EWM24895.1, cds5787 (CDS) Nannochloropsis gaditana

Overview
NameEWM24895.1
Unique Namecds5787
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:875861..875986 -
Alignment locationCM002466.1:875619..875681 -
Alignment locationCM002466.1:875410..875441 -
Alignment locationCM002466.1:874956..875350 -
Alignment locationCM002466.1:874761..874890 -
Alignment locationCM002466.1:874595..874610 -

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Properties
Property NameValue
Protein idEWM24895.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100116g1.9023.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:875861..875986 -
CM002466.1supercontigCM002466.1:875619..875681 -
CM002466.1supercontigCM002466.1:875410..875441 -
CM002466.1supercontigCM002466.1:874956..875350 -
CM002466.1supercontigCM002466.1:874761..874890 -
CM002466.1supercontigCM002466.1:874595..874610 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM24895.1 vs. NCBI_GenBank
Match: gi|585106522|gb|EWM24895.1| (hypothetical protein Naga_100116g1 [Nannochloropsis gaditana])

HSP 1 Score: 498.819 bits (1283), Expect = 2.864e-178
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MGLVSLPPQVPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAVAQDLEEKLKTPKLKEAGKEEEARSSFWVLGPGGAGDGAAIRDLGGLRLEGRPWGPAFGRETLGPCVWKGDLGGLRLEGRPWGPAFGRETLGACVWKGDLGGLRLEGSGWNVEGWMYDISRAEEALGGLYQAGETVEKGDSRVAGDNNTTKALQLKAIETTERYLSSLNRRVTGTRKKLLSLLLLAGRLPLPT 253
            MGLVSLPPQVPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAVAQDLEEKLKTPKLKEAGKEEEARSSFWVLGPGGAGDGAAIRDLGGLRLEGRPWGPAFGRETLGPCVWKGDLGGLRLEGRPWGPAFGRETLGACVWKGDLGGLRLEGSGWNVEGWMYDISRAEEALGGLYQAGETVEKGDSRVAGDNNTTKALQLKAIETTERYLSSLNRRVTGTRKKLLSLLLLAGRLPLPT
Sbjct:    1 MGLVSLPPQVPRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAVAQDLEEKLKTPKLKEAGKEEEARSSFWVLGPGGAGDGAAIRDLGGLRLEGRPWGPAFGRETLGPCVWKGDLGGLRLEGRPWGPAFGRETLGACVWKGDLGGLRLEGSGWNVEGWMYDISRAEEALGGLYQAGETVEKGDSRVAGDNNTTKALQLKAIETTERYLSSLNRRVTGTRKKLLSLLLLAGRLPLPT 253          
BLAST of EWM24895.1 vs. NCBI_GenBank
Match: gi|1175830751|ref|XP_020588909.1| (uncharacterized protein LOC110030507 isoform X1 [Phalaenopsis equestris])

HSP 1 Score: 59.3066 bits (142), Expect = 5.442e-7
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = 0
Query:   16 IPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSRAAV 61
            IP + +ES G+ V++ IL++M+PRF+  L KDY+ W+SGDDSR A+
Sbjct:  178 IPVNAIESAGTQVLEQILRIMLPRFLNQLVKDYQAWASGDDSRKAL 223          
BLAST of EWM24895.1 vs. NCBI_GenBank
Match: gi|527202363|gb|EPS69171.1| (hypothetical protein M569_05597, partial [Genlisea aurea])

HSP 1 Score: 59.3066 bits (142), Expect = 6.161e-7
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   11 PRGNVIPHHVLESGGSLVIQGILKVMVPRFVKILAKDYEVWSSGDDSR 58
            P   VIP  V+ES GS V+ G+LK M+PRF+  L KDYE W++GD SR
Sbjct:  182 PAFRVIPPRVIESTGSQVLGGVLKAMLPRFMSQLVKDYEAWATGDTSR 229          
The following BLAST results are available for this feature:
BLAST of EWM24895.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585106522|gb|EWM24895.1|2.864e-178100.00hypothetical protein Naga_100116g1 [Nannochloropsi... [more]
gi|1175830751|ref|XP_020588909.1|5.442e-752.17uncharacterized protein LOC110030507 isoform X1 [P... [more]
gi|527202363|gb|EPS69171.1|6.161e-756.25hypothetical protein M569_05597, partial [Genlisea... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5802rna5802Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications