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Properties
| Property Name | Value |
|---|
| Product | ring zinc finger-containing protein |
| Orig transcript id | gnl|cribi|Naga_101557g1.208.mrna |
| Orig protein id | gnl|cribi|Naga_101557g1.208 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:771999..774243 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5760 ID=rna5760|Name=rna5760|organism=Nannochloropsis gaditana|type=mRNA|length=1426bp
CCCCTCTCCCTCGCTCCCGCCCTCGACGCCCCCCGTGCCTCTGCCGAAGA
CTTTTTCCACGTCTTTATCGATCAACCCCACTGGCTTAGGACCTTTTTGG
AGGGGGTCATACGGGAACCGCCCCCGCCCCCCCTGCCTCCGGCCTCCACA
GCCCCCCCTACCTTAGTTAGCAGAGGCGGTTATGCCCGCCCTTCCCCCCT
CCCCACCCCGTCCCCCCCCTTATTGGTGGGTAACACCCTTCTGGAGCTCC
TGCTCCTTGACTGGAAACAGGCGGTAGAGGATGCCACGGCCCGGGGGAGG
GAGGGAGGGAAGGAGGGGGGGGCAAGTAAGCCGCGCGGGCCCAGTGGTGG
AGCTATTGAGGGCGCAATGAATAGGAAGGGAGGCGGACATGGAGGGGAAG
GAGAGAAGGAACGTCGGAAAGAGGCACGGCTTCGCGCCAAAAAAGCGGAG
AGCAGCCTTTTATCCTTTTTGGAGGAGCAGCAAGGTCGCTACAATGAAGA
CCAGGCTTTGATACTGGTGCAGATGCATAATTTCCGACCAGGGCAGCTCT
GTCTTCTGGAGCGGCAGCGGCAAGTTGAGCTCGTGCTGGAGGCCTACATG
GAGGAAGGAGAGGTGGGCTTGGTCTTGCAGCGAATGTGTCGGAAAGAGAA
CCGAAAGAACGCAGAGCTCTGGAGGAAGGTGCTGGCTTGGATTGTGGGGA
GGGCGGGAGGGAGGGCGGGAGGCAGGGCGGGAAGGAAGGGGGCGGCGGCG
GAGGAGGAAGCAGGCGAGGACGAGGAGGAGGGGGAAGAGGAAAGCGAGGA
CGAAGACGCGGCATGGGACGACGTGGTGCGTGTCTTGCAGATGATCGAGC
GAGAACACGTCCTTCCCCCACCCGTGGTCCTCGAGGCGCTCTCCCAGCAC
GAACAGCTCCCCCTCTCCGTGGCGCGTACCTACATCGTCCGTCTCCTCAA
AGAGGCGGACGGAGACCTGCAGAGCCACCAGGCCAACATCGAGTCCCTCC
GAAAGAGCACCCACGAGAAACGCGCCGAGGTTCAGGACCTCCGGACCTCG
GCCCGCCTCTTCCAGAGCACCACGTGCGCGGCCTGCCAGCGACCGTTGGA
GCTCCCTGCGGTCCACTTCCTGTGCATGCATTCGTACCACCTGGATCCCG
GGTGTCTGGCACAGGAGGGAGAGTGCAACGAGTGCGCGGCCGACCAGCAC
CACTACGAGCGGATCCAGCTCAAGGATCAAAGAGGCAAAGCTACGGAGCA
CGAATCGTTCTTCACAGAACTAGAGGAGCATGGATTTGCGGCCGTCGCGT
CCTACTTCGGGAAAGGGGTTTTGAACGTGTAGAATGAAAGGGCCGCACCG
TGTCATAGGCACGGACTCTTCCACCAAGGCAAAGATGCATTTTCCTCCAA
AGTCCATTTATCGATATTGTAGATGT back to topprotein sequence of rna5760 >rna5760-protein ID=rna5760-protein|Name=rna5760|organism=Nannochloropsis gaditana|type=polypeptide|length=281bp
MKLFPVAIKLAYSCNYPLAQIMEIYRRYADHLYEKKRAYDESVQQYIHTI
GYLDPSYVIARFLDPQRIHNLTVYLEALHRQGHATAALTTFLLNCYTKLK
DTARLDRLVFPERYVGGEGEGEEGEEGEEGGERGEGSRPYLPAGLSLLPA
EEVETVGGMEGEQGGGKERQEPEGESLNTAMGRVRRRRGGVDVQAAVSIL
KEAGYFEHALEIARKYRAHEWYLRVQLEKPSPSYRDALAYITSLSFPDAA
RFLSLYGQRLLAVLPEETTGTLLALCTGRFP back to topmRNA from alignment at CM002466.1:771999..774243- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5760 ID=rna5760|Name=rna5760|organism=Nannochloropsis gaditana|type=mRNA|length=2245bp|location=Sequence derived from alignment at CM002466.1:771999..774243- (Nannochloropsis gaditana)
GAGGGAGGGGGATGTCTCTAGCCAGGAAGGGGGCGGGAAAAACGGGAAAA
GCGGACAGGCCGCGGGCCCAAGCCGCAACCCGGACTTGGACAAGCTGTAC
GTGGTGCTGGACGATGCCCCCCCCCCCTCTACCTCCAAGGGGGGGACTGC
TTCGGCCTCTCCCCTCTCTCCCTCCTCCCTTCCCTCCAGCGCCATGCCTG
CAGCCCCCTCCCTCCCCACAGACAGCACCCCCTTCCCCTCCGCCTTGCTC
TCCCCCTTCCTGACTGCCCCTTCCTCCGGCTCGGGGGGGGGTCTTCCTCT
TCGACACCGCCTCCTCCCCGCCAACCTTCTCCCTCCTCGTCCTCGACCAA
TTCGGTGCCTCATACGGCTGCGCGGCCCTCGACCCCCTCACCCAGGACCT
TCTCCTCGGCCGCCCCGACGCCCTCTACTTCTACAGCGAGCACGACGGCC
GGAAGGGGGCTCTCGGCTTTCAAATCCATCAGCGTCTCGCTGCCCTCGGT
CCCTCCCCCTCCTCCAACCCCTCCTCCTCCTCCTCCTCTTCCTCGTCCTC
CTCCTCCTCCTCCGTCCTCGTCGCCTCCAGGGATGAGGTCTCGGGCCGTA
CCACCCTCCACATTTACGATCTCAAGAACAAATTCGTGGCTTTTCACACC
ACCCTCGCTCCCGATCAGAAGGTCCTCGCCCTCCTCTCCCACCGCTCCCT
CGCCTACGTCCTCACCTCCCAAGGACTGGTCCTCCGCTTGCGTGAGAAGA
CCACCGCGGCCAAGCTCAAGCTCCTGGTCCAGGACATGAAGGTTGGAAAG
CCTTGTGTCTCGCGTCTTTCCCTCCTTGTTCCCTTCTCTCGTCCCGTCGG
CCTTTACTCATCGAGGACGCGGCCCGAAGCCCTTCTGGTCATGCTCCCCT
CGTCGCATTCCCCCTCGTGCCTCCCCTCACCCGCATCCCTCCCTTGCCCT
CCCCACGTCCTAGCTCTTCCCCGTGGCCATCAAGCTTGCCTATTCCTGCA
ACTACCCTCTGGCTCAGATCATGGAGATTTACCGAAGATACGCAGACCAT
TTGTACGAAAAGAAGCGGGCTTACGACGAAAGTGTGCAGCAGTACATCCA
CACGATCGGTAGGCAGGGAGAGAGGGAGGAAAGGGGAAGGGAGCCCAGCA
TGACAGAGGGCTTTCTCTTCGTAAATCCTGTGGTGCGAGGGTAAGGCCGT
TGGTTGTCTCCGGGCACGCCCGGCCAATCTGAAGCTTTGTTTTGTTTTCG
GGCGAGGACAGCGAGTCCAGGACTTCATCATGCAACCGATAACTTTGCTA
CCACCCCCCAGGCTACTTGGATCCCTCCTACGTCATCGCCCGTTTCCTCG
ACCCGCAGCGCATCCACAATTTGACGGTCTACCTGGAGGCTTTGCACCGA
CAGGGGCATGCCACGGCCGCCCTGACCACCTTCCTCTTGAACTGTTACAC
GAAGTTGAAGGACACCGCCAGGTTGGATCGCTTGGTTTTTCCAGAGAGAT
ACGTGGGGGGGGAGGGGGAGGGGGAGGAAGGGGAGGAGGGGGAGGAGGGG
GGGGAAAGAGGGGAAGGAAGCAGACCCTACCTTCCCGCAGGCTTGTCACT
GCTTCCCGCGGAGGAGGTAGAAACGGTGGGAGGGATGGAAGGGGAGCAGG
GGGGAGGGAAGGAGAGGCAGGAGCCCGAGGGGGAGAGCCTGAATACGGCC
ATGGGCCGGGTGCGGCGCCGGCGGGGAGGCGTGGATGTCCAAGCGGCCGT
GAGCATACTGAAGGAAGCAGGGTATTTCGAGCACGCGCTGGAGATAGCTA
GGAAGTACCGGTGAGATCCTATGGCTCGAGGGAGTCAGGAATGCGAGGCA
TCGTGTCTTCTTTCAAAAAAGGGAGGTCGGCGAGACATGGGCCGGCGTTC
CGCGGTGGCACGCCTCGAAGAGCGCGTCGAGGGATAGGGAGGACGTGTCC
ATTCCTGAACCGTGACAAGACCACTTTGCAAATTCTAAGCCCATCTTACT
GACCCTCTTGGTCTCGCTCCTTCCCTCCCTTCCTCCCGTTCCTTCTCATC
CAGCGCGCACGAATGGTATTTGCGGGTACAGCTTGAAAAGCCCTCGCCCT
CCTACCGCGACGCGCTTGCCTACATCACCTCCCTCTCCTTCCCGGACGCT
GCCCGCTTCCTTTCCCTCTATGGCCAGCGCCTCCTCGCGGTCCTACCGGA
GGAGACCACCGGCACCCTCCTTGCCCTCTGCACCGGCCGTTTCCC back to topCoding sequence (CDS) from alignment at CM002466.1:771999..774243- >rna5760 ID=rna5760|Name=rna5760|organism=Nannochloropsis gaditana|type=CDS|length=3368bp|location=Sequence derived from alignment at CM002466.1:771999..774243- (Nannochloropsis gaditana)
CGCGCACGAATGGTATTTGCGGGTACAGCTTGAAAAGCCCTCGCCCTCCT
ACCGCGACGCGCTTGCCTACATCACCTCCCTCTCCTTCCCGGACGCTGCC
CGCTTCCTTTCCCTCTATGGCCAGCGCCTCCTCGCGGTCCTACCGGAGGA
GACCACCGGCACCCTCCTTGCCCTCTGCACCGGCCGTTTCCCGCTACTTG
GATCCCTCCTACGTCATCGCCCGTTTCCTCGACCCGCAGCGCATCCACAA
TTTGACGGTCTACCTGGAGGCTTTGCACCGACAGGGGCATGCCACGGCCG
CCCTGACCACCTTCCTCTTGAACTGTTACACGAAGTTGAAGGACACCGCC
AGGTTGGATCGCTTGGTTTTTCCAGAGAGATACGTGGGGGGGGAGGGGGA
GGGGGAGGAAGGGGAGGAGGGGGAGGAGGGGGGGGAAAGAGGGGAAGGAA
GCAGACCCTACCTTCCCGCAGGCTTGTCACTGCTTCCCGCGGAGGAGGTA
GAAACGGTGGGAGGGATGGAAGGGGAGCAGGGGGGAGGGAAGGAGAGGCA
GGAGCCCGAGGGGGAGAGCCTGAATACGGCCATGGGCCGGGTGCGGCGCC
GGCGGGGAGGCGTGGATGTCCAAGCGGCCGTGAGCATACTGAAGGAAGCA
GGGTATTTCGAGCACGCGCTGGAGATAGCTAGGAAGTACCGCTCTTCCCC
GTGGCCATCAAGCTTGCCTATTCCTGCAACTACCCTCTGGCTCAGATCAT
GGAGATTTACCGAAGATACGCAGACCATTTGTACGAAAAGAAGCGGGCTT
ACGACGAAAGTGTGCAGCAGTACATCCACACGATCGATGAAGCGCGCACG
AATGGTATTTGCGGGTACAGCTTGAAAAGCCCTCGCCCTCCTACCGCGAC
GCGCTTGCCTACATCACCTCCCTCTCCTTCCCGGACGCTGCCCGCTTCCT
TTCCCTCTATGGCCAGCGCCTCCTCGCGGTCCTACCGGAGGAGACCACCG
GCACCCTCCTTGCCCTCTGCACCGGCCGTTTCCCGCTACTTGGATCCCTC
CTACGTCATCGCCCGTTTCCTCGACCCGCAGCGCATCCACAATTTGACGG
TCTACCTGGAGGCTTTGCACCGACAGGGGCATGCCACGGCCGCCCTGACC
ACCTTCCTCTTGAACTGTTACACGAAGTTGAAGGACACCGCCAGGTTGGA
TCGCTTGGTTTTTCCAGAGAGATACGTGGGGGGGGAGGGGGAGGGGGAGG
AAGGGGAGGAGGGGGAGGAGGGGGGGGAAAGAGGGGAAGGAAGCAGACCC
TACCTTCCCGCAGGCTTGTCACTGCTTCCCGCGGAGGAGGTAGAAACGGT
GGGAGGGATGGAAGGGGAGCAGGGGGGAGGGAAGGAGAGGCAGGAGCCCG
AGGGGGAGAGCCTGAATACGGCCATGGGCCGGGTGCGGCGCCGGCGGGGA
GGCGTGGATGTCCAAGCGGCCGTGAGCATACTGAAGGAAGCAGGGTATTT
CGAGCACGCGCTGGAGATAGCTAGGAAGTACCGCTCTTCCCCGTGGCCAT
CAAGCTTGCCTATTCCTGCAACTACCCTCTGGCTCAGATCATGGAGATTT
ACCGAAGATACGCAGACCATTTGTACGAAAAGAAGCGGGCTTACGACGAA
AGTGTGCAGCAGTACATCCACACGATCGATGAAGCGCGCACGAATGGTAT
TTGCGGGTACAGCTTGAAAAGCCCTCGCCCTCCTACCGCGACGCGCTTGC
CTACATCACCTCCCTCTCCTTCCCGGACGCTGCCCGCTTCCTTTCCCTCT
ATGGCCAGCGCCTCCTCGCGGTCCTACCGGAGGAGACCACCGGCACCCTC
CTTGCCCTCTGCACCGGCCGTTTCCCGCTACTTGGATCCCTCCTACGTCA
TCGCCCGTTTCCTCGACCCGCAGCGCATCCACAATTTGACGGTCTACCTG
GAGGCTTTGCACCGACAGGGGCATGCCACGGCCGCCCTGACCACCTTCCT
CTTGAACTGTTACACGAAGTTGAAGGACACCGCCAGGTTGGATCGCTTGG
TTTTTCCAGAGAGATACGTGGGGGGGGAGGGGGAGGGGGAGGAAGGGGAG
GAGGGGGAGGAGGGGGGGGAAAGAGGGGAAGGAAGCAGACCCTACCTTCC
CGCAGGCTTGTCACTGCTTCCCGCGGAGGAGGTAGAAACGGTGGGAGGGA
TGGAAGGGGAGCAGGGGGGAGGGAAGGAGAGGCAGGAGCCCGAGGGGGAG
AGCCTGAATACGGCCATGGGCCGGGTGCGGCGCCGGCGGGGAGGCGTGGA
TGTCCAAGCGGCCGTGAGCATACTGAAGGAAGCAGGGTATTTCGAGCACG
CGCTGGAGATAGCTAGGAAGTACCGCTCTTCCCCGTGGCCATCAAGCTTG
CCTATTCCTGCAACTACCCTCTGGCTCAGATCATGGAGATTTACCGAAGA
TACGCAGACCATTTGTACGAAAAGAAGCGGGCTTACGACGAAAGTGTGCA
GCAGTACATCCACACGATCGATGAAGCGCGCACGAATGGTATTTGCGGGT
ACAGCTTGAAAAGCCCTCGCCCTCCTACCGCGACGCGCTTGCCTACATCA
CCTCCCTCTCCTTCCCGGACGCTGCCCGCTTCCTTTCCCTCTATGGCCAG
CGCCTCCTCGCGGTCCTACCGGAGGAGACCACCGGCACCCTCCTTGCCCT
CTGCACCGGCCGTTTCCCGCTACTTGGATCCCTCCTACGTCATCGCCCGT
TTCCTCGACCCGCAGCGCATCCACAATTTGACGGTCTACCTGGAGGCTTT
GCACCGACAGGGGCATGCCACGGCCGCCCTGACCACCTTCCTCTTGAACT
GTTACACGAAGTTGAAGGACACCGCCAGGTTGGATCGCTTGGTTTTTCCA
GAGAGATACGTGGGGGGGGAGGGGGAGGGGGAGGAAGGGGAGGAGGGGGA
GGAGGGGGGGGAAAGAGGGGAAGGAAGCAGACCCTACCTTCCCGCAGGCT
TGTCACTGCTTCCCGCGGAGGAGGTAGAAACGGTGGGAGGGATGGAAGGG
GAGCAGGGGGGAGGGAAGGAGAGGCAGGAGCCCGAGGGGGAGAGCCTGAA
TACGGCCATGGGCCGGGTGCGGCGCCGGCGGGGAGGCGTGGATGTCCAAG
CGGCCGTGAGCATACTGAAGGAAGCAGGGTATTTCGAGCACGCGCTGGAG
ATAGCTAGGAAGTACCGCTCTTCCCCGTGGCCATCAAGCTTGCCTATTCC
TGCAACTACCCTCTGGCTCAGATCATGGAGATTTACCGAAGATACGCAGA
CCATTTGTACGAAAAGAAGCGGGCTTACGACGAAAGTGTGCAGCAGTACA
TCCACACGATCGATGAAG back to top
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