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Properties
| Property Name | Value |
|---|
| Product | signal peptidase complex catalytic subunit sec11c |
| Orig transcript id | gnl|cribi|Naga_100086g8.3842.mrna |
| Orig protein id | gnl|cribi|Naga_100086g8.3842 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:760992..763097 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5753 ID=rna5753|Name=rna5753|organism=Nannochloropsis gaditana|type=mRNA|length=2544bp
ATGCGGTTTGTTGCACTAGTTAGCGGCGGTAAGGACAGCGTTTTCAGCAT
TGCAAAATGCCTGGCTTACGGACATGAGCTCGTTGTTTTAGCAAACTTGT
TTCCTCCAGTCGATGGACCAGAGGAATTGGACTCTTTCATGTTTCAAAGC
GCGGGGTCGTCTGCCGTCGAGTGCCTTGCTGAATGTATAGGCGTGCCCAT
GGTAAGAGCTACCATGTCCGGTGCCAGTACCCACCAAGGCTTGCAGTACA
CGCCGACAGAAGGTGATGAAGTCGAAGATCTACATGCTTTGCTTTTTCGG
GTCAAACAACTTTATCCGGAGGTCGAGGCGGTATCAAGCGGTGCCGTCCT
TTCCACTTATCAACGGACACGAGTCGAGAGCGTCTGCGACCGACTGGGCT
TGCAGTCCCTGGCCTTTCTGTGGCAGTACGACCAATCACAGCTCTTAAAA
GAGATGACAGAATACGGTCTGGAGGCCGTTCTGGTCAAGGTTAGTTCTCA
GGGACTTGCTCCCCACAAACACCTGGGTAAATCAATAGCTGAGCTAGAGC
CGTTGTTCAAAAGATTGAACCGTCAGCATGGGTTTCATGTGGCGGGAGAA
GGGGGAGAATATGAAACGCTGGCTATAGATGCACCATTTTTCAAACGGCG
CTTGGTGCTAGATGATACGGAGGTTGTCATTCATTCGGACGACGTGTATA
CGCCCGTTGGGCTTTTGCACATCCACCGGTGCCATGCCGAGTTCAAGGAG
GAATCTTCGCCAACAGAAACATCAAAGGGTAATGAACCAAACAGATGCCT
CGTCCTCCCATTAGAAGTAGCGATCGTACGCTCCCTTGCGGACGGCGGGC
CTAGCACAAGCGCCGAAAGTCTCGGCAGTCAAGCGTGTGCCGTAGCCCCC
GGGAAGAGAGCCAGGAAATGGCGCATTCGCCCTCAGCCGCACGTATGGCG
GCAAGGGAGAGTTTTGAACATATCGGGGTACTGCGTACCCACACCACGGA
TCCATTTCCAGGGCGCGGACAGCTCCACGCATGGAGAGGCCGCTGGTCAA
ATGCGGCTCTGTCTTGAGGGAGTGCAACGGGTCTTGCTTGAGCACGGCCT
CAGCCTCCACGATGTTGTCGTTGTCCACCTGTACCTCCGCTCCATGGCTT
CCTTCGCCGCCGTCAACGCCGAATATTGCCGAGCACCCTTTCATCCGCAC
CACCCTCCTTCCCGCTCCTGTGTCGAACTTCCCTTGGCAAGGCCATACGA
TGACGAGGAAGCATGTAGGGGTTGGGAGGAGGTCGAGGTCCTGCTCGACG
TGATGGCCCTGGCCGGGTCGGGCGCCGCCATGGATGCAGGGTCTTTCCAA
CCTCGACAGGTGCTGCATGTGAAGAGCCTGTCGGGGTGGGCACCGGTGTG
TATCGGTCCTTACAGTCAAGCCAATCTTTTGAGCCACGGCCACCTCGCTT
TCCTCGCGGGGCAGATCGGTCTGGACCCGGCCACCATGGTGCTTGTCAAA
CCCCGTGACTTGGAGGCTTTCCAGGCTCTGTATAATTGTGCGCAGGTCTT
GCATGCGCTCCGAGCCTCCCTTCGGACGGTTTTGATGGTGGTGGTGTACG
TGCATGTGGACCAGAACGGGTATGAGTCGTTTTCCCCGGACCCCTCGGAA
TGGGAGGATGTCTGCCGCTTGGACGCTGGGTGGGGCCGAACCGGGACAGG
ACGCGCGGCCACAGGCGATAAGGGGGTCAATGATGCGAGCTACCAAGGCG
CCAATCGTTCAGATGGGGATGACAGCGATGAGGAACAGGATGGAGAGGAG
GACGAGGCGAACGAAGGCCAATGTCAAAGCAGCCCGTGCCCTATTTTTCT
CCCTGTGGGAGTACCCAACCTGCCTCGGGGCGCCGCGATTGAGTTCGAAG
TGGTAGCCCTGTCAACAGCTTTCGCTCAGGTGAAGTCACCGACGCGAAGG
GCGGAGCAGGGCCGGTTGGAGGATATTCTAGAGGAGAAGGACATGGGCGA
ATGCCCATTGCCCTTACCTTTTCAGCCGCCCGCTACTTTCGCTGCGCTGG
CGTCGAAAAACATGCCCCTTATGTCACGACCTCTCCTCTCCTATACCTGG
GAGGCTATCTTTGTACCATATGTCTTTAACTTCGTAAGCTTGTCTCTCTA
TCTTGACGACGACCTGGATGGCAGGAATGAAGGTGGGCAGAATGAGACCC
TCCTCCTGAATTACACTCATGTTGCCTACGCTTTGGTCGATCAATTAAGG
AAGATTCTGAGAGTTGCACACCTGACTTGGCAGCAACTTTCTCATCTGCG
TGTCTTTTACATTGCTACATGTTTGGACAACGAAGCGATGCTCAGAGAGG
CCTTGGCTGCCGCTTTGCCCAGTGACGGCCAGTGTGCCCGTACCTTTCTT
CCAGTCTCTAGTCTGATGTCTGAATGTCAAGAGGGCTCGAAAAGGCAGGA
TAGCTTGTTCCTCCGGGTCCAGGTTATTGCTTTGGATCTGGAAAAGTTGA
GGACAGAGGCCTGGGTGCACAGTGTACCAGACGGAGGCATGTAG back to topprotein sequence of rna5753 >rna5753-protein ID=rna5753-protein|Name=rna5753|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSE
SPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHR
VLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLR
YLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES back to topmRNA from alignment at CM002466.1:760992..763097+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5753 ID=rna5753|Name=rna5753|organism=Nannochloropsis gaditana|type=mRNA|length=2106bp|location=Sequence derived from alignment at CM002466.1:760992..763097+ (Nannochloropsis gaditana)
GGGACTTGCAGCGTCCTGCGTGGAACCCTCAATGCCTGCTGATGCCTTGG
CAGGTTGCAATACGTGCCTTGTCTCGCTTTTTCCTCAAGCTCCTGCCCGT
CTGGTGGTCTACGAACTGATGCCTCTCCTCTGTCCAACCTCCattcactc
cctctcctaaACGcggccctttcttccttccagccGAAGCCGTACGGGAA
AAGCACGTGAATAAGCATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGT
TGAAAAAGCTGTGGCGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAAC
CTGGCCATGATCGTCTTTTCAGCCTTGATGATATGGAAAGGACTCATGTT
TCTGACCAAGAGCGAGAGCCCGGTTGTGGTTGTTCTTAGGTAAATACCGG
TCGCGTGCAGTATAAGACGGGGCGGCATGGCTCGAACAGTTCCTTCTAAT
TTGGTTTCGAAAGGCACTTGTTAACGCATATTCTCTAATTTTGAGTCCTT
ATGTCCGCGCGCTCTGTGCGCtgtgcgggagggaaaaggcttgAAGTTAA
AGGGGAGGGTCTCAACCAACCAGGCGTGGCTGTGCCGCGAACTCACGCCA
GGACTGCATCCTCGTttcacctctttctcctgccccctcagTGGCTCTAT
GGAACCCGCGTTTCAAAGAGGGGATATCCTTTTCCTCAACAACCAAGACG
ATCCGATCCGTGTCGGTGAAATCGTCGTTTTTAAGATCAAGGATCGAGAC
ATTCCCATTGTCCACCGCGTATTGGAGGTACATCAAAAGTGAGTGGCGGc
cagggtgagggaggggaaagacgtGGTCCCGAGAGGAGGGCTCGCTGTTG
TTGTTACTCGTGATATTCATCATTCCCTCGTCCTGTTGGAAAGATGGCCT
TACGGGTGGCACGTGGTCGATTATGGGATGAGCACAAGGctagaaaggga
gaggaaggccacACACCGGATTCTTCCCGCATGTGTGCATTGAATTTCGC
CTTTCATGTCTTACACCCACGCCtacagggaggatgggaaggtggAGCTG
CTGACCAAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCC
TGGCCAGCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGT
GCGTGGACGGGATCAAGAAGGGGGTGCCGAATAGAAGAGGAGACCTctag
ggtggagggggtgttGTGACCtctcatttcttttctctttgtATGTAAGA
AAAGACGGTAACGAATGGAAGAGGGGTTACCCAcgctgggggagggcggg
gagacccCTCACATCGTTCCTCCCGACTTGAAGACATGAAGAAAAGTTGT
CGCGAAACGCAGGGGCCGTCACCATGTCCTGGATAGTCGCGTGACTCCGA
CACCTGGCCACTCATTATTGCCTTTTGATCTCATTACCACACAGGACGCT
ACGGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATGCTCA
AGTGAGTCCGGAGGCATGCTCTGGGGTCCAGGGCTGGGGCATGTCTTCCC
TGTGAATGAAGCATGTCGCaccgggaagagaggcacACAGCCTGTCATGT
TATATATTTCTGGCACGTCGTTCTCGTGCGTGTTCCCATCTTTATTTTCA
CTCTGGCCTTCTCGCGTCTCTAGATACGTCCTGGTCGGCATTATGGGTCT
CTTCGTGCTGACGAATAAAGAGGTAGGGGTGGAGAAAATATGATGGATCT
TGCTTTTGTTCTGCCATGGCTATTTGGTCCATGTATCTCATTTGTCGTGC
GCTGCGCTCGCCTTTGTCCCCCTCACAGAGCTGATGTTAGCCTGTGATCC
CGGAGTTTGGAGCTCGTCCACAAGCTTTGGGAAGACGGATGGAGGGACAT
ctagaaaggagagggatcaACGTTGGATCAATGGATCTGGATTGAGCTGC
AGAAATTTGGGGCTCAAATTGTGCATAAATCACCAAAGAAGAGGATCAAC
GATTGCACTGCATGGAAGGTGGAAGTAGACAGCAGACTGAGATAATGGAG
ATAAGAAGGGTAAAAGATAAAATTAATCACCCAAAAGGAAGCATCACTCC
ACGATG back to topCoding sequence (CDS) from alignment at CM002466.1:760992..763097+ >rna5753 ID=rna5753|Name=rna5753|organism=Nannochloropsis gaditana|type=CDS|length=3312bp|location=Sequence derived from alignment at CM002466.1:760992..763097+ (Nannochloropsis gaditana)
ATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAAAGCTGTGGCG
GTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCCATGATCGTCT
TTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGACCAAGAGCGAG
AGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCGCGTTTCAAAG
AGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATCCGTGTCGGTG
AAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCATTGTCCACCGC
GTATTGGAGGTACATCAAAAggaggatgggaaggtggAGCTGCTGACCAA
AGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCCTGGCCAGC
TGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGACGCTACGG
TATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATGCTCAAATA
CGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAATAAAGAGAGCT
GAATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAAAGCTGTGG
CGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCCATGATCGT
CTTTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGACCAAGAGCG
AGAGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCGCGTTTCAA
AGAGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATCCGTGTCGG
TGAAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCATTGTCCACC
GCGTATTGGAGGTACATCAAAAggaggatgggaaggtggAGCTGCTGACC
AAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCCTGGCCA
GCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGACGCTAC
GGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATGCTCAAA
TACGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAATAAAGAGAG
CTGAATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAAAGCTGT
GGCGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCCATGATC
GTCTTTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGACCAAGAG
CGAGAGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCGCGTTTC
AAAGAGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATCCGTGTC
GGTGAAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCATTGTCCA
CCGCGTATTGGAGGTACATCAAAAggaggatgggaaggtggAGCTGCTGA
CCAAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCCTGGC
CAGCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGACGCT
ACGGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATGCTCA
AATACGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAATAAAGAG
AGCTGAATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAAAGCT
GTGGCGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCCATGA
TCGTCTTTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGACCAAG
AGCGAGAGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCGCGTT
TCAAAGAGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATCCGTG
TCGGTGAAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCATTGTC
CACCGCGTATTGGAGGTACATCAAAAggaggatgggaaggtggAGCTGCT
GACCAAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCCTG
GCCAGCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGACG
CTACGGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATGCT
CAAATACGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAATAAAG
AGAGCTGAATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAAAG
CTGTGGCGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCCAT
GATCGTCTTTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGACCA
AGAGCGAGAGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCGCG
TTTCAAAGAGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATCCG
TGTCGGTGAAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCATTG
TCCACCGCGTATTGGAGGTACATCAAAAggaggatgggaaggtggAGCTG
CTGACCAAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCCCC
TGGCCAGCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGGGA
CGCTACGGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCATG
CTCAAATACGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAATAA
AGAGAGCTGAATGGAAGAAATTGTGCAAGGCCAACTTTCCGAGTTGAAAA
AGCTGTGGCGGTCCCCGCGGATGCTTCTTTCGCAGTCCTTGAACCTGGCC
ATGATCGTCTTTTCAGCCTTGATGATATGGAAAGGACTCATGTTTCTGAC
CAAGAGCGAGAGCCCGGTTGTGGTTGTTCTTAGTGGCTCTATGGAACCCG
CGTTTCAAAGAGGGGATATCCTTTTCCTCAACAACCAAGACGATCCGATC
CGTGTCGGTGAAATCGTCGTTTTTAAGATCAAGGATCGAGACATTCCCAT
TGTCCACCGCGTATTGGAGGTACATCAAAAggaggatgggaaggtggAGC
TGCTGACCAAAGGGGACAACAATCGAGTAGGGGACCGGGGCTTGTACGCC
CCTGGCCAGCTGTGGCTGAATCGCGAAGACATCCTTGGGCGAGCCGCAGG
GACGCTACGGTATTTGGGTATGGTGACCATCATCCTCAACGACTACCCCA
TGCTCAAATACGTCCTGGTCGGCATTATGGGTCTCTTCGTGCTGACGAAT
AAAGAGAGCTGA back to top
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