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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100092g3.2138.mrna |
| Orig protein id | gnl|cribi|Naga_100092g3.2138 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:778179..780534 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5764 ID=rna5764|Name=rna5764|organism=Nannochloropsis gaditana|type=mRNA|length=1597bp
TTAGCGTGGGTGTCTCCTCACATCGTCCATCTTCCCGCCCGATCAACCCC
TTTCCACCAGGCACGGGGCAGGCACCGTCAGGAAGATGAAGCTCCGGCCA
ATAGTCTCCGATAGAATTTTCAGGCATTTATTGCTGACCTTGGTTCTCCT
TGCCTCCCTTTTACCCGGCATCGCCTTTTCCTTCAAATTGGGCATCATCC
CTTCGGGCCCTAGTATAGGGATATTGACAAATCTGTCTGTCGATCAACCA
GATTTCTACCTTAGTAAGACACACATGCTCTTCCTTCTCGAAGCCTTCCC
ACTTTACCCTTCCAGTAACCTCTCTCTTGATGCGCCATCGCGTGGTGCTT
TGGAGCGTCTCGGATTCCAAGTCCTTCGCGTTTGGAACCTCGAACATCCC
TGACGCACTTCTCCTCTCCAATTGTCCGTAAAATCAGTTCCCCCCACCCT
ATCAGTGTAACGCGGTCCCCGCGAACCGCCGTGGCCTCGACCACCGCCAG
CACAGACACTGGCACCCTCACCAGCAATAGTCATGTTCAAACGAAAAAGA
GACGTCGTGAGAAGGCCACCGGGCTCGGCAAGATCAGGCCTGTTTTACAT
GCACTGCAACAGACGGCCTCACGAGCGGCCCCGCCCGGCTCCACGCGTCG
CAGTCTCGTCAAAAAGTTTGCCCGAGGGGTACTTTTCCTCCCCCCGCTTT
TTTTAGGCGGTGCTCTCAACATCGCTGCTCCTTCTGGTGCGATGGCCATT
GCACCGGCTGGTGTGGCAGCTGTAGACAAGACTCCTGGCAGATACAAAAA
CGTCGCGATGGGATCCATGGTCGAACCTCGGCCACGCAGTGCGTCAGGCG
TGGACGAGCGGGTCAAGCAGGAAGTCCTGCAAACTACTCAAGAATGGCTT
CAGACGGTCACCTCGAACCGCGCAACGGCTTCGGCGGAAACGGCCGCCTT
GTATGCTTCGGACGCCGTGTTGTGGGGAACGGTTTCGGAGGAACTTCGGG
TCAATCCCGCGGAAATTCGGTCGTATTTTGATTTTTTTGCCGCACTCCCT
GGATTGAGGGTGGCAGCCTATCAACCTTACGTAAGGATATTCGGAACGGG
AAATGAAGGAGAGACCGCCATCAACGACGGGTACTACGTCTTTGCGTGGC
GGGGCCCGGACGGCCGTGAGGTGCAGAAGCACGCACGGTATTCGTTTGTG
TACCGGAAAGAGGGGGGAAAATGGATGATTGTTGACCACCACTCATCCTT
GTTGCCGACTGCTCCTGCAGGGCTTGCGAAGGCGACGACGGTGGTGATGT
GATGGGAGGAAGACCAGGCGGGGGCCCAACAAAGACGAGAAGGAGGGAAA
AACTCGGCGCACAAAATGCCGAGGATGGATTAATTGTTGTCATGGCGAGA
CATAAATAGTATATGGAGTTGAATTTTGGTGAAGTGTAGATGTGTACCAT
AAGGGTGGGATGCGGAGAACGATATCGGAATAAGGATGGAAGGGGAGGTT
GAGCCCCGTGTGCATAAACGTTGTGGTAGAGTTTATCTCCCGTACGACGC
AAAACAAACTTCGGCGCGTGGCTACCCCACACACCATTTTCATCCCA back to topprotein sequence of rna5764 >rna5764-protein ID=rna5764-protein|Name=rna5764|organism=Nannochloropsis gaditana|type=polypeptide|length=361bp
MSDVKSLFRKKTKQAAKAKTEPVKPTAEEEEDDEWGVAPKPTEQLYLGNR
KARELIGGAYADVNLAVKVAHDDTKAVFHDVRKKAVSAAASEASPAAPVE
PSPPPAPEPAPTAQPGCVYRGVQDVAFSKNLPLIDYHILLGIYCSLSSPL
FSSPSPFLPVSLLPPDRSDRRWRSRRVLAEQGLIPPPLDSGSNSSSKENA
TATEAFPALSGFPSLGPARAAGPSPVVAAGRWGQVADTSSSRTTGQKIEK
EGGVTPAPAGTASEGAKIESEGPLAAPPSASNAVLSTPSSQGKEKESTFV
APTVTGATESLNVQDSSVGVRQEKVEGNVAVDVIAEGVATVDLKSKFGTK
KKKKKHIDIDA back to topmRNA from alignment at CM002466.1:778179..780534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5764 ID=rna5764|Name=rna5764|organism=Nannochloropsis gaditana|type=mRNA|length=2356bp|location=Sequence derived from alignment at CM002466.1:778179..780534- (Nannochloropsis gaditana)
ATTGCAACGTCGTCAGGCCCTCATTCCAGATATAATTTGTATTTTGAGAC
TTTGCTTGAGAGATGTAAAGTATTTATCGATGCGATCCGTATTCAAGTCG
CTCACGCAATCTTTGCACGCACTTACAGCCTTCTACACCTCTCCTCCGGC
GGCTAACTTTCGGGTATAACCTGAAGGAAAAGAGTGCGGCTGTGAGTGGA
AAGCCAAAAGCCAAGAAAGAGCTAGCCCTAGGTTCAAAATACAAACGTGT
GAGCCAGCCATGTCGGATGTCAAATCTTTGTTCCGCAAAAAAACCAAGCA
AGCGGTGCGTAGGAATCATGCTGAAGTCTTTCCGGTCCAAGACCGATAAT
TTTTTGACCTATCGTGTAACCTTTACACTGTGTAATACGCCTCATTCTAA
TAATTGAATCATCCACAATGGTTTTCCAATGACCAGGCCAAGGCTAAAAC
CGAACCAGTGAAGCCGTAAGTGCAAAATCCTCGATCAGCCTCCCTTGTCC
CTTCGACTTTATTTACCTCTGGTTCCGTCTCTCTTTTGAGCATCTATACC
AATTTAAGTCAGGTTTCATCCCGCTTATACACTTTTTGACACAATAAATT
ATTATGCCTTTCGCTGTCTCACAGAACAGCCGAGGAAGAGGAGGATGACG
AATGGGGTGTGGCACCGAAGCCTACGGAGCAATTGTACCTAGGGAACCGC
AAAGCCAGGGAGTTGATGTGAGTTCGTTTCTTGAATCCACGCGGGTTATA
AATGTGAGGGCATGCTTCCTTTATTCAATGCATGTTTAATGTATCGTCAT
CGTTTTGTGGTGCTTGGGATTGCCCTTTTCCCTGCACCTCGCTTGTTTAA
CAGTGGTGGAGCTTACGCCGACGTCAACCTTGCAGTAAAAGTTGCGCACG
ACGACACCAAGTAAGGGAACTTTTGGGGTGGTTTGGTAGCAATAGGGGTG
AGATCCACCCTTGTTAACATACTCTCAACCCCGGTGCGCCGTCCGTCATC
CTCCCTTCCATGGCGTTCACCCCCCTCTTCGTTCCGTGGCTTCCTCCCCT
CCTTCCTCCTTTCTCCTCTTGTTGCAGGGCCGTCTTTCATGACGTTCGGA
AGAAGGCTGTTTCGGCGGCCGCATCCGAGGCCTCCCCAGCAGCTCCTGTC
GAACCCTCTCCTCCGCCCGCCCCCGAACCAGCCCCGACCGCCCAACCAGG
GTGCGTATATCGTGGTGTTCAGGATGTCGCCTTTTCTAAGAATCTCCCCT
TAATCGATTATCATATCCTCCTTGGCATTTATTGCTCGCTCTCATCCCCC
CTCTTCTCGTCCCCTTCGCCCTTCTTGCCGGTCTCGTTGCTCCCCCCCGA
CCGATCGGACAGGCGCTGGCGCTCCCGCCGGGTCCTGGCTGAACAAGGAT
TGATCCCTCCTCCCCTTGATAGCGGCAGCAACAGCTCCAGCAAAGAAAAC
GCCACCGCTACCGAAGCCTTCCCCGCGCTATCCGGCTTTCCCTCCCTAGG
TCCTGCCCGGGCGGCTGGGCCTTCGCCCGTCGTGGCGGCCGGAAGGTGGG
GCCAGGTGGCAGACACATCCTCGTCGAGGACGACAGGCCAGAAGATTGAA
AAGGAGGGCGGGGTCACGCCAGCACCCGCGGGCACGGCGTCGGAGGGGGC
AAAAATAGAATCGGAAGGTCCCCTCGCGGCGCCTCCCTCAGCATCCAACG
CTGTCCTGAGTACTCCAAGCTCCCAGGGAAAGGAAAAAGAATCAACATTT
GTCGCTCCCACAGTGACGGGGGCGACGGAGAGCTTAAATGTCCAGGATAG
CAGCGTTGGGGTCAGGCAGGAAAAAGTAGAGGGAAACGTTGCTGTTGATG
TTATAGCGGAGGGGGTGGCTACGGTCGATTTGAAAAGCAAGTTTGGAACC
AAGAAGAAGAAGAAGAAGCACATTGACATCGATGCATGAAGAGGATAGCA
AATCGATGGTTGCCTGGAGTTACATAACAGGCGTAGGAAGTAGAGTTTGA
GGAGGCCCTCAATTTTGGTCGGTCACATTTCGGATGGATGGAGGTGCATA
CATATTAAACTCTTTAAAGCAAAGATGTCTGGTCTCCAATTAATTCGGAG
AGGTGATGGAGCATTTTTGGCATCTTACTTATTAGCGTTTGATGTTTTCA
TTCAATTTTTTGATACAGGTAAAGAATCACTTAAAGTTTTCTTCAGATCC
CTGCAAACAATACATACAACCTATACAAAAGCCGTGCTACATTGAGTTGG
ACTACAAGCAGTTTGAGTTTGATCAACGATCAACGAGAGTAGAGACAATG
TGCTGATCACCATCTTTTGTGCAGCATCTTTGAAAAACATGTACGCCAAC
CTCCCC back to topCoding sequence (CDS) from alignment at CM002466.1:778179..780534- >rna5764 ID=rna5764|Name=rna5764|organism=Nannochloropsis gaditana|type=CDS|length=5430bp|location=Sequence derived from alignment at CM002466.1:778179..780534- (Nannochloropsis gaditana)
GGCCGTCTTTCATGACGTTCGGAAGAAGGCTGTTTCGGCGGCCGCATCCG
AGGCCTCCCCAGCAGCTCCTGTCGAACCCTCTCCTCCGCCCGCCCCCGAA
CCAGCCCCGACCGCCCAACCAGGGTGCGTATATCGTGGTGTTCAGGATGT
CGCCTTTTCTAAGAATCTCCCCTTAATCGATTATCATATCCTCCTTGGCA
TTTATTGCTCGCTCTCATCCCCCCTCTTCTCGTCCCCTTCGCCCTTCTTG
CCGGTCTCGTTGCTCCCCCCCGACCGATCGGACAGGCGCTGGCGCTCCCG
CCGGGTCCTGGCTGAACAAGGATTGATCCCTCCTCCCCTTGATAGCGGCA
GCAACAGCTCCAGCAAAGAAAACGCCACCGCTACCGAAGCCTTCCCCGCG
CTATCCGGCTTTCCCTCCCTAGGTCCTGCCCGGGCGGCTGGGCCTTCGCC
CGTCGTGGCGGCCGGAAGGTGGGGCCAGGTGGCAGACACATCCTCGTCGA
GGACGACAGGCCAGAAGATTGAAAAGGAGGGCGGGGTCACGCCAGCACCC
GCGGGCACGGCGTCGGAGGGGGCAAAAATAGAATCGGAAGGTCCCCTCGC
GGCGCCTCCCTCAGCATCCAACGCTGTCCTGAGTACTCCAAGCTCCCAGG
GAAAGGAAAAAGAATCAACATTTGTCGCTCCCACAGTGACGGGGGCGACG
GAGAGCTTAAATGTCCAGGATAGCAGCGTTGGGGTCAGGCAGGAAAAAGT
AGAGGGAAACGTTGCTGTTGATGTTATAGCGGAGGGGGTGGCTACGGTCG
ATTTGAAAAGCAAGTTTGGAACCAAGAAGAAGAAGAAGAAGCACATTGAC
ATCGATGCATGATGGTGGAGCTTACGCCGACGTCAACCTTGCAGTAAAAG
TTGCGCACGACGACACCAAAACAGCCGAGGAAGAGGAGGATGACGAATGG
GGTGTGGCACCGAAGCCTACGGAGCAATTGTACCTAGGGAACCGCAAAGC
CAGGGAGTTGATGCCAAGGCTAAAACCGAACCAGTGAAGCCATGTCGGAT
GTCAAATCTTTGTTCCGCAAAAAAACCAAGCAAGCGGGCCGTCTTTCATG
ACGTTCGGAAGAAGGCTGTTTCGGCGGCCGCATCCGAGGCCTCCCCAGCA
GCTCCTGTCGAACCCTCTCCTCCGCCCGCCCCCGAACCAGCCCCGACCGC
CCAACCAGGGTGCGTATATCGTGGTGTTCAGGATGTCGCCTTTTCTAAGA
ATCTCCCCTTAATCGATTATCATATCCTCCTTGGCATTTATTGCTCGCTC
TCATCCCCCCTCTTCTCGTCCCCTTCGCCCTTCTTGCCGGTCTCGTTGCT
CCCCCCCGACCGATCGGACAGGCGCTGGCGCTCCCGCCGGGTCCTGGCTG
AACAAGGATTGATCCCTCCTCCCCTTGATAGCGGCAGCAACAGCTCCAGC
AAAGAAAACGCCACCGCTACCGAAGCCTTCCCCGCGCTATCCGGCTTTCC
CTCCCTAGGTCCTGCCCGGGCGGCTGGGCCTTCGCCCGTCGTGGCGGCCG
GAAGGTGGGGCCAGGTGGCAGACACATCCTCGTCGAGGACGACAGGCCAG
AAGATTGAAAAGGAGGGCGGGGTCACGCCAGCACCCGCGGGCACGGCGTC
GGAGGGGGCAAAAATAGAATCGGAAGGTCCCCTCGCGGCGCCTCCCTCAG
CATCCAACGCTGTCCTGAGTACTCCAAGCTCCCAGGGAAAGGAAAAAGAA
TCAACATTTGTCGCTCCCACAGTGACGGGGGCGACGGAGAGCTTAAATGT
CCAGGATAGCAGCGTTGGGGTCAGGCAGGAAAAAGTAGAGGGAAACGTTG
CTGTTGATGTTATAGCGGAGGGGGTGGCTACGGTCGATTTGAAAAGCAAG
TTTGGAACCAAGAAGAAGAAGAAGAAGCACATTGACATCGATGCATGATG
GTGGAGCTTACGCCGACGTCAACCTTGCAGTAAAAGTTGCGCACGACGAC
ACCAAAACAGCCGAGGAAGAGGAGGATGACGAATGGGGTGTGGCACCGAA
GCCTACGGAGCAATTGTACCTAGGGAACCGCAAAGCCAGGGAGTTGATGC
CAAGGCTAAAACCGAACCAGTGAAGCCATGTCGGATGTCAAATCTTTGTT
CCGCAAAAAAACCAAGCAAGCGGGCCGTCTTTCATGACGTTCGGAAGAAG
GCTGTTTCGGCGGCCGCATCCGAGGCCTCCCCAGCAGCTCCTGTCGAACC
CTCTCCTCCGCCCGCCCCCGAACCAGCCCCGACCGCCCAACCAGGGTGCG
TATATCGTGGTGTTCAGGATGTCGCCTTTTCTAAGAATCTCCCCTTAATC
GATTATCATATCCTCCTTGGCATTTATTGCTCGCTCTCATCCCCCCTCTT
CTCGTCCCCTTCGCCCTTCTTGCCGGTCTCGTTGCTCCCCCCCGACCGAT
CGGACAGGCGCTGGCGCTCCCGCCGGGTCCTGGCTGAACAAGGATTGATC
CCTCCTCCCCTTGATAGCGGCAGCAACAGCTCCAGCAAAGAAAACGCCAC
CGCTACCGAAGCCTTCCCCGCGCTATCCGGCTTTCCCTCCCTAGGTCCTG
CCCGGGCGGCTGGGCCTTCGCCCGTCGTGGCGGCCGGAAGGTGGGGCCAG
GTGGCAGACACATCCTCGTCGAGGACGACAGGCCAGAAGATTGAAAAGGA
GGGCGGGGTCACGCCAGCACCCGCGGGCACGGCGTCGGAGGGGGCAAAAA
TAGAATCGGAAGGTCCCCTCGCGGCGCCTCCCTCAGCATCCAACGCTGTC
CTGAGTACTCCAAGCTCCCAGGGAAAGGAAAAAGAATCAACATTTGTCGC
TCCCACAGTGACGGGGGCGACGGAGAGCTTAAATGTCCAGGATAGCAGCG
TTGGGGTCAGGCAGGAAAAAGTAGAGGGAAACGTTGCTGTTGATGTTATA
GCGGAGGGGGTGGCTACGGTCGATTTGAAAAGCAAGTTTGGAACCAAGAA
GAAGAAGAAGAAGCACATTGACATCGATGCATGATGGTGGAGCTTACGCC
GACGTCAACCTTGCAGTAAAAGTTGCGCACGACGACACCAAAACAGCCGA
GGAAGAGGAGGATGACGAATGGGGTGTGGCACCGAAGCCTACGGAGCAAT
TGTACCTAGGGAACCGCAAAGCCAGGGAGTTGATGCCAAGGCTAAAACCG
AACCAGTGAAGCCATGTCGGATGTCAAATCTTTGTTCCGCAAAAAAACCA
AGCAAGCGGGCCGTCTTTCATGACGTTCGGAAGAAGGCTGTTTCGGCGGC
CGCATCCGAGGCCTCCCCAGCAGCTCCTGTCGAACCCTCTCCTCCGCCCG
CCCCCGAACCAGCCCCGACCGCCCAACCAGGGTGCGTATATCGTGGTGTT
CAGGATGTCGCCTTTTCTAAGAATCTCCCCTTAATCGATTATCATATCCT
CCTTGGCATTTATTGCTCGCTCTCATCCCCCCTCTTCTCGTCCCCTTCGC
CCTTCTTGCCGGTCTCGTTGCTCCCCCCCGACCGATCGGACAGGCGCTGG
CGCTCCCGCCGGGTCCTGGCTGAACAAGGATTGATCCCTCCTCCCCTTGA
TAGCGGCAGCAACAGCTCCAGCAAAGAAAACGCCACCGCTACCGAAGCCT
TCCCCGCGCTATCCGGCTTTCCCTCCCTAGGTCCTGCCCGGGCGGCTGGG
CCTTCGCCCGTCGTGGCGGCCGGAAGGTGGGGCCAGGTGGCAGACACATC
CTCGTCGAGGACGACAGGCCAGAAGATTGAAAAGGAGGGCGGGGTCACGC
CAGCACCCGCGGGCACGGCGTCGGAGGGGGCAAAAATAGAATCGGAAGGT
CCCCTCGCGGCGCCTCCCTCAGCATCCAACGCTGTCCTGAGTACTCCAAG
CTCCCAGGGAAAGGAAAAAGAATCAACATTTGTCGCTCCCACAGTGACGG
GGGCGACGGAGAGCTTAAATGTCCAGGATAGCAGCGTTGGGGTCAGGCAG
GAAAAAGTAGAGGGAAACGTTGCTGTTGATGTTATAGCGGAGGGGGTGGC
TACGGTCGATTTGAAAAGCAAGTTTGGAACCAAGAAGAAGAAGAAGAAGC
ACATTGACATCGATGCATGATGGTGGAGCTTACGCCGACGTCAACCTTGC
AGTAAAAGTTGCGCACGACGACACCAAAACAGCCGAGGAAGAGGAGGATG
ACGAATGGGGTGTGGCACCGAAGCCTACGGAGCAATTGTACCTAGGGAAC
CGCAAAGCCAGGGAGTTGATGCCAAGGCTAAAACCGAACCAGTGAAGCCA
TGTCGGATGTCAAATCTTTGTTCCGCAAAAAAACCAAGCAAGCGGGCCGT
CTTTCATGACGTTCGGAAGAAGGCTGTTTCGGCGGCCGCATCCGAGGCCT
CCCCAGCAGCTCCTGTCGAACCCTCTCCTCCGCCCGCCCCCGAACCAGCC
CCGACCGCCCAACCAGGGTGCGTATATCGTGGTGTTCAGGATGTCGCCTT
TTCTAAGAATCTCCCCTTAATCGATTATCATATCCTCCTTGGCATTTATT
GCTCGCTCTCATCCCCCCTCTTCTCGTCCCCTTCGCCCTTCTTGCCGGTC
TCGTTGCTCCCCCCCGACCGATCGGACAGGCGCTGGCGCTCCCGCCGGGT
CCTGGCTGAACAAGGATTGATCCCTCCTCCCCTTGATAGCGGCAGCAACA
GCTCCAGCAAAGAAAACGCCACCGCTACCGAAGCCTTCCCCGCGCTATCC
GGCTTTCCCTCCCTAGGTCCTGCCCGGGCGGCTGGGCCTTCGCCCGTCGT
GGCGGCCGGAAGGTGGGGCCAGGTGGCAGACACATCCTCGTCGAGGACGA
CAGGCCAGAAGATTGAAAAGGAGGGCGGGGTCACGCCAGCACCCGCGGGC
ACGGCGTCGGAGGGGGCAAAAATAGAATCGGAAGGTCCCCTCGCGGCGCC
TCCCTCAGCATCCAACGCTGTCCTGAGTACTCCAAGCTCCCAGGGAAAGG
AAAAAGAATCAACATTTGTCGCTCCCACAGTGACGGGGGCGACGGAGAGC
TTAAATGTCCAGGATAGCAGCGTTGGGGTCAGGCAGGAAAAAGTAGAGGG
AAACGTTGCTGTTGATGTTATAGCGGAGGGGGTGGCTACGGTCGATTTGA
AAAGCAAGTTTGGAACCAAGAAGAAGAAGAAGAAGCACATTGACATCGAT
GCATGATGGTGGAGCTTACGCCGACGTCAACCTTGCAGTAAAAGTTGCGC
ACGACGACACCAAAACAGCCGAGGAAGAGGAGGATGACGAATGGGGTGTG
GCACCGAAGCCTACGGAGCAATTGTACCTAGGGAACCGCAAAGCCAGGGA
GTTGATGCCAAGGCTAAAACCGAACCAGTGAAGCCATGTCGGATGTCAAA
TCTTTGTTCCGCAAAAAAACCAAGCAAGCG back to top
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