EWM24907.1, cds5778 (CDS) Nannochloropsis gaditana

Overview
NameEWM24907.1
Unique Namecds5778
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:855276..857159 -
Alignment locationCM002466.1:855068..855151 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24907.1
ProductProtein of unknown function DUF82
Orig transcript idgnl|cribi|Naga_100116g8.9035.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:855276..857159 -
CM002466.1supercontigCM002466.1:855068..855151 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0002161aminoacyl-tRNA editing activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002782Mut7-C_RNAse_dom
IPR007214YbaK/aa-tRNA-synth-assoc-dom
Homology
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|585106534|gb|EWM24907.1| (Protein of unknown function DUF82 [Nannochloropsis gaditana])

HSP 1 Score: 1329.69 bits (3440), Expect = 0.000e+0
Identity = 655/655 (100.00%), Postives = 655/655 (100.00%), Query Frame = 0
Query:    1 MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS 655
            MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS
Sbjct:    1 MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS 655          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|255086371|ref|XP_002509152.1| (predicted protein [Micromonas commoda] >gi|226524430|gb|ACO70410.1| predicted protein [Micromonas commoda])

HSP 1 Score: 137.117 bits (344), Expect = 1.015e-29
Identity = 116/386 (30.05%), Postives = 168/386 (43.52%), Query Frame = 0
Query:  200 TCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGL-----PSAVCSALTGSTEGKEKGP----------RLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTE 570
            T  P++ +   T + +   +A+  G+ R   RLAT DEC+ V  FPPGS+PP+GHR     ++D +L                S     A   +  GAGAP+ VF C P  L     A  +  PV  SS    A+   A     +       PS    A  GS +    GP              GD     +  F+ D  LGRL++WLR LGVD E H       L +K  ++                  +L  A R  RV+LT+DRRL++ +      V  +LV+ +D ++QL +V   F ++    +L++RC+ CN       + EE+ A   IP +VK + + FW C    CEK+YW G   + A S     IA    R  
Sbjct:  836 TWEPVVALLRGTDRADLRAIASHFGVARRHARLATPDECVRVFGFPPGSMPPLGHRVECPTLMDSALMD--------------SALREHAGGFVYPGAGAPHLVFRCLPAVLERATAATTL--PVAESSVAREAAKRAAAAAAAAAASSSRDPSTASFADGGSLDWGLGGPSATSHEGSEEHEEHGDGTRERQRRFVADGSLGRLARWLRCLGVDAE-HVPVPAQRLGNKGNNNNCQYGA------------LLALAQRDDRVILTKDRRLLQRKD----AVAAFLVEDDDPKRQLARVSAHFGLRYRRGKLLTRCARCNGAVERRCTPEEVAANGAIPAKVKASTNEFWAC--GRCEKVYWVGPKSHLAMSFIDAEIAPTVTRAR 1186          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|673045303|ref|XP_008876612.1| (hypothetical protein H310_11653 [Aphanomyces invadans] >gi|574467645|gb|ETV94667.1| hypothetical protein H310_11653 [Aphanomyces invadans])

HSP 1 Score: 130.183 bits (326), Expect = 1.013e-27
Identity = 95/365 (26.03%), Postives = 150/365 (41.10%), Query Frame = 0
Query:  199 VTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMV-LDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMI 562
            V   P + +     +++  +LA   G+ R  +R AT  ECL V  + PG++PP+ H+ P   V LD+ + P  P  F                       G P+ +  C    LL L                               +P A  +AL+ + +    G  L P          FL DSMLGR++KWLR+ GVD+   D                        A P     + L +  S R++LTRDR+L + R         Y+V  ++   Q +++   F I+    E MSRC+ CN KG+  +   ++  R D+P++V   VD F+ C  + C +LYW G  ++ A +K  ++ 
Sbjct:  596 VNSKPHVAILCHGTRLDLVQLAKLAGVTRRKVRFATPQECLQVFGYAPGTVPPIAHKAPDICVWLDKDVPPSIPLLF----------------------GGGPHCILKCTLSTLLLL-------------------------------VPHANVAALSVTPDVSSSGAVLEPK---------FLADSMLGRVAKWLRMTGVDILHWDI----------------------VANPNKKDMLALASSES-RIILTRDRKLAQHRE----AFACYVVASDNVEMQFQEIKNYFGIEYHEAEFMSRCAKCNQKGFHIVETAQVVGRDDVPQKVLDTVDEFYEC--KTCRQLYWVGPKYSTAHAKMKQIF 869          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|698811118|ref|XP_009838588.1| (hypothetical protein H257_12906 [Aphanomyces astaci] >gi|574106628|gb|ETV72145.1| hypothetical protein H257_12906 [Aphanomyces astaci])

HSP 1 Score: 120.939 bits (302), Expect = 1.037e-24
Identity = 97/391 (24.81%), Postives = 153/391 (39.13%), Query Frame = 0
Query:  173 AKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDI-PERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMI 562
            A E +++     E E    G      V   P + V     +++ + +A   G+ R  +R AT  EC+ V  + PG++PP+ H+ P   +   S  PH  P                       G G PN V  C    LL L     V     +SS++ + + P    +P                                     FL DSMLGR++KWLR+ GVD+                    H   S+          +L  A    R+VLTRDR+L + R         Y+V  +    Q +++ + F I+    E MSRC+ CN KG+  +   ++  R D+ P++V   V  F+ C  + C +LYW G  ++ A +K  ++ 
Sbjct:  582 ADEFDDNAAAATESELQVVGNSLCLMVNSAPHVAVLHQGHRLDLACVAKAAGVSRRKVRFATPQECVQVFGYAPGTVPPIAHKAPDTCIWVDSQLPHGVPLVL--------------------GGGGPNTVLKCSLSTLLRLAPHAQVAVLTINSSASDTKTGPIESSSP------------------------------------KFLADSMLGRVAKWLRMTGVDI-------------------LHWDISVN----ANKHDMLALATGDGRIVLTRDRKLAQQR----AAFACYVVASDHVEAQFQEIKKHFGIEYHESEFMSRCAKCNQKGFNIVDVAQVVERADVPPQKVTDTVQEFYEC--QSCRQLYWVGPKYSTAQAKMKQIF 887          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|675204911|ref|XP_008911340.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|567981087|gb|ETL31533.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568010610|gb|ETL84795.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568088364|gb|ETN03224.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570942526|gb|ETP07783.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570973073|gb|ETP35814.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 112.464 bits (280), Expect = 4.455e-22
Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +                S   + A       +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|567952427|gb|ETK78103.1| (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 112.464 bits (280), Expect = 4.494e-22
Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +                S   + A       +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|566014986|gb|ETI37897.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568040474|gb|ETM37930.1| hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 112.079 bits (279), Expect = 5.312e-22
Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +                S   + A       +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVESLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|567952428|gb|ETK78104.1| (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 111.694 bits (278), Expect = 6.676e-22
Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +     T+   HKAA                    +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|675204913|ref|XP_008911341.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|567981088|gb|ETL31534.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568010611|gb|ETL84796.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568088365|gb|ETN03225.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570942527|gb|ETP07784.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570973074|gb|ETP35815.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 111.694 bits (278), Expect = 6.855e-22
Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +     T+   HKAA                    +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738          
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|566014987|gb|ETI37898.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568040475|gb|ETM37931.1| hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 111.694 bits (278), Expect = 7.485e-22
Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query:  203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
            P +    A  K++ ++LA   G+ R  ++LAT  EC     F PG+IPP GHR       +QS   H         V   + ++ + +  L+CG G+         E LL L                  A      +  +  +   V SA+    E   K P         RE   FL DSM+ R+ KWLR +G+DV   D +     T+   HKAA                    +L  +   +R++LTRD++L   R         ++V  +D  +Q +++   F ++L  +E+MSRCS CNAKG+  V L     +   ++   V   V  FW C    C K+YW+G  ++   +   RM  E
Sbjct:  439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVESLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738          
The following BLAST results are available for this feature:
BLAST of EWM24907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106534|gb|EWM24907.1|0.000e+0100.00Protein of unknown function DUF82 [Nannochloropsis... [more]
gi|255086371|ref|XP_002509152.1|1.015e-2930.05predicted protein [Micromonas commoda] >gi|2265244... [more]
gi|673045303|ref|XP_008876612.1|1.013e-2726.03hypothetical protein H310_11653 [Aphanomyces invad... [more]
gi|698811118|ref|XP_009838588.1|1.037e-2424.81hypothetical protein H257_12906 [Aphanomyces astac... [more]
gi|675204911|ref|XP_008911340.1|4.455e-2226.65hypothetical protein, variant 1 [Phytophthora para... [more]
gi|567952427|gb|ETK78103.1|4.494e-2226.65hypothetical protein, variant 1 [Phytophthora para... [more]
gi|566014986|gb|ETI37897.1|5.312e-2226.65hypothetical protein, variant 1 [Phytophthora para... [more]
gi|567952428|gb|ETK78104.1|6.676e-2227.17hypothetical protein, variant 2 [Phytophthora para... [more]
gi|675204913|ref|XP_008911341.1|6.855e-2227.17hypothetical protein, variant 2 [Phytophthora para... [more]
gi|566014987|gb|ETI37898.1|7.485e-2227.17hypothetical protein, variant 2 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5793rna5793Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications