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Properties
| Property Name | Value |
|---|
| Product | lipid droplet surface protein |
| Orig transcript id | gnl|cribi|Naga_100086g4.3841.mrna |
| Orig protein id | gnl|cribi|Naga_100086g4.3841 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:766694..767577 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5756 ID=rna5756|Name=rna5756|organism=Nannochloropsis gaditana|type=mRNA|length=1663bp
TCACCATGGCTGTCGTTTCCAATAAGGTGGGCGGCAGCAAGCGGAAAGTG
ACCTCCCCACCCTCCGCCATTACTGCTCGCACAAACCCGAAAAAAAGCAA
CACGTTGAGCAAAACAGATGAAGCTCAAACGACGGCCGACAAGCTTACTT
TGCCTCCAAGCCGCGTCGATGCCACTCAGGCCACTCGTGCCGTGGAGGCA
TTACTGCAACATAATGCTCGGCACCAGGCTCTTGTAGCAAGCAAAAAATC
CAAACAGGACCTCTTAGCGTCCGAGGCAGGCGATTACATATTGATACAGA
TAGCGCTTGCCAAAATTCCTGAACGTGTGAGTCCCAAGCCGGTGCCTTTA
TCATTGCCCCACCCCCTCCACGGTAGCGGCGGCGACGACGATGAAGACCA
TGCCGTGTGCTTGATAGTAAAAGAATCGGACAAGGGTAAAGTTCAACGCG
CGTTGAATGCGATGAAAATGGACGGCGTGCGTGAAGTCGTGGGATTGCAG
GAGCTGAGAACGGACTATAAGGAGTTCCAAGAGCGGCGACAGCTCCGGGA
CGCCTTCGACTTGTTCCTGGTGGATGACCGCATCTTGCCCCTCCTGGGAA
AGGCGCTCGGCAAGACTTTCTTTTCGAAGAAGAAACATCCCGTGGCCCTC
AAACTTGGTGGCCTGTTGAGCAGCAACCCGCAGGCCATGGCCACTGTGGG
AAAACGGATTATCGCGGCACAGCAACGTACACACTTGTACAGAAATCACG
GGAATTGCCTGAGCGTGAAGGTGGCCAAGACAAGCTTCAGACCCGCGGAG
GCGGTTGCCAACGTCTTGGCCGGTATTGAGGCGGCCGTAGAGGCGACGCC
GGGGAAATGGAAGAATGTGATGGCCATCTCGGTCAAGACAAGCTCCTCGG
TGGCACTCCCTCTCTACCAGCGCCTGCCCCAGTACCTGATCAAGAAGCCG
GGCGCGCTGGGGATCGGACAGGCGGTACATGCGCAGCTCGAGGGAAATGA
GCCGGGGGAGGAGGGGGAGGAAGGGGAGGGGAAACGTGCCTTGTTGACGG
TAAAAGCCTTGGAAAATCGTGGCAAAAAGCGAGGGCCCCCCGTGTCTGAG
GCGAAAGAGTCATCCGCCAAAAAGACGGGCCACAAGGGGAGCAGTTTGGC
TCCAAGGACAGACGCCGCCAAGAGCAGCCAACGAGGTTTACCTCTGGACC
CTAAAAGCAAGCTCTCAGGGGGAGAAATGAAAACCTCGGTCGTAACCAAG
GGGGCTATCGCCGAGTCGGGCGCCGCCAAGGTAGTGGGAGATGCGTCGGG
GAGGCCGAATCGGACAGGGGAGACGGTGGCCGCCGCGAAGAAACGGGCTC
GTCAGGAGGATGGGGCAGCGGCAGTAGCTTTGTTAGCGTCGCGTGCCCAG
ACAGGGGGTAAGATTAGGGGGGGAAAAGCGGAGGTAGAGAGTCTGGAGAC
GGGTCCTGTCCCGCGGAAGGGGAAGAAAGTGGTGGTGGCCGAATCTGAAG
GCAAAGGTAAGGCCAAGAAAAAGAATCGTATTTAAGTCACACGGGATGGG
GTTCAGGGATGTCACGTGGAAGAGTCCCTTGGACTGAAAGAGGAGAGGAA
GGCCATGCAATCTGCGTCACTTTACGGGGAAAGAAAAAAGTCAAATGCAA
GAGTGAGCCTTTC back to topprotein sequence of rna5756 >rna5756-protein ID=rna5756-protein|Name=rna5756|organism=Nannochloropsis gaditana|type=polypeptide|length=167bp
MASETLSQDKMAGPVMTSSSATTPVGTVKPFKQPFKAVATLSQKTGQITK
PIDPAISKTLDFVYSGYTSVKTQVDKAPKVNPYLLIAAGLFLSCVVSISL
LIPAILFFPVTIFLGIATSFALIALAPAFLIVAWVLISSAPMQDKVVVPT
LDKVLTNKKMAKILLKE back to topmRNA from alignment at CM002466.1:766694..767577+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5756 ID=rna5756|Name=rna5756|organism=Nannochloropsis gaditana|type=mRNA|length=884bp|location=Sequence derived from alignment at CM002466.1:766694..767577+ (Nannochloropsis gaditana)
ATGGCCTGTACGAGCAGTCCACACATTGATTTTTACCTGTTTGAATGCTG
GACCATTTCGTGTGTTGCACTTGACAGGATGTGGTTGTTTGGGTTGCTTG
CTGTTTTCCTGTGTACGGCGTCAGTCCGAATTAGGAATAGAATCTGATGC
CACGCACCCTCTCACGGCGCTCGCACTTTAATACATCGTATACAAACTAG
CAGAAACTCTATCTCAAGATAAGATGGCCGGCCCTGTAAtgacctcttct
tccgcaaCCACGCCCGTTGGCACCGTCAAACCTTTCAAGCAGCCTTTCAA
GGCTGTGGCTACACTGTCGCAGAAGACGGGCCAGATCACCAAGCCCATCG
ACCCTGCCATCTCCAAGACTCTGGATTTCGTCTACTCGGGCTACACTGTA
CGTACATCTGCCTTTTTGAATCGAGTTCCCTCGTGAATTGACTCGCTGGA
CCTAGCGAGAGACATGAACCGCACTGGCACATAAGCAGGGTTGAGATTAA
GACACATGGCGCGTTACTCATCAGTAAGAATAATAAAATCTCCCACATCG
GCTCGACCACCCGTTACTCCTTTCCCTGGCACAGAGCGTTAAGACTCAGG
TGGATAAGGCTCCCAAGGTGAACCCCTACCTCCTGATCGCtgccggcctc
ttcctctcctgcgtggtctccatctcccttctcattcccgccatcctctt
cttccccgtcacCATCTTCCTGGGGATCGCCACTTCCTTCGCGCTCATCG
CTTTGGCCCCCGCTTTCCTGATCGTGGCGTGGGTCCTGATCTCGTCTGCG
CCCATGCAGgacaaggtggtggtgccgaCCCTTGACAAGGTGCTCACGAA
CAAGAAGATGGCGAAGATCCTCCTCAAGGAGTAA back to topCoding sequence (CDS) from alignment at CM002466.1:766694..767577+ >rna5756 ID=rna5756|Name=rna5756|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002466.1:766694..767577+ (Nannochloropsis gaditana)
ATGGCCTCAGAAACTCTATCTCAAGATAAGATGGCCGGCCCTGTAAtgac
ctcttcttccgcaaCCACGCCCGTTGGCACCGTCAAACCTTTCAAGCAGC
CTTTCAAGGCTGTGGCTACACTGTCGCAGAAGACGGGCCAGATCACCAAG
CCCATCGACCCTGCCATCTCCAAGACTCTGGATTTCGTCTACTCGGGCTA
CACTAGCGTTAAGACTCAGGTGGATAAGGCTCCCAAGGTGAACCCCTACC
TCCTGATCGCtgccggcctcttcctctcctgcgtggtctccatctccctt
ctcattcccgccatcctcttcttccccgtcacCATCTTCCTGGGGATCGC
CACTTCCTTCGCGCTCATCGCTTTGGCCCCCGCTTTCCTGATCGTGGCGT
GGGTCCTGATCTCGTCTGCGCCCATGCAGgacaaggtggtggtgccgaCC
CTTGACAAGGTGCTCACGAACAAGAAGATGGCGAAGATCCTCCTCAAGGA
GTAAATGGCCTCAGAAACTCTATCTCAAGATAAGATGGCCGGCCCTGTAA
tgacctcttcttccgcaaCCACGCCCGTTGGCACCGTCAAACCTTTCAAG
CAGCCTTTCAAGGCTGTGGCTACACTGTCGCAGAAGACGGGCCAGATCAC
CAAGCCCATCGACCCTGCCATCTCCAAGACTCTGGATTTCGTCTACTCGG
GCTACACTAGCGTTAAGACTCAGGTGGATAAGGCTCCCAAGGTGAACCCC
TACCTCCTGATCGCtgccggcctcttcctctcctgcgtggtctccatctc
ccttctcattcccgccatcctcttcttccccgtcacCATCTTCCTGGGGA
TCGCCACTTCCTTCGCGCTCATCGCTTTGGCCCCCGCTTTCCTGATCGTG
GCGTGGGTCCTGATCTCGTCTGCGCCCATGCAGgacaaggtggtggtgcc
gaCCCTTGACAAGGTGCTCACGAACAAGAAGATGGCGAAGATCCTCCTCA
AGGAGTAAATGGCCTCAGAAACTCTATCTCAAGATAAGATGGCCGGCCCT
GTAAtgacctcttcttccgcaaCCACGCCCGTTGGCACCGTCAAACCTTT
CAAGCAGCCTTTCAAGGCTGTGGCTACACTGTCGCAGAAGACGGGCCAGA
TCACCAAGCCCATCGACCCTGCCATCTCCAAGACTCTGGATTTCGTCTAC
TCGGGCTACACTAGCGTTAAGACTCAGGTGGATAAGGCTCCCAAGGTGAA
CCCCTACCTCCTGATCGCtgccggcctcttcctctcctgcgtggtctcca
tctcccttctcattcccgccatcctcttcttccccgtcacCATCTTCCTG
GGGATCGCCACTTCCTTCGCGCTCATCGCTTTGGCCCCCGCTTTCCTGAT
CGTGGCGTGGGTCCTGATCTCGTCTGCGCCCATGCAGgacaaggtggtgg
tgccgaCCCTTGACAAGGTGCTCACGAACAAGAAGATGGCGAAGATCCTC
CTCAAGGAGTAA back to top
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