAAGGGAAAGG
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Coding sequence (CDS) from alignment at CM002466.1:876637..877754-

>rna5803 ID=rna5803|Name=rna5803|organism=Nannochloropsis gaditana|type=CDS|length=1428bp|location=Sequence derived from alignment at CM002466.1:876637..877754- (Nannochloropsis gaditana)
GCCTCCTCCCTGCTTCTCCGTCATTGGATAAACCCCTCAAGGACATCGGA
GACGGCCACGCCCACCGCCTCTCCGACTACTTCCCCGCCTCCCTCCTCCC
CGTCTGCCCCTTCCGCGGTGAAGCTGCCCTCGGCAGATGCCACCAACCTG
ACCTACGACCGTAAGATTGTTGGAAAAGAAGTCATGTTCAAGGCGTCCAA
GAGCGCGGAGTGCGAAGTGGTACGCATGGACGGCACAAGCCACCGACGGG
TTGGGGTAAAGGGCGGTCGGTCACGATGCTTTATGCGTGTGGGCGCCCGT
GACTCTTGTCCCTACCCTCCCCTTGATTTAACCTTAGTTTTCCATCCTTG
CCTATTCCTTGCATTGACATTGACATTCAGGAGGAAGGCATGCGCGCCCT
CAAAGACTACATGGCCCTCCCGCCCTCCCAGTACTCTGTGCTCGACGCCG
ACGCCATCGTCCGCTTGAATGCAGCACAGCACCACCTGGAGCGCTTGCAC
GGCACATGCGACACAAAAATATTCCTCCCAACGCCGAGGCCGCCAGAAGG
CTCGGTTAGATCGTTCCTGCTGCTCTCTGCTCATCTTCGTCGCATTTTGC
GCCCCTGCGCCCTCCGAGGCCTTCCAAATCTTCCCATGCATCCCTTACAC
TGCACCAGCGCAGCTGAAAACGTCCCGTCACACAGTTCCAGAGCATTCGT
TGAGCAGAAGAATGGCCTCCTCCCTGCTTCTCCGTCATTGGATAAACCCC
TCAAGGACATCGGAGACGGCCACGCCCACCGCCTCTCCGACTACTTCCCC
GCCTCCCTCCTCCCCGTCTGCCCCTTCCGCGGTGAAGCTGCCCTCGGCAG
ATGCCACCAACCTGACCTACGACCGTAAGATTGTTGGAAAAGAAGTCATG
TTCAAGGCGTCCAAGAGCGCGGAGTGCGAAGTGGTACGCATGGACGGCAC
AAGCCACCGACGGGTTGGGGTAAAGGGCGGTCGGTCACGATGCTTTATGC
GTGTGGGCGCCCGTGACTCTTGTCCCTACCCTCCCCTTGATTTAACCTTA
GTTTTCCATCCTTGCCTATTCCTTGCATTGACATTGACATTCAGGAGGAA
GGCATGCGCGCCCTCAAAGACTACATGGCCCTCCCGCCCTCCCAGTACTC
TGTGCTCGACGCCGACGCCATCGTCCGCTTGAATGCAGCACAGCACCACC
TGGAGCGCTTGCACGGCACATGCGACACAAAAATATTCCTCCCAACGCCG
AGGCCGCCAGAAGGCTCGGTTAGATCGTTCCTGCTGCTCTCTGCTCATCT
TCGTCGCATTTTGCGCCCCTGCGCCCTCCGAGGCCTTCCAAATCTTCCCA
TGCATCCCTTACACTGCACCAGCGCAGCTGAAAACGTCCCGTCACACAGT
TCCAGAGCATTCGTTGAGCAGAAGAATG
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Synonyms
Publications