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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF82 |
| Orig transcript id | gnl|cribi|Naga_100116g8.9035.mrna |
| Orig protein id | gnl|cribi|Naga_100116g8.9035 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:855068..857796 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5793 ID=rna5793|Name=rna5793|organism=Nannochloropsis gaditana|type=mRNA|length=2411bp
GATTGTGATGGAATATGCCCTTTCGATTTTACACTTTCTGGGGCGGTAAA
TGCTCGTCTCTAGCACGTGCCTTTTGGGAAACTTGGTCTTGTAGGGATCA
TATGCGTCATAAATAATGGAAGGACGACAAAATAGGGTGCACTTTGCCTG
AATTTAAGCGTGCACGACCTGTTGCTTGTTGAGTTAGCCTGTTCGTAATC
CTATTGAAGGTATTTACTTTGGGAAAAACGATGGAGCGTGATGCCCGCGT
CATTTTTTTGATGAATAGATTTCTAAGATAGCATTTTTGGAGCTATCGGG
CGTAGCAAGACTGAATGGATTCGGCAAATGTCGCGAACTGAAAACTAATG
GTAAAATCGTGTGGAGCTTCAACCCTGATCCTGTAATTTCGATTTCTTCC
TCATCTGTGACTTGTCACGTATGGTGTCAACTTTAGGCTCATCCTTTCTT
TGGCTTTCAATATTCAGAAGGAGTCAGTTATGTCTCCCCGCGCGGAAGGC
AAGGCAGAATTTCTTCTTATCCGGAAGACCCTCATCCCCCCAGCCACTCC
TGCCCCCCCTGGACCTGCCCCACGCGTCCCGCTGGCGGGTTGCGATGCGA
TCTACGACCATTTTCAAGTCAAGGCGGCCTTCTTTTTCAATGAGCCTTTG
AACCCCACATTGTTGAAAGTCAGCTTGGCCAAGGCATTGGATGCCTACCC
CCTTCTCGCTGGCCGTGCCCGCCAGGGGAGCAACAGGGACGCGTGGATCG
ATTGTTGCGGCTCAGGGGTGCAAGTCATAGAGCAAATTGCACGGGTGACA
GGCAAGGGAGGGTTACACCATGGAGACACCCTAGCATTCATGCCCCGGCT
TGCACGGGGAGGGTTCAAGACTGCTGTGAACAATGCCGCCTCTCCCATCC
TCACCGTCACTCTTACCGAGGTCACGTACGGAGAATCCTTCTCGTGCGGT
CCACGACTCTTGTCGGCATGCTCGTGTCGATGCAATGGGGAGGACGAATG
GGAGCAGGAAGCGGCGGGGACGGAGGGGGCCGGGGGTGGGGACGTGGAAC
GCCGTCCACCATCCCCTTCGGGAACCCCAGGCGGGACCGACGGTGAGAAC
TCACTCCGCCCCACCTTTCACGCCTCCAGCACTACACCTGTCCCTGCGTC
TACCCCTGCGGCTCCCAACCCCGGGCCCGTTATCCAGTACGCTTTGGGCT
TGTCCTGCTCCCACTCGGTCGGGGACGGGAGCACCATCGCCCATTTCCTC
GGCGCCTGGTCGCGAGCCAGTACCCATCTCCCCATCCAGCCCGCGTTGAA
TAACCGGGACCTTCTCTTAGATCCCGGCCCCTGGGGGGAAGCACGTCTGC
CGCCGCCGGCAAAATTCCGCGAAGTCTCGACATGGACCAAAGCCCGTATC
TTGTGGCGTTTTGCCTGGCAGCAGGGCGGATGCGAGACGGTCATCCTGCG
ATTCGACAAGTCGGAGGTGGAGGAAATCAAGAGGCAGGCGATGAAACGCT
TGCATGGGACGGAGCAATGGGTGTCTACCTCGAACGCGTTGGCGGCACAT
CTGTGGCCCATCGTCTCGGCGCTCTGGTCGCGGCAGGGGGAAAGCGAGGG
AGGGCGGGAGTCGGATGGGCTGGTCCCGATGAGCATCGTGGTGAATTCCC
GGAAGCACTTAAAGGTACCCGGACATTATTGTGGAAACGTGGTGTCAATC
CAGGACGTGCCTGCCTGCGAGGCCTCCGAGGACTTGACCTCCCGGGCGTT
GAAGATCCGTTACGCCTCGGCGTGCTCGGAAGAAGAAGCATGGCAAGACC
ACCACTACATGCAATGGATGCACAGCCGGGGTCGGGCAGGGAAAATCCTG
TACACGCGGATGAAAGACATGATCGAGGGGAAGCCGGGTATCCTTTGGGA
CGACATTTCTTCTTTTCAATCGGGTGCCATGGTCCACTTGAAGTTTGGCA
AGGCAGTGCCTATGGGCGCGGATTTGCTGGTTCTTCCCATTCCAGGAACC
ATGTTTGTGGTCGCCCCCCCCGCCACGAGGGGACAAGGGGAAGGTGGAAA
GGAAGTGCGCGTGGCGTTAACAGCCAAAATGGCGCGAAAATTGAGAAGCA
GCGAGTGGCAAGGGAAGGTGCATCGGTATCGACCATGGCCGATGGCACAT
GCGTCGTCGGCGATGGAAGCCAAAGGGGGAGGCGGGGAGGGAGAAGAGGC
ACGATTGGAAGAAGGAGGGGAGGAGACAAAATTTGAGGAGAAGGAGGAGG
TACTGGACGGGGAGAAGAAAGAAGAGGAAGGTAGGGAAGGGGTAACGGCA
GGTCAGGAAGAGAAGGTAGCCAACGAGGTGTCTTAACGGGGACGAACCGA
AGTGCTTTCAAAAGGAGAGGACTCATGCTCAACAAAAAGAGTACATGTGC
GCCGCGATGTG back to topprotein sequence of rna5793 >rna5793-protein ID=rna5793-protein|Name=rna5793|organism=Nannochloropsis gaditana|type=polypeptide|length=655bp
MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERES
KGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIET
YVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVA
LMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVT
CTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIP
PVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAP
NKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAV
CSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDV
EFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLT
RDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRC
SGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEM
WNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEE
EEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHT
LHTTS back to topmRNA from alignment at CM002466.1:855068..857796- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5793 ID=rna5793|Name=rna5793|organism=Nannochloropsis gaditana|type=mRNA|length=2729bp|location=Sequence derived from alignment at CM002466.1:855068..857796- (Nannochloropsis gaditana)
AGGAGAAAGGGTGGGAGCTGCGGTGACGGCACACACGGAGGACAGGCAGG
CAGGGGCGTCCACAACCACTCCGGGGTTAGCCAGCCGTGACGTGGACTTT
CTCCTTGGAGGAAGCTGGGACCTAGGCCGGTCGAAGCGTTCGGAGAAGCA
GGACGAGCGAGCGAGTATCTTGCAGTTGGCCACCCGCGATCAGGCCTTCA
TTTTCGACCTGTGGAGCCTGGCGGGAAGAGGCGCATGGGCGCCCGTCGAG
TTTCACGCGGACGGGTCCCAGGGAGGATCGACGCTAAGGGCGGGACTGGA
TGCCTGCCTGGGACCTCTGTTTGAAGATGCGCGTGTCCTGAAGCTGGGCT
TCGGCCTAGGCGGGGACTTGGACGTTTTGCGTCGTTCATGGCCCCAGATC
AAGGCGTTCCAGACCCTGGTGGGTGCCTTGGATGTGGGCGATTTGCGAAC
GGGGAGCGCCGGCGTCTTTTCTACTCGGCCAGGGTCAAGGGCACGGGGTC
GTGGCGGTGGGGAGGCTCAAGCCAAAGGGCTCTCGGCGGTGTGTAGGCAA
TGGCTGGGGAAAGATTTGAACAAGGCGGAGCAAGTCTCCGATTGGGATGC
ACGGCCACTGAGTGCGTCGCAAGTGAAGTATGCGGCGATGGACGCGTGGG
TGTTGACAGCAATTTTCGATGAGTTTTGTCGCCGGGGTTCCGAGCAGGCG
CGAAGGGAGTGGTTGGGGCGCAGACGCACTTTCCAGGGCAGGAAGGAAAG
GTGGATGCAGGAGGAAAAGGACGGGGAGAGGGAAAGCAAAGGGGAGGGAC
AAGGCGCAGGAACTTGTGTAGTGAAGTCTGTGGGGGGTCCCGTAAGTGGC
GGGGGGGCTGCTGAGAATGGTATGGACGGAGGGCATGGTGACTCAAGCCA
TCGAACTAGTCATGGCAGCAGCTGTCCGATAGAAACCTACGTGTTGGAGG
CTTACAGCAGCGGCCATGTGCCACACATGGCCTCGACCCCCACCTTCCCT
CCCATCACTTTCTTCGACGAGGACACCTCCGATCCGGGTATCCTGCCGGC
TGACTTTCCGCAAGCCTTGAGGACGAAAAGTGTCGCCTTGATGGTGACCG
GCAACCTTTCAGTGCCTACATCTCAGACTAAAGCCTCACGCCGGACGGAC
CCTGCAAAAGAAATGGAGGAGGATGGAGTGGTGGGGGGGGAGAGGGAAGA
TGGAGCCACGGGCGGACAGCGGCCCCCAGAGGTTACGTGCACCCCCCTCC
TTGTGGTCGCACCCGCCACCGCCAAAGTCAACTTCTCCCGTCTGGCGGCA
TGGTTGGGCTTGCCCCGGGCGGCCTTACGCCTGGCCACGGCCGACGAATG
CCTCTCTGTGCTCGCTTTCCCTCCCGGCTCTATTCCCCCCGTTGGGCACC
GGACGCCCGCCCGCATGGTGCTGGATCAGAGCCTGTGTCCGCACCCTCCT
CCCTCTTTTACCCTTGTCCCTGTTGACACCCTGTCACCGGCGTCACCTCG
CGCCATGCCCCGTCTTCTTTGTGGGGCGGGGGCTCCCAACAAGGTATTTA
TTTGTCGGCCAGAGGAACTGCTTGGCCTGGGGGGGGCAAATGCAGTGGTC
GCGCCGGTATGTTCATCCTCCTCCACTGGCAGTGCTTCCTCCCCCTTCGC
ACCTTTAAACCCCTTGTCCGGCCTCCCGTCGGCCGTCTGCAGTGCCTTGA
CCGGATCGACAGAAGGGAAAGAAAAAGGCCCACGCCTCGCACCAGGGGAC
AAGGAGACAAGGGAGGAGCTCACTTTCCTTGTCGACTCCATGTTGGGCCG
CCTGTCGAAATGGCTGCGGGTGCTTGGTGTGGACGTGGAATTTCACGATT
TTCACCTCACCTCCATCCTGTCCCACAAGGCTGCTAGCAGTCTGACCCAC
ACGAGCACCAGCATTCGTCCCGCCCCTCCCGGTACGCCCCCCCCAATCCT
GTTGAGGGCACATCGGTCCAAGCGCGTAGTCCTGACGAGGGATCGGCGCT
TGGTCGAAAGCCGACACAATGCCTTGCTAGGTGTGTACACCTATCTGGTG
CAGGGAAACGATACCCGGCAGCAGTTGGAGCAGGTGGTTGAAACTTTTAA
AATTCAGTTGGACGTGGAGGAGCTGATGAGCCGGTGCTCGGGCTGCAATG
CGAAGGGGTACGTGGCATTGAGCAAGGAGGAAATTGAGGCGCGGCAGGAC
ATCCCCGAGCGGGTGAAGAGGAATGTGGACACCTTCTGGACCTGTGTGAA
CGAGGAGTGTGAGAAACTCTATTGGAAAGGAGAGATGTGGAACAAAGCTT
CGAGCAAGTTTGGGAGAATGATAGCGGAGATGACGGGGAGGACGGAGAGA
CTGGGAGGACCCGAGGCATTCGACAGGATGGGGGAAGGAGGGGAAGACGA
GGATGAGGAGGAGGAGGAAGGAGAGGAGGAAGAGGAAGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAAGTGGAGGAGGAGGAGGAAGTGGAG
GAGGAGGAGGAAGTGGAGGAGGTAGAGGAGCAGTGGGAGGCATGAGACCT
GCGCACAGGAGGGATGGGGATTAGTAGTGAAGGCTCAAGGAGAGAGATAT
GGTTCCTAGACAAGTCTGGGTATGATCGGGCATTGTTTGATTTAGCGAGG
GTGCGCGGGAAAACCGTCAGTGAAGGCGGCTTGTCGATACCTTGTACAGA
TCGCTCACACTCTGCATACCACGAGCTAG back to topCoding sequence (CDS) from alignment at CM002466.1:855068..857796- >rna5793 ID=rna5793|Name=rna5793|organism=Nannochloropsis gaditana|type=CDS|length=3936bp|location=Sequence derived from alignment at CM002466.1:855068..857796- (Nannochloropsis gaditana)
CGAGGGTGCGCGGGAAAACCGTCAGTGAAGGCGGCTTGTCGATACCTTGT
ACAGATCGCTCACACTCTGCATACCACGAGCTAGATGGACGCGTGGGTGT
TGACAGCAATTTTCGATGAGTTTTGTCGCCGGGGTTCCGAGCAGGCGCGA
AGGGAGTGGTTGGGGCGCAGACGCACTTTCCAGGGCAGGAAGGAAAGGTG
GATGCAGGAGGAAAAGGACGGGGAGAGGGAAAGCAAAGGGGAGGGACAAG
GCGCAGGAACTTGTGTAGTGAAGTCTGTGGGGGGTCCCGTAAGTGGCGGG
GGGGCTGCTGAGAATGGTATGGACGGAGGGCATGGTGACTCAAGCCATCG
AACTAGTCATGGCAGCAGCTGTCCGATAGAAACCTACGTGTTGGAGGCTT
ACAGCAGCGGCCATGTGCCACACATGGCCTCGACCCCCACCTTCCCTCCC
ATCACTTTCTTCGACGAGGACACCTCCGATCCGGGTATCCTGCCGGCTGA
CTTTCCGCAAGCCTTGAGGACGAAAAGTGTCGCCTTGATGGTGACCGGCA
ACCTTTCAGTGCCTACATCTCAGACTAAAGCCTCACGCCGGACGGACCCT
GCAAAAGAAATGGAGGAGGATGGAGTGGTGGGGGGGGAGAGGGAAGATGG
AGCCACGGGCGGACAGCGGCCCCCAGAGGTTACGTGCACCCCCCTCCTTG
TGGTCGCACCCGCCACCGCCAAAGTCAACTTCTCCCGTCTGGCGGCATGG
TTGGGCTTGCCCCGGGCGGCCTTACGCCTGGCCACGGCCGACGAATGCCT
CTCTGTGCTCGCTTTCCCTCCCGGCTCTATTCCCCCCGTTGGGCACCGGA
CGCCCGCCCGCATGGTGCTGGATCAGAGCCTGTGTCCGCACCCTCCTCCC
TCTTTTACCCTTGTCCCTGTTGACACCCTGTCACCGGCGTCACCTCGCGC
CATGCCCCGTCTTCTTTGTGGGGCGGGGGCTCCCAACAAGGTATTTATTT
GTCGGCCAGAGGAACTGCTTGGCCTGGGGGGGGCAAATGCAGTGGTCGCG
CCGGTATGTTCATCCTCCTCCACTGGCAGTGCTTCCTCCCCCTTCGCACC
TTTAAACCCCTTGTCCGGCCTCCCGTCGGCCGTCTGCAGTGCCTTGACCG
GATCGACAGAAGGGAAAGAAAAAGGCCCACGCCTCGCACCAGGGGACAAG
GAGACAAGGGAGGAGCTCACTTTCCTTGTCGACTCCATGTTGGGCCGCCT
GTCGAAATGGCTGCGGGTGCTTGGTGTGGACGTGGAATTTCACGATTTTC
ACCTCACCTCCATCCTGTCCCACAAGGCTGCTAGCAGTCTGACCCACACG
AGCACCAGCATTCGTCCCGCCCCTCCCGGTACGCCCCCCCCAATCCTGTT
GAGGGCACATCGGTCCAAGCGCGTAGTCCTGACGAGGGATCGGCGCTTGG
TCGAAAGCCGACACAATGCCTTGCTAGGTGTGTACACCTATCTGGTGCAG
GGAAACGATACCCGGCAGCAGTTGGAGCAGGTGGTTGAAACTTTTAAAAT
TCAGTTGGACGTGGAGGAGCTGATGAGCCGGTGCTCGGGCTGCAATGCGA
AGGGGTACGTGGCATTGAGCAAGGAGGAAATTGAGGCGCGGCAGGACATC
CCCGAGCGGGTGAAGAGGAATGTGGACACCTTCTGGACCTGTGTGAACGA
GGAGTGTGAGAAACTCTATTGGAAAGGAGAGATGTGGAACAAAGCTTCGA
GCAAGTTTGGGAGAATGATAGCGGAGATGACGGGGAGGACGGAGAGACTG
GGAGGACCCGAGGCATTCGACAGGATGGGGGAAGGAGGGGAAGACGAGGA
TGAGGAGGAGGAGGAAGGAGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAAGTGGAGGAGGAGGAGGAAGTGGAGGAG
GAGGAGGAAGTGGAGGAGCGAGGGTGCGCGGGAAAACCGTCAGTGAAGGC
GGCTTGTCGATACCTTGTACAGATCGCTCACACTCTGCATACCACGAGCT
AGATGGACGCGTGGGTGTTGACAGCAATTTTCGATGAGTTTTGTCGCCGG
GGTTCCGAGCAGGCGCGAAGGGAGTGGTTGGGGCGCAGACGCACTTTCCA
GGGCAGGAAGGAAAGGTGGATGCAGGAGGAAAAGGACGGGGAGAGGGAAA
GCAAAGGGGAGGGACAAGGCGCAGGAACTTGTGTAGTGAAGTCTGTGGGG
GGTCCCGTAAGTGGCGGGGGGGCTGCTGAGAATGGTATGGACGGAGGGCA
TGGTGACTCAAGCCATCGAACTAGTCATGGCAGCAGCTGTCCGATAGAAA
CCTACGTGTTGGAGGCTTACAGCAGCGGCCATGTGCCACACATGGCCTCG
ACCCCCACCTTCCCTCCCATCACTTTCTTCGACGAGGACACCTCCGATCC
GGGTATCCTGCCGGCTGACTTTCCGCAAGCCTTGAGGACGAAAAGTGTCG
CCTTGATGGTGACCGGCAACCTTTCAGTGCCTACATCTCAGACTAAAGCC
TCACGCCGGACGGACCCTGCAAAAGAAATGGAGGAGGATGGAGTGGTGGG
GGGGGAGAGGGAAGATGGAGCCACGGGCGGACAGCGGCCCCCAGAGGTTA
CGTGCACCCCCCTCCTTGTGGTCGCACCCGCCACCGCCAAAGTCAACTTC
TCCCGTCTGGCGGCATGGTTGGGCTTGCCCCGGGCGGCCTTACGCCTGGC
CACGGCCGACGAATGCCTCTCTGTGCTCGCTTTCCCTCCCGGCTCTATTC
CCCCCGTTGGGCACCGGACGCCCGCCCGCATGGTGCTGGATCAGAGCCTG
TGTCCGCACCCTCCTCCCTCTTTTACCCTTGTCCCTGTTGACACCCTGTC
ACCGGCGTCACCTCGCGCCATGCCCCGTCTTCTTTGTGGGGCGGGGGCTC
CCAACAAGGTATTTATTTGTCGGCCAGAGGAACTGCTTGGCCTGGGGGGG
GCAAATGCAGTGGTCGCGCCGGTATGTTCATCCTCCTCCACTGGCAGTGC
TTCCTCCCCCTTCGCACCTTTAAACCCCTTGTCCGGCCTCCCGTCGGCCG
TCTGCAGTGCCTTGACCGGATCGACAGAAGGGAAAGAAAAAGGCCCACGC
CTCGCACCAGGGGACAAGGAGACAAGGGAGGAGCTCACTTTCCTTGTCGA
CTCCATGTTGGGCCGCCTGTCGAAATGGCTGCGGGTGCTTGGTGTGGACG
TGGAATTTCACGATTTTCACCTCACCTCCATCCTGTCCCACAAGGCTGCT
AGCAGTCTGACCCACACGAGCACCAGCATTCGTCCCGCCCCTCCCGGTAC
GCCCCCCCCAATCCTGTTGAGGGCACATCGGTCCAAGCGCGTAGTCCTGA
CGAGGGATCGGCGCTTGGTCGAAAGCCGACACAATGCCTTGCTAGGTGTG
TACACCTATCTGGTGCAGGGAAACGATACCCGGCAGCAGTTGGAGCAGGT
GGTTGAAACTTTTAAAATTCAGTTGGACGTGGAGGAGCTGATGAGCCGGT
GCTCGGGCTGCAATGCGAAGGGGTACGTGGCATTGAGCAAGGAGGAAATT
GAGGCGCGGCAGGACATCCCCGAGCGGGTGAAGAGGAATGTGGACACCTT
CTGGACCTGTGTGAACGAGGAGTGTGAGAAACTCTATTGGAAAGGAGAGA
TGTGGAACAAAGCTTCGAGCAAGTTTGGGAGAATGATAGCGGAGATGACG
GGGAGGACGGAGAGACTGGGAGGACCCGAGGCATTCGACAGGATGGGGGA
AGGAGGGGAAGACGAGGATGAGGAGGAGGAGGAAGGAGAGGAGGAAGAGG
AAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTGGAGGAG
GAGGAGGAAGTGGAGGAGGAGGAGGAAGTGGAGGAG back to top
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