EWM24907.1, cds5778 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|585106534|gb|EWM24907.1| (Protein of unknown function DUF82 [Nannochloropsis gaditana]) HSP 1 Score: 1329.69 bits (3440), Expect = 0.000e+0 Identity = 655/655 (100.00%), Postives = 655/655 (100.00%), Query Frame = 0
Query: 1 MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS 655
MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS
Sbjct: 1 MDAWVLTAIFDEFCRRGSEQARREWLGRRRTFQGRKERWMQEEKDGERESKGEGQGAGTCVVKSVGGPVSGGGAAENGMDGGHGDSSHRTSHGSSCPIETYVLEAYSSGHVPHMASTPTFPPITFFDEDTSDPGILPADFPQALRTKSVALMVTGNLSVPTSQTKASRRTDPAKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTERLGGPEAFDRMGEGGEDEDEEEEEGEEEEEEEEEEEEEEEEEEVEEEEEVEEEEEVEERGCAGKPSVKAACRYLVQIAHTLHTTS 655
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|255086371|ref|XP_002509152.1| (predicted protein [Micromonas commoda] >gi|226524430|gb|ACO70410.1| predicted protein [Micromonas commoda]) HSP 1 Score: 137.117 bits (344), Expect = 1.015e-29 Identity = 116/386 (30.05%), Postives = 168/386 (43.52%), Query Frame = 0
Query: 200 TCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGL-----PSAVCSALTGSTEGKEKGP----------RLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAEMTGRTE 570
T P++ + T + + +A+ G+ R RLAT DEC+ V FPPGS+PP+GHR ++D +L S A + GAGAP+ VF C P L A + PV SS A+ A + PS A GS + GP GD + F+ D LGRL++WLR LGVD E H L +K ++ +L A R RV+LT+DRRL++ + V +LV+ +D ++QL +V F ++ +L++RC+ CN + EE+ A IP +VK + + FW C CEK+YW G + A S IA R
Sbjct: 836 TWEPVVALLRGTDRADLRAIASHFGVARRHARLATPDECVRVFGFPPGSMPPLGHRVECPTLMDSALMD--------------SALREHAGGFVYPGAGAPHLVFRCLPAVLERATAATTL--PVAESSVAREAAKRAAAAAAAAAASSSRDPSTASFADGGSLDWGLGGPSATSHEGSEEHEEHGDGTRERQRRFVADGSLGRLARWLRCLGVDAE-HVPVPAQRLGNKGNNNNCQYGA------------LLALAQRDDRVILTKDRRLLQRKD----AVAAFLVEDDDPKRQLARVSAHFGLRYRRGKLLTRCARCNGAVERRCTPEEVAANGAIPAKVKASTNEFWAC--GRCEKVYWVGPKSHLAMSFIDAEIAPTVTRAR 1186
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|673045303|ref|XP_008876612.1| (hypothetical protein H310_11653 [Aphanomyces invadans] >gi|574467645|gb|ETV94667.1| hypothetical protein H310_11653 [Aphanomyces invadans]) HSP 1 Score: 130.183 bits (326), Expect = 1.013e-27 Identity = 95/365 (26.03%), Postives = 150/365 (41.10%), Query Frame = 0
Query: 199 VTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMV-LDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMI 562
V P + + +++ +LA G+ R +R AT ECL V + PG++PP+ H+ P V LD+ + P P F G P+ + C LL L +P A +AL+ + + G L P FL DSMLGR++KWLR+ GVD+ D A P + L + S R++LTRDR+L + R Y+V ++ Q +++ F I+ E MSRC+ CN KG+ + ++ R D+P++V VD F+ C + C +LYW G ++ A +K ++
Sbjct: 596 VNSKPHVAILCHGTRLDLVQLAKLAGVTRRKVRFATPQECLQVFGYAPGTVPPIAHKAPDICVWLDKDVPPSIPLLF----------------------GGGPHCILKCTLSTLLLL-------------------------------VPHANVAALSVTPDVSSSGAVLEPK---------FLADSMLGRVAKWLRMTGVDILHWDI----------------------VANPNKKDMLALASSES-RIILTRDRKLAQHRE----AFACYVVASDNVEMQFQEIKNYFGIEYHEAEFMSRCAKCNQKGFHIVETAQVVGRDDVPQKVLDTVDEFYEC--KTCRQLYWVGPKYSTAHAKMKQIF 869
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|698811118|ref|XP_009838588.1| (hypothetical protein H257_12906 [Aphanomyces astaci] >gi|574106628|gb|ETV72145.1| hypothetical protein H257_12906 [Aphanomyces astaci]) HSP 1 Score: 120.939 bits (302), Expect = 1.037e-24 Identity = 97/391 (24.81%), Postives = 153/391 (39.13%), Query Frame = 0
Query: 173 AKEMEEDGVVGGEREDGATGGQRPPEVTCTPLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGYVALSKEEIEARQDI-PERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMI 562
A E +++ E E G V P + V +++ + +A G+ R +R AT EC+ V + PG++PP+ H+ P + S PH P G G PN V C LL L V +SS++ + + P +P FL DSMLGR++KWLR+ GVD+ H S+ +L A R+VLTRDR+L + R Y+V + Q +++ + F I+ E MSRC+ CN KG+ + ++ R D+ P++V V F+ C + C +LYW G ++ A +K ++
Sbjct: 582 ADEFDDNAAAATESELQVVGNSLCLMVNSAPHVAVLHQGHRLDLACVAKAAGVSRRKVRFATPQECVQVFGYAPGTVPPIAHKAPDTCIWVDSQLPHGVPLVL--------------------GGGGPNTVLKCSLSTLLRLAPHAQVAVLTINSSASDTKTGPIESSSP------------------------------------KFLADSMLGRVAKWLRMTGVDI-------------------LHWDISVN----ANKHDMLALATGDGRIVLTRDRKLAQQR----AAFACYVVASDHVEAQFQEIKKHFGIEYHESEFMSRCAKCNQKGFNIVDVAQVVERADVPPQKVTDTVQEFYEC--QSCRQLYWVGPKYSTAQAKMKQIF 887
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|675204911|ref|XP_008911340.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|567981087|gb|ETL31533.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568010610|gb|ETL84795.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568088364|gb|ETN03224.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570942526|gb|ETP07783.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570973073|gb|ETP35814.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 112.464 bits (280), Expect = 4.455e-22 Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + S + A +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|567952427|gb|ETK78103.1| (hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 112.464 bits (280), Expect = 4.494e-22 Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + S + A +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|566014986|gb|ETI37897.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568040474|gb|ETM37930.1| hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 112.079 bits (279), Expect = 5.312e-22 Identity = 97/364 (26.65%), Postives = 151/364 (41.48%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFHLTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + S + A +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 459 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVESLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPY----------------SVPKKTASQDHKAALLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 758
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|567952428|gb|ETK78104.1| (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 111.694 bits (278), Expect = 6.676e-22 Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + T+ HKAA +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|675204913|ref|XP_008911341.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|567981088|gb|ETL31534.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568010611|gb|ETL84796.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568088365|gb|ETN03225.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570942527|gb|ETP07784.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570973074|gb|ETP35815.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 111.694 bits (278), Expect = 6.855e-22 Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + T+ HKAA +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVKSLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738
BLAST of EWM24907.1 vs. NCBI_GenBank
Match: gi|566014987|gb|ETI37898.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568040475|gb|ETM37931.1| hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 111.694 bits (278), Expect = 7.485e-22 Identity = 100/368 (27.17%), Postives = 154/368 (41.85%), Query Frame = 0
Query: 203 PLLVVAPATAKVNFSRLAAWLGLPRAALRLATADECLSVLAFPPGSIPPVGHRTPARMVLDQSLCPHPPPSFTLVPVDTLSPASPRAMPRLLCGAGAPNKVFICRPEELLGLGGANAVVAPVCSSSSTGSASSPFAPLNPLSGLPSAVCSALTGSTEGKEKGPRLAPGDKETREELTFLVDSMLGRLSKWLRVLGVDVEFHDFH----LTSILSHKAASSLTHTSTSIRPAPPGTPPPILLRAHRSKRVVLTRDRRLVESRHNALLGVYTYLVQGNDTRQQLEQVVETFKIQLDVEELMSRCSGCNAKGY--VALSKEEIEARQDIPERVKRNVDTFWTCVNEECEKLYWKGEMWNKASSKFGRMIAE 564
P + A K++ ++LA G+ R ++LAT EC F PG+IPP GHR +QS H V + ++ + + L+CG G+ E LL L A + + + V SA+ E K P RE FL DSM+ R+ KWLR +G+DV D + T+ HKAA +L + +R++LTRD++L R ++V +D +Q +++ F ++L +E+MSRCS CNAKG+ V L + ++ V V FW C C K+YW+G ++ + RM E
Sbjct: 439 PCVACIEANCKLDTAQLAMLCGVSRRRIKLATPAECCDYFGFEPGTIPPFGHR-------EQS--DHR--------VRIYASSTLQHVESLVCGGGSH--------ESLLWLNS---------------KAYFALIDIETVGDIQRGV-SAVESINEQATKPPARQERKVSIRE-YKFLADSMVARVGKWLRTIGMDVIIWDPYSVPKKTASQDHKAA--------------------LLALSVCEQRILLTRDKKLANRRDAG----ACFVVSSDDPFKQFQEIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVC--RVCHKIYWEGPKYDSNYANLLRMFDE 738 The following BLAST results are available for this feature:
BLAST of EWM24907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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