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Properties
| Property Name | Value |
|---|
| Product | ribulose-phosphate 3-epimerase |
| Orig transcript id | gnl|cribi|Naga_100092g19.2133.mrna |
| Orig protein id | gnl|cribi|Naga_100092g19.2133 |
| Gene | RPE |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:825545..826930 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5778 ID=rna5778|Name=rna5778|organism=Nannochloropsis gaditana|type=mRNA|length=1605bp
GCCGGTTTCCGTATCGGTAGCCTGGTGCAATTTCTTCGCCGTAGAAGTTG
ATATTGTCTCTTGGAAGGATACGTCGAATTGCTGCGGATCCCACGGTAAA
CAGATCCGCAAGCAGGGGGCGAATTTGTGTCCCAGGCAGTAATCCCATCT
CTCCTTGAGGAAAGAAAGAAGCAGCTTGCCGTGCTAAGCTTTGATCGAAG
GCTTACCAAAGGGCATCTTTTTTTTAAAGGGATGTTTTTTTCTTCGAGAA
GTCTTGCCTTCCTGCTCTGGGTGTACACGTACTCACAGGCATCTATTGCT
CGGTTCAGCATGCGTTCTTAAGAATAGTTCTTGTAGGCTGCGGGAAATAA
AGCCTTCCGTCCTGTGTCCCTGTCCTTCTCACTGTCCCCTTTTCACTTTT
TTCAGCGCTTTCGATTAAAATGAAGTTCGCCTCCCTCCTGTCTTTGCTTG
CGGCCCCCCTCCTGGCCTCTGCTTTCCTTGCTCCGGCCCCCAAGACTACT
CGCGCCCGCGGTGTGGTCTCCATGGTCCAATCCAAAGCTCTGCCTTTCTT
GGCTGCCCCGAAGAAGCTAGATGGTTCCCTGGTCGGCGACTTTGGCTTCG
ACCCCATGGGGATCTCGGATCAGGTGGCAAATTTGAAGTACGTACGCGCG
GCCGAGCTTAAACACGGGCGGGTGGCCATGCTTGGTTTCCTAGGCTGGGT
CGTGACGCAATTCGTCCACCTCCCGGGGGAGATCTACGCGGAATCCAACC
CGCTGAAGGCGATCGCCGCCGTGCCCCTCATCAGCCACGTGCAAATCTTT
CTCTTCATCGCTGCCATCGAGCTGGCGACCCTGGATAGGACGTACACGGC
GGACAAGCCTTGGGACCTGGGCTTCGACCCCATGAACATGAGCAAGGGAA
AGTCCGAGCAACAGATGAAGGATCTGGAGCTCAAGGAGCTCAAGAATGGC
CGCCTGGCAATGATCGCCATCATCGGACTCATGGCCCAGACCGCCTACAC
GGGCATTCCCCTTTTCTCTTGAACGGGTCAAGGGCTAGGTCTTGAGAATT
GGTAGGAAATTACATGTGTTGGGGGAGGAAAGATGACATCGAGCCCTTTG
CCCATTGTCCAGTATGCATGACTGTGGAAGGGACAGCGCCGACTCCATCT
CTTTATATACAACATTGTGGCGAGGGAGGATAGGGGACGGTCCTACAGTA
GAGGCAGCATTCAATGCATGCGGGTTTCATTTCATTTCCAATTGATCGGC
TCTCTCTAGTGCGCGCGCGTGTTTTCAGCTTTCTCCGGTTCTACTTGTAG
CAGTATCTGTGGGACGTTCGTTACGATTTAGCGGATTCTTACGAGACATT
TAAAATTCGAAACGGATTGATCCTTGCGAAGGATGAGTGGCGACGAAAAC
GGTTTTCTAACGCTTGCTATAACGTTTTGGTTTCCCCTTCCATTTTGGCA
CGTATTTCATCGAGCCCTTTCTACCCTTCGAGACGAATCGAGCAACCATA
GATCGAGCAATAAAGTAAAGTGGTTGTGGATGCGGTGGGATCGAATTCTG
TAACAACCTTCCTTTTGTTTGTCACATTGTTTGACTCCTGTTTGTCAGCC
TCTGC back to topprotein sequence of rna5778 >rna5778-protein ID=rna5778-protein|Name=rna5778|organism=Nannochloropsis gaditana|type=polypeptide|length=266bp
MARLSLLACAGVAALATVAHGFVPPVPRSYTRGRMAMAAKKDFWIAPSIL
SADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGV
TAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGC
KSGLVFNPATPLSLAQHVLDKVDIILLMSVNPGFGGQSFIPETLKKLKEA
RKMIDESGYDIRLEVDGGVGVANIKDIAEAGADFFVAGSAILKNPRTQDA
YKATIDAMRAELAKVQ back to topmRNA from alignment at CM002466.1:825545..826930- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5778 ID=rna5778|Name=rna5778|organism=Nannochloropsis gaditana|type=mRNA|length=1386bp|location=Sequence derived from alignment at CM002466.1:825545..826930- (Nannochloropsis gaditana)
ATGCCCCTTCTCCCCTTCCGTATAGCACCATGTCTTGGCAGTAAATTGCC
CATTATTCCACCGTACAGCTTCTGGATAGTGCGGATATATTATTAAATCA
CGCATCTTATGTTGGACCCTTTTGTGTCGTAGGCAGGTGTGTGAATTGCC
TCAATGCATGTCACGAGGTTTCAGCTGAGCGTCCACCCGATCCATGAAGC
CCTGCTGAAGTTGGCAACGTACCATCACACAGGTCTCAACAAATTACATG
ATTATTCGCGCACAGAGCACAGTTGTCAATTTTTCTGCAAATTTCTTTCT
TCCACATTTCCAAGGATGGCTCGTCTTTCTCTCCTCGCATGCGCCGGCGT
AGCAGCCCTCGCCACAGTAGCACACGGTTTTGTCCCCCCCGTCCCCCGCT
CATACACCCGCGGCCGCATGGCCATGGCTGCTAAGAAAGACTTCTGGATT
GCCCCATCCATTCTCTCTGCCGACTTTGCCAAGCTTGGACAAGAGGTTGA
CAACGTGTTGGCGGCGGGGGCCGACATTGTGCATTTCGACGTGATGGATA
ACCACTACGTGCCTAACTTGACCATTGGCCCCATGGTATGCAAAGCCCTC
CGCGACCACGGCGTCACGGCACCCATTGACGTACATCTCATGGTCTCACC
AGTGGATCGTATCATTCCTGATTTTGCGGATGCCGGCGCCTCTTTCATCA
CTTTCCACCCCGAAGCCACCAATCACATCGATCGGACTCTGCAGTTGATC
AAGAGCAAGGGGTGCAAATCTGGGTTGGTCTTTAACCCGGCCACTCCCCT
CTCCCTGGCACAGCATGTCTTGGACAAGGTGGACATCATTTTGCTCATGT
CCGTGAACCCGGGCTTTGGGGGCCAATCCTTTATTCCGGAGACGTTGAAA
AAATTGAAGGAGGCACGTAAAATGATCGACGAGAGCGGGTACGACATTCG
TCTGGAGGTGGACGGCGGTGTGGGCGTGGCGAACATCAAGGACATTGCGG
AGGCGGGGGCAGATTTCTTTGTGGCGGGAAGCGCGATCTTGAAGAACCCG
CGGACGCAGGACGCTTACAAAGCCACCATTGATGCCATGCGCGCCGAACT
GGCTAAGGTCCAGTAAAGCACGTCGTACAGGAGACCTGGAAGGCTCCCCA
GGGAGTGCTGAGCCGTGAATGATATTGCTGATTGCGCAGGGAAGGAGGGG
TAGAAAGGCAAGGAGGGGATCGCAGAGGCTGACAAACAGGAGTCAAACAA
TGTGACAAACAAAAGGAAGGTTGTTACAGAATTCGATCCCACCGCATCCA
CAACCACTTTACTTTATTGCTCGATCTATGGTTGCTCGATTCGTCTCGAA
GGGTAGAAAGGGCTCGATGAAATACGTGCCAAAATG back to topCoding sequence (CDS) from alignment at CM002466.1:825545..826930- >rna5778 ID=rna5778|Name=rna5778|organism=Nannochloropsis gaditana|type=CDS|length=801bp|location=Sequence derived from alignment at CM002466.1:825545..826930- (Nannochloropsis gaditana)
ATGGCTCGTCTTTCTCTCCTCGCATGCGCCGGCGTAGCAGCCCTCGCCAC
AGTAGCACACGGTTTTGTCCCCCCCGTCCCCCGCTCATACACCCGCGGCC
GCATGGCCATGGCTGCTAAGAAAGACTTCTGGATTGCCCCATCCATTCTC
TCTGCCGACTTTGCCAAGCTTGGACAAGAGGTTGACAACGTGTTGGCGGC
GGGGGCCGACATTGTGCATTTCGACGTGATGGATAACCACTACGTGCCTA
ACTTGACCATTGGCCCCATGGTATGCAAAGCCCTCCGCGACCACGGCGTC
ACGGCACCCATTGACGTACATCTCATGGTCTCACCAGTGGATCGTATCAT
TCCTGATTTTGCGGATGCCGGCGCCTCTTTCATCACTTTCCACCCCGAAG
CCACCAATCACATCGATCGGACTCTGCAGTTGATCAAGAGCAAGGGGTGC
AAATCTGGGTTGGTCTTTAACCCGGCCACTCCCCTCTCCCTGGCACAGCA
TGTCTTGGACAAGGTGGACATCATTTTGCTCATGTCCGTGAACCCGGGCT
TTGGGGGCCAATCCTTTATTCCGGAGACGTTGAAAAAATTGAAGGAGGCA
CGTAAAATGATCGACGAGAGCGGGTACGACATTCGTCTGGAGGTGGACGG
CGGTGTGGGCGTGGCGAACATCAAGGACATTGCGGAGGCGGGGGCAGATT
TCTTTGTGGCGGGAAGCGCGATCTTGAAGAACCCGCGGACGCAGGACGCT
TACAAAGCCACCATTGATGCCATGCGCGCCGAACTGGCTAAGGTCCAGTA
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