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Properties
| Property Name | Value |
|---|
| Product | myb-like dna-binding domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100086g13.3848.mrna |
| Orig protein id | gnl|cribi|Naga_100086g13.3848 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:750185..753747 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5749 ID=rna5749|Name=rna5749|organism=Nannochloropsis gaditana|type=mRNA|length=922bp
AGAGACACATAAAACGATGACCCAACAGCCTGAACATCGCTTTCATTTCT
ATGGATATCATACATGCGGATGTTGCCGATGGTTAAAAGAGGACCGAACG
TCATTCATGACCATGTACGAGTGTGCATGTGTCGTCCTCCTCCATTTTGA
GGCCCCAGGCGGACCTCGGACTTGTCCTCTCTAAAATTCATCGTGTTCCA
CCACCGAGGCCCTCCCAGGACACACTGTACACAAATCAATCAGCTAGAAT
ACGCTTGGACGCATGACAAACCGCGGCAGGCTACGACCTTGCCCGGTGTC
CACGTCACGGGAAACTCGTGCGTACACGCGTCCAAGTACTATGCAGGGAC
GTCGCCGCTTCCAACGCGACGCTCCTTTCGTTTCAACTTAACGACGTCGT
CAACTTCGCTCAACATTACGGCCGCCTCTCACATTGCAGACGCGCGCGAA
GGCGCAACAAGACGAGGCAATCCTCCGAAAATTATTCGACGGACATGACA
GGGCACGGCAGGGGTCATTATTCGCGGGGGGCAAAGAGATACACACATTG
TTCTTCAACATGGATTCATGCATGCAAATCCATCGCCCTGAGGCCCTGCA
TGGGTGCCTGCTATCCATTGTCCTAAAAAAGACGTCGGCAGAAATTGACC
GGACGAAGGGCATGCCTCCAGTAAAGTTTTTACAAATATCACACAAAATT
TACTTTTGCGCGTTTATGTTAGACCAGTTGTGTTGGGATTGGTCATTATT
AAAAAAAACAGTTGGCATGACATTCTGCGTGACCAGAAGCCATGGCCCAC
GTCCAAATCATGCCTCGAGACACTGTGTTCGGGCGAAGCTTGTTCAGCAT
GTGTACAAAGGATATATGCATGCTATAAGAGAGAGCATGCGTGGCTTTTT
TGTAACATCTCTTTGTTTTTGA back to topprotein sequence of rna5749 >rna5749-protein ID=rna5749-protein|Name=rna5749|organism=Nannochloropsis gaditana|type=polypeptide|length=755bp
MEENHDHLLQAPKAAIGYEDNLEGGRGGRKGRVQVHGGGLRTTMSTVASV
GEGLKRRASGKPEKPRQGALHDPLGHDDDDAFRELDECFHNADGLMPRVS
REEDLVYLGGKGGPALFALHHQGQAGMSPPLHESGDLNVSGSEGEKLSNR
GVFLTGKEAAKLRSREPRAGDTVSRGETGGDIHRTESASSDQTSGCDSHA
SSISTGATALSKKRPWKPEEDEYLRALVHRQGARDWGQIAEHFENRNGKQ
CHQRWNYFLSPTVHSGAWTAEEDEKIVNFQCLLGNKWARIATHIPGRTGH
AVKNRAHQIANKIRKRERKPARSQGWVEGKGGAGGRGKKTGSSHASPAVD
GARSTRRAQGYPNLNPDLFPGPTAGALAQGGEEDSVTEACSGSDSGGGTT
CSTTSSSSSSAVAAPGHTPGSGHNHHHHHHHHHHHLHPEDVAETAGPLGM
GKALSGGVQGAGKTKIPPETHGRGGSSAFISASLGPPVASTAPKRASPPS
REEHVPALDTAEESLPGESPCAATALSSTALSLAVPLTVGGVQHFLTAQR
ALAQHRGEERQWADGTDVPPILYHEGVAYVPVATTTLPSPCGPPPSASSV
KSPTVGQAGPMRAWEAAKKNVICLERLTEHQALMQHHLRLQQQRLTMERR
REEAVVNEACGLVDLDGLPVADHEQESAGSGGARNIIHHHHHDDEQQEQD
EDEEAEAKVEAEVGGLDLLHRHYHHHHHHHHPAGGGDEEEEDLAIVPPTF
EEDGL back to topmRNA from alignment at CM002466.1:750185..753747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5749 ID=rna5749|Name=rna5749|organism=Nannochloropsis gaditana|type=mRNA|length=3563bp|location=Sequence derived from alignment at CM002466.1:750185..753747+ (Nannochloropsis gaditana)
CGTTGGAAGCGGCGACGTCCCTGCATAGTACTTGGACGCGTGTACGCACG
AGTTTCCCGTGACGTGGACACCGGGCAAGGTCGTAGCCTGCCGCGGTTTG
TCATGCGTCCAAGCGTATTCTAGCTGATTGATTTGTGTACAGTGTGTCCT
GGGAGGGCCTCGGTGGTGGAACACGATGAATTTTAGAGAGGACAAGTCCG
AGGTCCGCCTGGGGCCtcaaaatggaggaggacgacacaTGCACACTCGT
ACATGGTCATGAATGACGTTCGGTCCTCTTTTAACCATCGGCAACATCCG
CATGTATGATATCCATAGAAATGAAAGCGATGTTCAGGCTGTTGGGTCAT
CGTTTTATGTGTCTCTGGAAACCCGGTGGACAACTCGATTGCTCGGACTT
TCCATGTGAGGAAATCCCTCAACCGAAATTTTAGGAGCCTTGAGCATCCG
TCCATACGGGCTGGCCTCTTTAGATACTTTCGACAATCGTAGGACAACAA
ATTTCAATGGTATATCTTGATCCATCTTTTCATCCACGGCAATTAGGCGC
GAAACCCGGCCCCAGGAGGGCTTTATTCGCGGCGAGGACCCTGGCATGGG
AAGGCGAAACTTTGAATGAGGAGCGTGGCCTGAAGAGAGAAGGCCTGGAA
ACCGTGTGATGCAACGTGGTAAAACGCACCCTCTGTGATTCCTGAGAGTG
GAACGTCGGTATTCACCAGCAGTGCTGAGCGGGACCAGGGTGGGGGGTGC
GGGCTAGCGTCGAGTTTTCTCAACGGAGAGGGGGCATGGAAGAAAATCAT
GACCATCTACTGCAGGCGCCCAAAGCTGCAATTGGCTACGAAGATAACTT
GGAggggggtcgaggaggacgtaAGGGTCGTGTTCAAGTGCATGGGGGAG
GGCTTCGGACCACGATGTCCACGGTGGCCTCTGTTGGAGAAGGCTTGAAG
CGACGGGCGTCGGGGAAGCCAGAGAAGCCCAGACAAGGAGCTTTGCACGA
CCCCTTGGGCCACGACGATGATGATGCTTTCCGTGAACTGGACGAATGTT
TCCACAACGCTGACGGGCTGATGCCCCGGGTATCTCGGGAAGAGGACTTG
GTCTATctcgggggaaaaggaggccctGCTCTGTTCGCGCTCCACCACCA
AGGTCAGGCGGGCATGTCTCCTCCGTTGCATGAGAGTGGAGACTTAAACG
TGtccgggagcgagggcgaaAAGCTCTCGAATCGCGGTGTCTTTCTCAca
ggcaaggaggcggcAAAGCTCCGGTCCCGGGAGCCACGCGCCGGAGACAC
CGTGTCGAGAGGAGAGACCGGAGGGGACATCCACCGTACGGAAAGTGCCT
CGAGTGACCAAACTTCCGGCTGCGACAGCCATGCCAGCAGCATCAGCACG
GGGGCTACGGCACTGAGCAAGAAGCGGCCGTggaagccggaggaggatga
gtaCTTGCGCGCTTTGGTTCACCGTCAAGGCGCGCGGGACTGGGGCCAGA
TTGCGGAACATTTTGAGAATCGGAACGGAAAGCAATGCCACCAGCGTTGG
AACTACTTTTTGAGCCCCACGGTTCACTCTGGGGCCTGgaccgcggagga
ggacgagaagatcGTGAATTTCCAATGTCTTCTCGGCAATAAGTGGGCGC
GAATTGCTACCCATATACCCGGACGTACGGGGCACGCAGTGAAAAACCGG
GCCCACCAGATTGCGAACAAGATTAGGAAACGCGAGCGGAAACCTGCGCG
AAGCCAGGggtgggtggaagggaagggaggggcgggagggaggggcaaga
agaCGGGGTCAAGCCACGCGTCGCCGGCCGTCGACGGAGCGAGGAGCACC
AGGCGCGCGCAGGGTTACCCTAATCTGAACCCTGACCTTTTCCCGGGCCC
CACGGCGGGAGCTTtggcgcagggaggagaggaggactcTGTGACGGAGG
CATGCTCCGGCAGCGATTCAGGCGGTGGCACGACTTgctcgaccacgtcc
tcctcctcctcctcggcggtTGCGGCCCCAGGTCACACCCCGGGATCCGG
GCAtaaccaccaccaccaccaccaccaccaccaccaccacctccatcctg
AGGATGTTgcggagacggcggggcCTCTGGGAATGGGCAAGGCACTGTCG
GGGGGGGTCCAGGGAGCCGGGAAGACGAAGATACCACCCGAGACCCACGG
TCGGGGGGGCAGTTCTGCCTTTATAAGTGCGTCTCTTGGCCCTCCTGTCG
CTTCGACAGCGCCAAAAAGGGCCAGTCCTCCAAGCAGAGAGGAGCATGTC
CCCGCACTGGATACTGCGGAAGAGAGCTTACCCGGGGAGAGCCCGTGTGC
GGCCACGGCACTGTCGTCGACGGCtctctccctggccgtgcCTCTGACCG
TGGGTGGCGTACAGCATTTCCTCACGGCGCAACGTGCGCTTGCCCAGCAC
AGAGGAGAAGAACGGCAGTGGGCAGACGGGACCGACGTGCCTCCCATCTT
GTACCATGAAGGCGTGGCCTACGTCCCTGTCGCGaccaccacccttccct
ccccttgtggccctccaccctctgcgTCGTCGGTCAAGTCCCCGACAGTC
GGCCAGGCGGGCCCGATGCGTGCCTGGGAAGCGGCTAAGAAGAACGTCAT
TTGCCTAGAGCGTCTGACCGAGCACCAGGCGCTCATGCAACATCACCTTC
GCCTCCAGCAGCAACGGTTGACGATGGAACGTCGACGTGAGGAAGCAGTG
GTGAATGAGGCTTGTGGCCTGGTGGATCTAGACGGCTTGCCAGTCGCAGA
CCATGAGCAGGAGAGCGCAGGGTCCGGCGGGGCCCGAAACATCAtacatc
accaccaccacgacgATGaacagcaggagcaggatgaggacgaggaagcg
gaggcgaaggtggaggcggaagtgGGGGGTTTGGACTTGCTACACCGTCA
CTATcatcaccaccatcaccaccatcatcctgctggagggggggacgagg
aggaggaggacctggccATCGTGCCTCCCACATTCGAGGAGGATGGACTG
TAATGTTCCTGGTGAGAGTGGCAAATAGAATGCCTCAGGAAGAGAGATGG
CTCGAGAAAGGCGTCGGCGCGGgtagggagaagaggggaaagcttTGTTT
AGAACGTATTAGACGTCTAGAGGTACCGGCTTGCACCCTTAGGCATGTTG
GTGAGAGGCTTGTCACGCCCTTGCGTGCACACATGAAGGAACAAGGCAAT
TAAATTAGAGGCTATGGAAACGCAAACTGGAGGTCGACAGACAGCATGCA
GCTGAAATCTGTGAGAACTCGTGACTGAGAGCGAAATGTAGGAGTCGCGA
CACAGGATGCATTGAGTGACAGCGTGCGTGCAAGAAACATCGCTATAGCT
CGCCATTAACAATGACGCGAATCTAAGATGGAGGTCTTATGTAAGGCTTA
AGGATAAATTGTGATAGCCTTCGCGCGGATGTCATTCAAAGGAAAGAAGC
TCATAAATATCGAGGGCTAGCTAACGGGTAAAGAATTTAATACACAAGTA
AATATTCGCTTCC back to topCoding sequence (CDS) from alignment at CM002466.1:750185..753747+ >rna5749 ID=rna5749|Name=rna5749|organism=Nannochloropsis gaditana|type=CDS|length=2268bp|location=Sequence derived from alignment at CM002466.1:750185..753747+ (Nannochloropsis gaditana)
ATGGAAGAAAATCATGACCATCTACTGCAGGCGCCCAAAGCTGCAATTGG
CTACGAAGATAACTTGGAggggggtcgaggaggacgtaAGGGTCGTGTTC
AAGTGCATGGGGGAGGGCTTCGGACCACGATGTCCACGGTGGCCTCTGTT
GGAGAAGGCTTGAAGCGACGGGCGTCGGGGAAGCCAGAGAAGCCCAGACA
AGGAGCTTTGCACGACCCCTTGGGCCACGACGATGATGATGCTTTCCGTG
AACTGGACGAATGTTTCCACAACGCTGACGGGCTGATGCCCCGGGTATCT
CGGGAAGAGGACTTGGTCTATctcgggggaaaaggaggccctGCTCTGTT
CGCGCTCCACCACCAAGGTCAGGCGGGCATGTCTCCTCCGTTGCATGAGA
GTGGAGACTTAAACGTGtccgggagcgagggcgaaAAGCTCTCGAATCGC
GGTGTCTTTCTCAcaggcaaggaggcggcAAAGCTCCGGTCCCGGGAGCC
ACGCGCCGGAGACACCGTGTCGAGAGGAGAGACCGGAGGGGACATCCACC
GTACGGAAAGTGCCTCGAGTGACCAAACTTCCGGCTGCGACAGCCATGCC
AGCAGCATCAGCACGGGGGCTACGGCACTGAGCAAGAAGCGGCCGTggaa
gccggaggaggatgagtaCTTGCGCGCTTTGGTTCACCGTCAAGGCGCGC
GGGACTGGGGCCAGATTGCGGAACATTTTGAGAATCGGAACGGAAAGCAA
TGCCACCAGCGTTGGAACTACTTTTTGAGCCCCACGGTTCACTCTGGGGC
CTGgaccgcggaggaggacgagaagatcGTGAATTTCCAATGTCTTCTCG
GCAATAAGTGGGCGCGAATTGCTACCCATATACCCGGACGTACGGGGCAC
GCAGTGAAAAACCGGGCCCACCAGATTGCGAACAAGATTAGGAAACGCGA
GCGGAAACCTGCGCGAAGCCAGGggtgggtggaagggaagggaggggcgg
gagggaggggcaagaagaCGGGGTCAAGCCACGCGTCGCCGGCCGTCGAC
GGAGCGAGGAGCACCAGGCGCGCGCAGGGTTACCCTAATCTGAACCCTGA
CCTTTTCCCGGGCCCCACGGCGGGAGCTTtggcgcagggaggagaggagg
actcTGTGACGGAGGCATGCTCCGGCAGCGATTCAGGCGGTGGCACGACT
TgctcgaccacgtcctcctcctcctcctcggcggtTGCGGCCCCAGGTCA
CACCCCGGGATCCGGGCAtaaccaccaccaccaccaccaccaccaccacc
accacctccatcctgAGGATGTTgcggagacggcggggcCTCTGGGAATG
GGCAAGGCACTGTCGGGGGGGGTCCAGGGAGCCGGGAAGACGAAGATACC
ACCCGAGACCCACGGTCGGGGGGGCAGTTCTGCCTTTATAAGTGCGTCTC
TTGGCCCTCCTGTCGCTTCGACAGCGCCAAAAAGGGCCAGTCCTCCAAGC
AGAGAGGAGCATGTCCCCGCACTGGATACTGCGGAAGAGAGCTTACCCGG
GGAGAGCCCGTGTGCGGCCACGGCACTGTCGTCGACGGCtctctccctgg
ccgtgcCTCTGACCGTGGGTGGCGTACAGCATTTCCTCACGGCGCAACGT
GCGCTTGCCCAGCACAGAGGAGAAGAACGGCAGTGGGCAGACGGGACCGA
CGTGCCTCCCATCTTGTACCATGAAGGCGTGGCCTACGTCCCTGTCGCGa
ccaccacccttccctccccttgtggccctccaccctctgcgTCGTCGGTC
AAGTCCCCGACAGTCGGCCAGGCGGGCCCGATGCGTGCCTGGGAAGCGGC
TAAGAAGAACGTCATTTGCCTAGAGCGTCTGACCGAGCACCAGGCGCTCA
TGCAACATCACCTTCGCCTCCAGCAGCAACGGTTGACGATGGAACGTCGA
CGTGAGGAAGCAGTGGTGAATGAGGCTTGTGGCCTGGTGGATCTAGACGG
CTTGCCAGTCGCAGACCATGAGCAGGAGAGCGCAGGGTCCGGCGGGGCCC
GAAACATCAtacatcaccaccaccacgacgATGaacagcaggagcaggat
gaggacgaggaagcggaggcgaaggtggaggcggaagtgGGGGGTTTGGA
CTTGCTACACCGTCACTATcatcaccaccatcaccaccatcatcctgctg
gagggggggacgaggaggaggaggacctggccATCGTGCCTCCCACATTC
GAGGAGGATGGACTGTAA back to top
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