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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100116g1.9023.mrna |
| Orig protein id | gnl|cribi|Naga_100116g1.9023 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:874595..875986 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5802 ID=rna5802|Name=rna5802|organism=Nannochloropsis gaditana|type=mRNA|length=974bp
TCGATAGGCGAATGCAAAAGTTTATGGGACGATGGTGAGGGAACTTGATG
AAAAATGATGGGGATATGGAGAAGGTGGAAAATATGAACCCACTGGTCTA
CTATCTCGACAGTTCTTGGCTGATTGCCTGGTCTGTCATGCCTTTCCATG
CGGTCCTTCTTTCATCTGCCTCAGGTAGCGACTCGATGCAAAGCAAAGGC
GAATGATACATGTCATCAATCTCGCCTTAAACAGGTACCATGTCAAGTGA
AGGTCCTCCAGCTCCACCTCCGCCTCCATCGAATGAGATTGTAGATATTA
CAGATAAAATTGCCAAGCCTGAGTGCTTCGTGCTGAATGCGGACCCTAAG
TACCCATGGGAAAATTTATTCATGGGCGATGACCGCCTCCAACTTCGATC
GGACACAGATGAACAGTTAATTTTGCACCTTGTATTTTCCGAGGCCGTTA
AAGTCCACAGCCTCAATCTGGTCGCTCCGGAGATGGAGGCCGCGCCTGCC
ACTGTAAAGCTGTACCTGAATAAGACTTCTTTCTCGTTCGACGACGCTGA
AAACATTGAGCCCACGCAAGTGCTAGAATTGACGGAAGAGGACTACAAGG
CAGAAAAGGTCACTCTATTAAAATTTGTCAAGTTCCAACGGGTCTCGTCC
TTGACCATTTTCGTGGAGAACAACAACGGCGCGGACTACACGGCCCTCTC
CATGCTGCGTCTCTTCGGCACCCCGTTGCAGGGCACCGATGTATCCAAGA
TCCAGAAACAACCGGCCCAAGGGTAGTGGAGTCTCGCCATATGCCTCTTT
CTCGCGATGCACGGAGGAGAATAATCATGTAGGAAGAGGTCTGGGGACGT
AGGGAGGGAGCCAATGGGATGGGAAAGGGAGGAATGGATCACGCACCCCC
CTGGTCTTCCTGGCGTCGCCGAGGAGGATGTTCGATAGGAGGCGACGAGG
GAGAAATCCGGGTACTTCTACTTG back to topprotein sequence of rna5802 >rna5802-protein ID=rna5802-protein|Name=rna5802|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MGLVSLPPQVPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEV
WSSGDDSRAAVAQDLEEKLKTPKLKEAGKEEEARSSFWVLGPGGAGDGAA
IRDLGGLRLEGRPWGPAFGRETLGPCVWKGDLGGLRLEGRPWGPAFGRET
LGACVWKGDLGGLRLEGSGWNVEGWMYDISRAEEALGGLYQAGETVEKGD
SRVAGDNNTTKALQLKAIETTERYLSSLNRRVTGTRKKLLSLLLLAGRLP
LPT back to topmRNA from alignment at CM002466.1:874595..875986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5802 ID=rna5802|Name=rna5802|organism=Nannochloropsis gaditana|type=mRNA|length=1392bp|location=Sequence derived from alignment at CM002466.1:874595..875986- (Nannochloropsis gaditana)
ATGGGCCTTGTCTCCCTCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCC
GCACCACGTGCTCGAGTCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCA
AAGTCATGGTGCCTCGGTTTGTCAAGGTGAAGGAGAGGGGGAGGAGGAGG
AAGAGGGGGAAGGAAGGGAGAGAGGGAGCGAGTGCGTGTGGGGAGGTCAG
GGGCAGAGACCCACTCTGAGTCATGGTAAACGATTTTACAACGATCGGCA
TGTCGCTCTCCACATTATTTTTGGGTTTTGAACTTCCGGCACGTTCTTAA
TTCAGATTCTGGCGAAGGACTACGAAGTGTGGAGTTCCGGCGACGACTCG
AGGGCTGCTGTTGCACAGGTAGGTGGGGAGGGAGACACGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGGACGGACGGGGATGTACCCGGACAAGAAAGCC
AAGCTCGCGTGGAATATGGATCGGATGGGGAGAGGCAAAGCAGTGAGGTT
AAGGAAGGTATGACGAGCCCGTGCACATCTATATGACCGCCATAGGACTT
GGAGGAGAAGCTGAAGACGCCGAAACTGTAAAGCACGTCAAAGGATGAGT
GGAACAGGGCCTAGAGCGGCAGAAGGGGAAAGGAAGAAAGGAGGCGGGGA
AGGAGGAGGAGGCAAGATCCTCGTTTTGGGTGCTAGGGCCCGGGGGCGCC
GGGGACGGGGCGGCCATTCGTGACCTTGGGGGCCTGCGTTTGGAAGGGAG
ACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGCCCTGCGTTTGGA
AGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCG
TTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGG
CCTGCGTTTGGAAGGGAGTGGATGGAATGTTGAAGGCTGGATGTACGATA
TATCAAGGGCTGAGGAGGCTTTGGGGGGCTTGTACCAGGCAGGAGAGACA
GTGGAGAAGGGGGATAGCCGGGTGGCGGGAGGTAGAGGGAGAGCGGAGCG
TCCAGAAGGACGGAGGACGGAGATGGAATAAATGTGAACGATTGAGATAA
TAATACCACCAAGGCTTTGCAACTAAAAGCCATCGAAACGACAGAACGAT
ACCTAAGCTCTCTAAATCGGAGAGTGACCGGAACCCGCAAGAAGCTCTTA
AGCCTCCTTCTGCTTGCCGGACGTCTGTTTTTTTTTCTTTTTCAAGTAGA
AGTACCCGGATTTCTCCCTCGTCGCCTCCTATCGAACATCCTCCTCGGCG
ACGCCAGGAAGACCAGGGGGGTGCGTGATCCATTCCTCCCTTTCCCATCC
CATTGGCTCCCTCCCTACGTCCCCAGACCTCTTCCTACATGA back to topCoding sequence (CDS) from alignment at CM002466.1:874595..875986- >rna5802 ID=rna5802|Name=rna5802|organism=Nannochloropsis gaditana|type=CDS|length=4572bp|location=Sequence derived from alignment at CM002466.1:874595..875986- (Nannochloropsis gaditana)
ACCTCTTCCTACATGAATAATAATACCACCAAGGCTTTGCAACTAAAAGC
CATCGAAACGACAGAACGATACCTAAGCTCTCTAAATCGGAGAGTGACCG
GAACCCGCAAGAAGCTCTTAAGCCTCCTTCTGCTTGCCGGACGTCTAAAG
GAGGCGGGGAAGGAGGAGGAGGCAAGATCCTCGTTTTGGGTGCTAGGGCC
CGGGGGCGCCGGGGACGGGGCGGCCATTCGTGACCTTGGGGGCCTGCGTT
TGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGCCC
TGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTG
GGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAG
ACCTTGGGGGCCTGCGTTTGGAAGGGAGTGGATGGAATGTTGAAGGCTGG
ATGTACGATATATCAAGGGCTGAGGAGGCTTTGGGGGGCTTGTACCAGGC
AGGAGAGACAGTGGAGAAGGGGGATAGCCGGGTGGCGGGAGGACTTGGAG
GAGAAGCTGAAGACGCCGAAACTATTCTGGCGAAGGACTACGAAGTGTGG
AGTTCCGGCGACGACTCGAGGGCTGCTGTTGCACAGATGGGCCTTGTCTC
CCTCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCCGCACCACGTGCTCG
AGTCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCAAAGTCATGGTGCCT
CGGTTTGTCAAGACCTCTTCCTACATGAATAATAATACCACCAAGGCTTT
GCAACTAAAAGCCATCGAAACGACAGAACGATACCTAAGCTCTCTAAATC
GGAGAGTGACCGGAACCCGCAAGAAGCTCTTAAGCCTCCTTCTGCTTGCC
GGACGTCTAAAGGAGGCGGGGAAGGAGGAGGAGGCAAGATCCTCGTTTTG
GGTGCTAGGGCCCGGGGGCGCCGGGGACGGGGCGGCCATTCGTGACCTTG
GGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAG
ACCTTGGGGCCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGA
AGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCG
TTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGTGGATGGAAT
GTTGAAGGCTGGATGTACGATATATCAAGGGCTGAGGAGGCTTTGGGGGG
CTTGTACCAGGCAGGAGAGACAGTGGAGAAGGGGGATAGCCGGGTGGCGG
GAGGACTTGGAGGAGAAGCTGAAGACGCCGAAACTATTCTGGCGAAGGAC
TACGAAGTGTGGAGTTCCGGCGACGACTCGAGGGCTGCTGTTGCACAGAT
GGGCCTTGTCTCCCTCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCCGC
ACCACGTGCTCGAGTCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCAAA
GTCATGGTGCCTCGGTTTGTCAAGACCTCTTCCTACATGAATAATAATAC
CACCAAGGCTTTGCAACTAAAAGCCATCGAAACGACAGAACGATACCTAA
GCTCTCTAAATCGGAGAGTGACCGGAACCCGCAAGAAGCTCTTAAGCCTC
CTTCTGCTTGCCGGACGTCTAAAGGAGGCGGGGAAGGAGGAGGAGGCAAG
ATCCTCGTTTTGGGTGCTAGGGCCCGGGGGCGCCGGGGACGGGGCGGCCA
TTCGTGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCG
TTTGGAAGGGAGACCTTGGGGCCCTGCGTTTGGAAGGGAGACCTTGGGGG
CCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCT
TGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGG
AGTGGATGGAATGTTGAAGGCTGGATGTACGATATATCAAGGGCTGAGGA
GGCTTTGGGGGGCTTGTACCAGGCAGGAGAGACAGTGGAGAAGGGGGATA
GCCGGGTGGCGGGAGGACTTGGAGGAGAAGCTGAAGACGCCGAAACTATT
CTGGCGAAGGACTACGAAGTGTGGAGTTCCGGCGACGACTCGAGGGCTGC
TGTTGCACAGATGGGCCTTGTCTCCCTCCCTCCCCAGGTCCCCCGGGGGA
ACGTGATTCCGCACCACGTGCTCGAGTCGGGGGGCTCTTTGGTCATCCAG
GGCATCCTCAAAGTCATGGTGCCTCGGTTTGTCAAGACCTCTTCCTACAT
GAATAATAATACCACCAAGGCTTTGCAACTAAAAGCCATCGAAACGACAG
AACGATACCTAAGCTCTCTAAATCGGAGAGTGACCGGAACCCGCAAGAAG
CTCTTAAGCCTCCTTCTGCTTGCCGGACGTCTAAAGGAGGCGGGGAAGGA
GGAGGAGGCAAGATCCTCGTTTTGGGTGCTAGGGCCCGGGGGCGCCGGGG
ACGGGGCGGCCATTCGTGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCT
TGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGCCCTGCGTTTGGAAGGG
AGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTG
GAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTG
CGTTTGGAAGGGAGTGGATGGAATGTTGAAGGCTGGATGTACGATATATC
AAGGGCTGAGGAGGCTTTGGGGGGCTTGTACCAGGCAGGAGAGACAGTGG
AGAAGGGGGATAGCCGGGTGGCGGGAGGACTTGGAGGAGAAGCTGAAGAC
GCCGAAACTATTCTGGCGAAGGACTACGAAGTGTGGAGTTCCGGCGACGA
CTCGAGGGCTGCTGTTGCACAGATGGGCCTTGTCTCCCTCCCTCCCCAGG
TCCCCCGGGGGAACGTGATTCCGCACCACGTGCTCGAGTCGGGGGGCTCT
TTGGTCATCCAGGGCATCCTCAAAGTCATGGTGCCTCGGTTTGTCAAGAC
CTCTTCCTACATGAATAATAATACCACCAAGGCTTTGCAACTAAAAGCCA
TCGAAACGACAGAACGATACCTAAGCTCTCTAAATCGGAGAGTGACCGGA
ACCCGCAAGAAGCTCTTAAGCCTCCTTCTGCTTGCCGGACGTCTAAAGGA
GGCGGGGAAGGAGGAGGAGGCAAGATCCTCGTTTTGGGTGCTAGGGCCCG
GGGGCGCCGGGGACGGGGCGGCCATTCGTGACCTTGGGGGCCTGCGTTTG
GAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGCCCTG
CGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGG
GGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGAC
CTTGGGGGCCTGCGTTTGGAAGGGAGTGGATGGAATGTTGAAGGCTGGAT
GTACGATATATCAAGGGCTGAGGAGGCTTTGGGGGGCTTGTACCAGGCAG
GAGAGACAGTGGAGAAGGGGGATAGCCGGGTGGCGGGAGGACTTGGAGGA
GAAGCTGAAGACGCCGAAACTATTCTGGCGAAGGACTACGAAGTGTGGAG
TTCCGGCGACGACTCGAGGGCTGCTGTTGCACAGATGGGCCTTGTCTCCC
TCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCCGCACCACGTGCTCGAG
TCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCAAAGTCATGGTGCCTCG
GTTTGTCAAGACCTCTTCCTACATGAATAATAATACCACCAAGGCTTTGC
AACTAAAAGCCATCGAAACGACAGAACGATACCTAAGCTCTCTAAATCGG
AGAGTGACCGGAACCCGCAAGAAGCTCTTAAGCCTCCTTCTGCTTGCCGG
ACGTCTAAAGGAGGCGGGGAAGGAGGAGGAGGCAAGATCCTCGTTTTGGG
TGCTAGGGCCCGGGGGCGCCGGGGACGGGGCGGCCATTCGTGACCTTGGG
GGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGAC
CTTGGGGCCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAG
GGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGACCTTGGGGGCCTGCGTT
TGGAAGGGAGACCTTGGGGGCCTGCGTTTGGAAGGGAGTGGATGGAATGT
TGAAGGCTGGATGTACGATATATCAAGGGCTGAGGAGGCTTTGGGGGGCT
TGTACCAGGCAGGAGAGACAGTGGAGAAGGGGGATAGCCGGGTGGCGGGA
GGACTTGGAGGAGAAGCTGAAGACGCCGAAACTATTCTGGCGAAGGACTA
CGAAGTGTGGAGTTCCGGCGACGACTCGAGGGCTGCTGTTGCACAGATGG
GCCTTGTCTCCCTCCCTCCCCAGGTCCCCCGGGGGAACGTGATTCCGCAC
CACGTGCTCGAGTCGGGGGGCTCTTTGGTCATCCAGGGCATCCTCAAAGT
CATGGTGCCTCGGTTTGTCAAG back to top
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