EWM24942.1, cds5738 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|585106572|gb|EWM24942.1| (signal peptidase complex catalytic subunit sec11c [Nannochloropsis gaditana]) HSP 1 Score: 368.622 bits (945), Expect = 5.320e-129 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 Query: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES Sbjct: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|553180765|ref|XP_005853458.1| (signal peptidase, endoplasmic reticulum-type [Nannochloropsis gaditana CCMP526] >gi|422295602|gb|EKU22901.1| signal peptidase, endoplasmic reticulum-type [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 343.199 bits (879), Expect = 2.677e-116 Identity = 167/173 (96.53%), Postives = 168/173 (97.11%), Query Frame = 0 Query: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIM 173 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLK + M Sbjct: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKTSIAAAM 173
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|676388195|ref|XP_009037376.1| (hypothetical protein AURANDRAFT_27033 [Aureococcus anophagefferens] >gi|323452139|gb|EGB08014.1| hypothetical protein AURANDRAFT_27033 [Aureococcus anophagefferens]) HSP 1 Score: 309.686 bits (792), Expect = 1.311e-105 Identity = 155/192 (80.73%), Postives = 167/192 (86.98%), Query Frame = 0 Query: 3 EIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGR-----------AAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183 EIV Q+ ELKKLW++ R+LL Q LNLAMIVFSALMIWKGLMF+TKSESPVVVVLSGSMEPAFQRGDILFLNNQD+PIRVGE+VVFKIKDRDIPIVHRV++VH+K DG VELLTKGDNNRV DRGLYAPGQLWL RED+LGR A GTLRY+GMVTIILNDYP LKYVLV IMGLFVLTNKE Sbjct: 2 EIVDQQIFELKKLWKNKRLLLHQGLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHRVMKVHEKADGAVELLTKGDNNRVDDRGLYAPGQLWLAREDVLGRAIRGGNKMIQGAIGTLRYVGMVTIILNDYPALKYVLVSIMGLFVLTNKEE 193
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|224009546|ref|XP_002293731.1| (microsomal signal peptidase [Thalassiosira pseudonana CCMP1335] >gi|220970403|gb|EED88740.1| microsomal signal peptidase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 293.893 bits (751), Expect = 1.541e-99 Identity = 144/179 (80.45%), Postives = 160/179 (89.39%), Query Frame = 0 Query: 4 IVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 ++ Q+ ELKKLW + R L Q LNLAMIVFSALMIWKGLMF+TKSESPVVVVLSGSMEPAFQRGDILFLNN + + VG++VVFKIKDRDIPIVHR+L+VH+K DG VELLTKGDNNRV DRGLYAPGQLWL REDILGRA GTLRY+GMVTI LNDYP+LKYVLVG+MGLFVLT+KE Sbjct: 1 MIDKQVIELKKLWANKRQLTFQLLNLAMIVFSALMIWKGLMFMTKSESPVVVVLSGSMEPAFQRGDILFLNNSVEKVYVGDVVVFKIKDRDIPIVHRILKVHEKPDGHVELLTKGDNNRVDDRGLYAPGQLWLEREDILGRAVGTLRYVGMVTIALNDYPVLKYVLVGMMGLFVLTSKE 179
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|1210524708|dbj|GAX16608.1| (signal peptidase, endoplasmic reticulum-type [Fistulifera solaris]) HSP 1 Score: 289.271 bits (739), Expect = 9.198e-98 Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 0 Query: 8 QLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVH-QKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 Q+ ELKKLW + R L Q LNLAMIVFSALMIWKGLMF+TKSESPVVVVLSGSMEPAFQRGDILFLNN + VG++VVFKIKDRDIPIVHR+L+VH +E GKVELLTKGDNNRV DRGLYAPGQLWLNR+DILG+A GTLRY+GMVTI LNDYP+LKYVLVG+MGLFVLT+KE Sbjct: 4 QVYELKKLWSNKRQLTFQVLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNAVHEVHVGDVVVFKIKDRDIPIVHRILKVHLDQETGKVELLTKGDNNRVDDRGLYAPGQLWLNRDDILGKAVGTLRYVGMVTIALNDYPVLKYVLVGLMGLFVLTSKE 179
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|299473413|emb|CBN77811.1| (Sec11 homolog, catalytic subunit of the Signal Peptidase Complex [Ectocarpus siliculosus]) HSP 1 Score: 286.96 bits (733), Expect = 9.649e-97 Identity = 138/183 (75.41%), Postives = 159/183 (86.89%), Query Frame = 0 Query: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183 M + V Q+ ELKKLW + R L Q LNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFL+N D+P+R GE+VVFKIKDR+IPIVHRV+ VH+K DG + +LTKGD+N+V DRGLY PGQ+WL+REDILGRA GTLRY+GMVTIILNDYP LKYVLVG+MGLFVLTN+E+ Sbjct: 1 MVDFVDKQVDELKKLWHNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 183
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|219130256|ref|XP_002185285.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403200|gb|EEC43154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 281.182 bits (718), Expect = 1.804e-94 Identity = 139/183 (75.96%), Postives = 161/183 (87.98%), Query Frame = 0 Query: 1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDG-KVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 +++I+ Q+ ELKKLW + R L Q LNLAMIVFSALMIWKGLMF+T+SESPVVVVLSGSMEPAFQRGDILFL+N + VG++VVFKIKDRDIPIVHR+L+VH D +V+LLTKGDNNRV DRGLYAPGQLWLNR+DILG+A GTLRY+GMVTI LNDYP+LKYVLVG+MGLFVLT+KE Sbjct: 2 IKDILDKQVFELKKLWANKRQLTFQVLNLAMIVFSALMIWKGLMFVTQSESPVVVVLSGSMEPAFQRGDILFLHNAVREVHVGDVVVFKIKDRDIPIVHRILKVHLDTDTFQVDLLTKGDNNRVDDRGLYAPGQLWLNRDDILGKAVGTLRYVGMVTIALNDYPVLKYVLVGMMGLFVLTSKE 184
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|1210511827|dbj|GAX29067.1| (signal peptidase, endoplasmic reticulum-type [Fistulifera solaris]) HSP 1 Score: 276.174 bits (705), Expect = 1.405e-92 Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 0 Query: 8 QLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVH-QKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 Q+ ELKKLW + R L Q LNLAMIVFSALMIWKGLMF+TKSESPVVVVLSGSMEPAFQRGDILFLNN + VG++VVFKIKDRDIPIVHR+L+VH +E GKVELLTKGDNNRV DRGLYAPGQLWLNR+DILG+A GTLRY+GMVTI LNDYP+LKYVLVG+MGLFVLT+KE Sbjct: 4 QVYELKKLWSNKRQLTFQVLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNAVHDVHVGDVVVFKIKDRDIPIVHRILKVHLDQETGKVELLTKGDNNRVDDRGLYAPGQLWLNRDDILGKAVGTLRYVGMVTIALNDYPVLKYVLVGLMGLFVLTSKE 179
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|1072231294|gb|OEU16026.1| (signal peptidase I [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 275.018 bits (702), Expect = 5.122e-92 Identity = 142/175 (81.14%), Postives = 155/175 (88.57%), Query Frame = 0 Query: 8 QLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 Q+ ELKKLW + R LL Q LNLAMIVFSALMIWK LM TKSESPVVVVLSGSMEPAFQRGDILFLNN D + VG++VVFKIKDRDIPIVHR+L+VH+ DGKVELLTKGDNNRV DRGLYAPGQLWL REDILG+ GTLRY+GMVTI LNDYP+LKYVLVG+MGLFVLT+KE Sbjct: 5 QVIELKKLWANKRQLLFQLLNLAMIVFSALMIWKALMCYTKSESPVVVVLSGSMEPAFQRGDILFLNNSVDQVGVGDVVVFKIKDRDIPIVHRILKVHEDSDGKVELLTKGDNNRVDDRGLYAPGQLWLEREDILGKCVGTLRYVGMVTIALNDYPVLKYVLVGMMGLFVLTSKE 179
BLAST of EWM24942.1 vs. NCBI_GenBank
Match: gi|873223927|emb|CEM27628.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 245.358 bits (625), Expect = 2.682e-80 Identity = 120/180 (66.67%), Postives = 139/180 (77.22%), Query Frame = 0 Query: 3 EIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKE 182 + V+ E + L+ PR + Q LNL IVFSALM+WKGLM +T SESPVVVVLSGSMEP F RGDILFLNN D P+ G++VVFKIK RDIPIVHRVLEVH+ G V++LTKGDNN V DRGLYAPGQLWLN+ DI+GRA L Y+GMVTI LNDYP LK+VLVG MG FV+ +E Sbjct: 2 DTVRQYWDEFRALFSKPRQFVQQILNLCCIVFSALMLWKGLMVITGSESPVVVVLSGSMEPGFYRGDILFLNNPDTPVLPGDVVVFKIKGRDIPIVHRVLEVHETGKGDVKILTKGDNNDVDDRGLYAPGQLWLNKSDIMGRAIAFLPYVGMVTIWLNDYPWLKFVLVGTMGFFVIIGRE 181 The following BLAST results are available for this feature:
BLAST of EWM24942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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